CuGenDBv2

Gene ID	Tan0009803
Organism	Trichosanthes anguina (Snake gourd v1)
Description	ATP synthase subunit epsilon, mitochondrial-like
Genome location	LG06:635023..637432
RNA-Seq Expression	Tan0009803
Synteny	Tan0009803
Gene Ontology terms	GO:0042776 - mitochondrial ATP synthesis coupled proton transport (biological process) GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) (cellular component) GO:0016787 - hydrolase activity (molecular function) GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
InterPro domains	IPR006721 - ATP synthase, F1 complex, epsilon subunit, mitochondrial IPR036742 - ATP synthase, F1 complex, epsilon subunit superfamily, mitochondrial

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7025938.1 ATP synthase subunit epsilon, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]

6.8e-30

91.43

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Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEVLGREKVHFSISKWAEGKPQKPTLRSDNPEA
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLK+PYKTEVL REKVHFSISKW +GKPQKP +RSDNPEA
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEVLGREKVHFSISKWAEGKPQKPTLRSDNPEA

XP_022147265.1 ATP synthase subunit epsilon, mitochondrial [Momordica charantia]

2.3e-30

94.29

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Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEVLGREKVHFSISKWAEGKPQKPTLRSDNPEA
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYK EVL REKVHFSISKWA+GKPQKPTLRSD PEA
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEVLGREKVHFSISKWAEGKPQKPTLRSDNPEA

XP_022964126.1 ATP synthase subunit epsilon, mitochondrial-like [Cucurbita moschata]

2.3e-30

92.86

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Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEVLGREKVHFSISKWAEGKPQKPTLRSDNPEA
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLK+PYKTEVL REKVHFSISKWA+GKPQKP +RSDNPEA
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEVLGREKVHFSISKWAEGKPQKPTLRSDNPEA

XP_023000286.1 ATP synthase subunit epsilon, mitochondrial-like [Cucurbita maxima]

3.1e-30

92.86

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Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEVLGREKVHFSISKWAEGKPQKPTLRSDNPEA
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLK+PYKTEVL REKVHFSISKWA+GKPQKP +RSDNPEA
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEVLGREKVHFSISKWAEGKPQKPTLRSDNPEA

XP_038896825.1 ATP synthase subunit epsilon, mitochondrial [Benincasa hispida]

2.3e-30

92.86

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Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEVLGREKVHFSISKWAEGKPQKPTLRSDNPEA
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEVL REKVHFS+SKW +GKPQKPTLRSD PEA
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEVLGREKVHFSISKWAEGKPQKPTLRSDNPEA

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CGH8 ATP synthase subunit epsilon, mitochondrial

9.6e-30

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Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEVLGREKVHFSISKWAEGKPQKPTLRSDNPEA
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKT+VL REKVHFS+SKW +GKPQKPT+RSD PEA
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEVLGREKVHFSISKWAEGKPQKPTLRSDNPEA

A0A5D2I2U3 Uncharacterized protein

1.3e-29

91.3

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Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEVLGREKVHFSISKWAEGKPQKPTLRSDNPE
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTE L REKVHFSISKW +GKP+KPTLRSD+PE
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEVLGREKVHFSISKWAEGKPQKPTLRSDNPE

A0A6J1CZN8 ATP synthase subunit epsilon, mitochondrial

1.1e-30

94.29

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Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEVLGREKVHFSISKWAEGKPQKPTLRSDNPEA
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYK EVL REKVHFSISKWA+GKPQKPTLRSD PEA
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEVLGREKVHFSISKWAEGKPQKPTLRSDNPEA

A0A6J1HI26 ATP synthase subunit epsilon, mitochondrial-like

1.1e-30

92.86

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Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEVLGREKVHFSISKWAEGKPQKPTLRSDNPEA
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLK+PYKTEVL REKVHFSISKWA+GKPQKP +RSDNPEA
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEVLGREKVHFSISKWAEGKPQKPTLRSDNPEA

A0A6J1KFG7 ATP synthase subunit epsilon, mitochondrial-like

1.5e-30

92.86

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Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEVLGREKVHFSISKWAEGKPQKPTLRSDNPEA
        MASNAAVPFWRAAGMTYITYSNICANLVRNCLK+PYKTEVL REKVHFSISKWA+GKPQKP +RSDNPEA
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEVLGREKVHFSISKWAEGKPQKPTLRSDNPEA

SwissProt top hits

e value

%identity

Alignment

Q06450 ATP synthase subunit epsilon, mitochondrial

1.0e-28

81.16

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Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEVLGREKVHFSISKWAEGKPQKPTLRSDNPE
        MASNAAVPFWRAAGMTYITYSN+CAN+VRNCLKEPY+ E L REKVHFS SKW +GKPQKP +RSD  E
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEVLGREKVHFSISKWAEGKPQKPTLRSDNPE

Q41898 ATP synthase subunit epsilon, mitochondrial

5.8e-24

72.06

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Query:  ASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEVLGREKVHFSISKWAEGKPQKPTLRSDNPE
        A+ AAVPFWRAAGMTYI YSNICA LVRNCLKEP+K+E   REKVHFSISKW +GK +KPT+R+++ +
Subjt:  ASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEVLGREKVHFSISKWAEGKPQKPTLRSDNPE

Q75JK6 ATP synthase subunit epsilon, mitochondrial

3.8e-07

46.94

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Query:  FWRAAGMTYITYSNICANLVRNCLKEPYKTEVLGREKVHFSISKWAEGK
        +WRAAG+TY+ Y+NIC   VRNCLKEP++     RE    +   +  GK
Subjt:  FWRAAGMTYITYSNICANLVRNCLKEPYKTEVLGREKVHFSISKWAEGK

Q96253 ATP synthase subunit epsilon, mitochondrial

5.4e-30

85.51

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Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEVLGREKVHFSISKWAEGKPQKPTLRSDNPE
        MASNAAVPFWRAAGMTYI+YSNICAN+VRNCLKEP+K E L REKVHFS+SKWA+GKPQKP LRSD PE
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEVLGREKVHFSISKWAEGKPQKPTLRSDNPE

Q9VXN2 Protein stunted

1.7e-07

41.38

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Query:  WRAAGMTYITYSNICANLVRNCLKEPYKTEVLGREKVHFSISKWAEGKPQKPTLRSDN
        WRAAG+TYI YSNI A ++R  LK   + +   R+  H   + WA GKP +   +S++
Subjt:  WRAAGMTYITYSNICANLVRNCLKEPYKTEVLGREKVHFSISKWAEGKPQKPTLRSDN

Arabidopsis top hits

e value

%identity

Alignment

AT1G51650.1 ATP synthase epsilon chain, mitochondrial

3.8e-31

85.51

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Query:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEVLGREKVHFSISKWAEGKPQKPTLRSDNPE
        MASNAAVPFWRAAGMTYI+YSNICAN+VRNCLKEP+K E L REKVHFS+SKWA+GKPQKP LRSD PE
Subjt:  MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEVLGREKVHFSISKWAEGKPQKPTLRSDNPE

Sequences

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CDS sequence

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ATGGCTTCGAACGCAGCAGTGCCCTTTTGGAGAGCGGCGGGGATGACATACATCACATACTCAAACATTTGCGCTAATCTGGTCAGGAACTGTCTCAAGGAGCCTTACAA
GACCGAAGTTCTCGGCCGCGAGAAGGTTCACTTTTCCATTTCCAAGTGGGCGGAAGGCAAACCCCAAAAGCCCACTCTTCGGTCGGACAATCCTGAGGCGTGA

mRNA sequence

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AGTGAGAGAGAATAGAGGCATTTGATTTTGGCACAGAGCTAGAGAGACAAAGTTGCAGAGAAATGGCTTCGAACGCAGCAGTGCCCTTTTGGAGAGCGGCGGGGATGACA
TACATCACATACTCAAACATTTGCGCTAATCTGGTCAGGAACTGTCTCAAGGAGCCTTACAAGACCGAAGTTCTCGGCCGCGAGAAGGTTCACTTTTCCATTTCCAAGTG
GGCGGAAGGCAAACCCCAAAAGCCCACTCTTCGGTCGGACAATCCTGAGGCGTGAAGGTGGTAGGGAGTTGATTTCTTGAAGGTGCTTCTGTCTTTATATCAACATTTGT
AGGCTTGAATCACTTATTTGAATCAAACCTTTTATGGAGATGGATTGATGAATCTCTGGGATTTCCATGGGTTTGCTAATGTAATAAATCTTTGCTATTAATCCACTATG
AAGTGTTTTTTTTTGGGCTTGATTTTGCCATGAACATCTATTTTGTATCCTCCAACTTTTCACAACATGCAATTGAATAATTTCTCTCGT

Protein sequence

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MASNAAVPFWRAAGMTYITYSNICANLVRNCLKEPYKTEVLGREKVHFSISKWAEGKPQKPTLRSDNPEA

Tan0009803 (gene) of Snake gourd v1 genome