; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0009819 (gene) of Snake gourd v1 genome

Gene IDTan0009819
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG04:8433745..8435252
RNA-Seq ExpressionTan0009819
SyntenyTan0009819
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A0A0KQY6 Uncharacterized protein1.8e-2248.91Show/hide
Query:  MTPGVPPFDGDP-ATSFTNLLSPRH---HHPTVLNSSISHHPTTLPIPSRV-FESQRPEPESGSASNQVLT----------PSIDSRIATIWVVNLIR--
        MTPGVPPFD +P ATSFTNLLSP H    HPT+L S         P PSRV  E+Q+P+          L+          P+I      I   +LI   
Subjt:  MTPGVPPFDGDP-ATSFTNLLSPRH---HHPTVLNSSISHHPTTLPIPSRV-FESQRPEPESGSASNQVLT----------PSIDSRIATIWVVNLIR--

Query:  --SFVGSSKIYTIPSPLQNVVLSLVSFGSSLLPRGV-RGGGR----------------RISFRSFLCLHDEVIIRCCESGEMDL
           +V  S  +    PLQNVVLSLVSFGSSLLPRG   GGGR                RISFRSF+CLHDEVII CCESGEMDL
Subjt:  --SFVGSSKIYTIPSPLQNVVLSLVSFGSSLLPRGV-RGGGR----------------RISFRSFLCLHDEVIIRCCESGEMDL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGTTAAAATTGACGGTCAGATTGGGCAGAAAAGTGGAGAGTACAGAGAACTACAGATTCGAAAGCCCAAACCCAAAAAAAGAAAACCCCGCCCTGCTCAGTCGCT
GATGACACCAGGTGTCCCACCATTCGACGGCGACCCTGCCACGTCATTCACGAATCTCTTATCTCCACGTCACCACCATCCTACGGTCCTTAATTCCAGCATCTCTCATC
ATCCAACGACTCTCCCCATCCCTTCCAGAGTGTTCGAATCGCAAAGGCCAGAGCCAGAGAGTGGGTCGGCATCTAACCAGGTTCTTACGCCGTCGATTGATTCACGGATT
GCGACGATTTGGGTGGTCAATCTGATTCGTTCCTTTGTTGGATCTTCTAAGATCTATACAATTCCGTCGCCACTCCAGAACGTCGTATTGAGCTTGGTCTCTTTTGGATC
TTCTCTCCTGCCCCGAGGGGTGCGGGGAGGGGGGAGGAGGATCTCGTTCCGATCATTTCTTTGCTTACACGATGAAGTGATAATCAGGTGCTGTGAATCTGGCGAAATGG
ATCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGGTTAAAATTGACGGTCAGATTGGGCAGAAAAGTGGAGAGTACAGAGAACTACAGATTCGAAAGCCCAAACCCAAAAAAAGAAAACCCCGCCCTGCTCAGTCGCT
GATGACACCAGGTGTCCCACCATTCGACGGCGACCCTGCCACGTCATTCACGAATCTCTTATCTCCACGTCACCACCATCCTACGGTCCTTAATTCCAGCATCTCTCATC
ATCCAACGACTCTCCCCATCCCTTCCAGAGTGTTCGAATCGCAAAGGCCAGAGCCAGAGAGTGGGTCGGCATCTAACCAGGTTCTTACGCCGTCGATTGATTCACGGATT
GCGACGATTTGGGTGGTCAATCTGATTCGTTCCTTTGTTGGATCTTCTAAGATCTATACAATTCCGTCGCCACTCCAGAACGTCGTATTGAGCTTGGTCTCTTTTGGATC
TTCTCTCCTGCCCCGAGGGGTGCGGGGAGGGGGGAGGAGGATCTCGTTCCGATCATTTCTTTGCTTACACGATGAAGTGATAATCAGGTGCTGTGAATCTGGCGAAATGG
ATCTGTAG
Protein sequenceShow/hide protein sequence
MVVKIDGQIGQKSGEYRELQIRKPKPKKRKPRPAQSLMTPGVPPFDGDPATSFTNLLSPRHHHPTVLNSSISHHPTTLPIPSRVFESQRPEPESGSASNQVLTPSIDSRI
ATIWVVNLIRSFVGSSKIYTIPSPLQNVVLSLVSFGSSLLPRGVRGGGRRISFRSFLCLHDEVIIRCCESGEMDL