| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0025159.1 gag/pol protein [Cucumis melo var. makuwa] | 9.6e-297 | 67.26 | Show/hide |
Query: RLGHINLNKIERLVMSGLLSELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPFELIHSDLCGPMNVKARGGYEYFVSFIDDYLRYGYIYLMYRKSETLE
+LGHINL++I RLV +GLL++L+++SLP CESCLEGKMTKRPF+ KGYRAKEP ELIHSDLCG MNVKARGG+EYF+SFIDDY RYGY+YLM KSE LE
Subjt: RLGHINLNKIERLVMSGLLSELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPFELIHSDLCGPMNVKARGGYEYFVSFIDDYLRYGYIYLMYRKSETLE
Query: KFKEFKTEVENLL------------------------------------VEIAVYILNTVPSKSVCETPFELWHGRKISLRHFRIWGCLTHVLVSNPKKL
KFKE+KTEVENLL VE AV+ILN PSKSV ETPFELW GRK SL HFRIWGC THVLV+NPKKL
Subjt: KFKEFKTEVENLL------------------------------------VEIAVYILNTVPSKSVCETPFELWHGRKISLRHFRIWGCLTHVLVSNPKKL
Query: ESRLKLCLFVGYPKETRGDMFFDPKDNRVLVSTNATFLEENHIRDHLPRSKIVLNEMDSSSARVADGASTSTSVVDPSSSSKVR-SQELRMPRRSERVVR
+SR +LC FVGYPKETRG +FFDP++NRV VSTNATFLEE+H+R+H PRSK+VL+E S RV D S+ V + ++S + SQ LRMPRRS RVV
Subjt: ESRLKLCLFVGYPKETRGDMFFDPKDNRVLVSTNATFLEENHIRDHLPRSKIVLNEMDSSSARVADGASTSTSVVDPSSSSKVR-SQELRMPRRSERVVR
Query: QLERYMGLAKTLVVTPDDDCEDPLTYDQAMAKVDKNEWIKAMDQEMESMYFNSIWELVDQPDGVKPIGCKWIYKRKRDVDEKVQTFKARLVAKSFTQVEE
Q RY+GL +T V PDD EDPL+Y QAM VDK++W+KAMD EMESMYFN +WELVD P+GVKPIGCKWIYKRKRD KVQTFKARLVAK +TQ E
Subjt: QLERYMGLAKTLVVTPDDDCEDPLTYDQAMAKVDKNEWIKAMDQEMESMYFNSIWELVDQPDGVKPIGCKWIYKRKRDVDEKVQTFKARLVAKSFTQVEE
Query: VDYKETFSPVAMVKSIRILLAIAVYYDYEVWKMDVKTAFMNDNLDETIYMDQPKGFIAKGQEQKVCRLQRSIYGLKQASRSWNIRFDEAIKSYGFNQNVD
VDY+ETFSPVAM+KSIRILL+IA +YDYE+W+MDVKTAF+N NL+E+I+M +P+GFI +GQEQKVC+L RSIYGLKQAS+SWNIRFD AIKSYGF+QNVD
Subjt: VDYKETFSPVAMVKSIRILLAIAVYYDYEVWKMDVKTAFMNDNLDETIYMDQPKGFIAKGQEQKVCRLQRSIYGLKQASRSWNIRFDEAIKSYGFNQNVD
Query: EPCVYKKIVNKTIAFLILYVDDILLIGNE-----------------DQCPKTPQKVEDMRRIPYASAVRSLMYAMLCTRPDICYAVGIVSRYQSNQGLDH
EPC+YKKI +AFL+LYVDDIL IGN+ +QCPKTPQ+VEDMRRIPYASAV SLMYAMLCTRPDICYAVGIVSRYQSN GLDH
Subjt: EPCVYKKIVNKTIAFLILYVDDILLIGNE-----------------DQCPKTPQKVEDMRRIPYASAVRSLMYAMLCTRPDICYAVGIVSRYQSNQGLDH
Query: WTIVKAILKYLRRMRNYNLVYDRGDLILT------------------------------------GCIANSTMEAEYVVACEAEKEAVWLRKFMMDLEVV
WT VK ILKYLRR R+Y LVY DLILT GCIA+STMEAEYV ACEA KEAVWLRKF+ DLEVV
Subjt: WTIVKAILKYLRRMRNYNLVYDRGDLILT------------------------------------GCIANSTMEAEYVVACEAEKEAVWLRKFMMDLEVV
Query: PNMNLSITLFCDNSGAVANSREPRSHKRGKHIERKYHLIREIMHRGDVTVTQIASEHNVADPFIKALTAKVFKGHLESLGLQ
PNMNL ITL+ DNS AVANS+EPRSHKRGKHIERKYHLIREI+ RGD VT+IASEHN+ADPF K LTAKVF+GHL+SLGL+
Subjt: PNMNLSITLFCDNSGAVANSREPRSHKRGKHIERKYHLIREIMHRGDVTVTQIASEHNVADPFIKALTAKVFKGHLESLGLQ
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| KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa] | 1.9e-297 | 60.78 | Show/hide |
Query: RTKRIKVSLKESAHLWHLRLGHINLNKIERLVMSGLLSELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPFELIHSDLCGPMNVKARGGYEYFVSFIDD
+ KR ++S + +LWHLRLGHINL++I RLV +GLL++L++ SLP CESCLEGKMTKRPF+GKGYRAKEP ELIHSDLCGPMNVKARGG+EYF+SFIDD
Subjt: RTKRIKVSLKESAHLWHLRLGHINLNKIERLVMSGLLSELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPFELIHSDLCGPMNVKARGGYEYFVSFIDD
Query: YLRYGYIYLMYRKSETLEKFKEFKTEVENLL---------------------------------------------------------------------
Y RYGY+YLM KSE LEKFKE+KTEVENLL
Subjt: YLRYGYIYLMYRKSETLEKFKEFKTEVENLL---------------------------------------------------------------------
Query: ----VEIAVYILNTVPSKSVCETPFELWHGRKISLRHFRIWGCLTHVLVSNPKKLESRLKLCLFVGYPKETRGDMFFDPKDNRVLVSTNATFLEENHIRD
VE AV+ILN VPSKSV ETPFELW GRK SL HFRIWGC HVLV+NPKKLE R +LC FVGYPKETRG +FFDP++NRV VSTNATFLEE+H+R+
Subjt: ----VEIAVYILNTVPSKSVCETPFELWHGRKISLRHFRIWGCLTHVLVSNPKKLESRLKLCLFVGYPKETRGDMFFDPKDNRVLVSTNATFLEENHIRD
Query: HLPRSKIVLNEMDSSSARVADGASTSTSVVDPSSSSKVR-SQELRMPRRSERVVRQLERYMGLAKTLVVTPDDDCEDPLTYDQAMAKVDKNEWIKAMDQE
H PRSK+VL+E S RV D S+ V + ++S + SQ LRMPRRS RVV Q RY+GL +T VV PDD EDPL+Y QAM VDK++W+KAMD E
Subjt: HLPRSKIVLNEMDSSSARVADGASTSTSVVDPSSSSKVR-SQELRMPRRSERVVRQLERYMGLAKTLVVTPDDDCEDPLTYDQAMAKVDKNEWIKAMDQE
Query: MESMYFNSIWELVDQPDGVKPIGCKWIYKRKRDVDEKVQTFKARLVAKSFTQVEEVDYKETFSPVAMVKSIRILLAIAVYYDYEVWKMDVKTAFMNDNLD
MESMYFNS+WELVD P+GVKPIGCKWIYKRKRD KVQTFKARLVAK +TQ E VDY+ETFSPVAM+KSIRILL+IA +YDYE+W+MDVKTAF+N NL+
Subjt: MESMYFNSIWELVDQPDGVKPIGCKWIYKRKRDVDEKVQTFKARLVAKSFTQVEEVDYKETFSPVAMVKSIRILLAIAVYYDYEVWKMDVKTAFMNDNLD
Query: ETIYMDQPKGFIAKGQEQKVCRLQRSIYGLKQASRSWNIRFDEAIKSYGFNQNVDEPCVYKKIVNKTIAFLILYVDDILLIGNE----------------
E+I+M QP+GFI +GQEQKVC+L RSIYGLKQASRSWNIRFD AIKSYGF+QNVDEPCVYKKI +AFL+LYVDDILLIGN+
Subjt: ETIYMDQPKGFIAKGQEQKVCRLQRSIYGLKQASRSWNIRFDEAIKSYGFNQNVDEPCVYKKIVNKTIAFLILYVDDILLIGNE----------------
Query: -----------------------------------------------------------DQCPKTPQKVEDMRRIPYASAVRSLMYAMLCTRPDICYAVG
+Q PKTPQ+VEDMRRIPYASAV SLMYAMLCTRPDICYAVG
Subjt: -----------------------------------------------------------DQCPKTPQKVEDMRRIPYASAVRSLMYAMLCTRPDICYAVG
Query: IVSRYQSNQGLDHWTIVKAILKYLRRMRNYNLVYDRGDLILT------------------------------------GCIANSTMEAEYVVACEAEKEA
IVSRYQSN GLDHWT VK +LKYLRR R+Y LVY DLILT GCIA+STMEAEYV ACEA KEA
Subjt: IVSRYQSNQGLDHWTIVKAILKYLRRMRNYNLVYDRGDLILT------------------------------------GCIANSTMEAEYVVACEAEKEA
Query: VWLRKFMMDLEVVPNMNLSITLFCDNSGAVANSREPRSHKRGKHIERKYHLIREIMHRGDVTVTQIASEHNVADPFIKALTAKVFKGHLESLGLQ
VWLRKF+ DLEVVPNMNL ITL+CDNSGAVANS+EPRSHKRGKHIERKYHLIREI+ RGDV VT+IASEHN+ADPF K LTAKVF+GHLESLGL+
Subjt: VWLRKFMMDLEVVPNMNLSITLFCDNSGAVANSREPRSHKRGKHIERKYHLIREIMHRGDVTVTQIASEHNVADPFIKALTAKVFKGHLESLGLQ
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| KAA0031826.1 gag/pol protein [Cucumis melo var. makuwa] | 2.2e-301 | 61.2 | Show/hide |
Query: RTKRIKVSLKESAHLWHLRLGHINLNKIERLVMSGLLSELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPFELIHSDLCGPMNVKARGGYEYFVSFIDD
+ KR+K+S KE+AHLWHLRLGHINLN+IERLV +GLLSELEENSLPVCESCLEGKMTKRPF+GKG+RAKEP EL+HSDLCGPMNVKARGG+EYF++F DD
Subjt: RTKRIKVSLKESAHLWHLRLGHINLNKIERLVMSGLLSELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPFELIHSDLCGPMNVKARGGYEYFVSFIDD
Query: YLRYGYIYLMYRKSETLEKFKEFKTEVENLL---------------------------------------------------------------------
Y RYGY+YLM KSE LEKFKE+K EVEN L
Subjt: YLRYGYIYLMYRKSETLEKFKEFKTEVENLL---------------------------------------------------------------------
Query: ----VEIAVYILNTVPSKSVCETPFELWHGRKISLRHFRIWGCLTHVLVSNPKKLESRLKLCLFVGYPKETRGDMFFDPKDNRVLVSTNATFLEENHIRD
V+ AVYILN VPSKSV ETP +LW+GRK SLRHFRIWGC HVL +NPKKLE R KLCLFVGYPK TRG F+DPKDN+V VSTNATFLEE+HIR+
Subjt: ----VEIAVYILNTVPSKSVCETPFELWHGRKISLRHFRIWGCLTHVLVSNPKKLESRLKLCLFVGYPKETRGDMFFDPKDNRVLVSTNATFLEENHIRD
Query: HLPRSKIVLNEMDSS----SARVADGASTSTSVVDPSSSSKV-RSQELRMPRRSERVVRQLERYMGLAKTLVVTPDDDCEDPLTYDQAMAKVDKNEWIKA
H PRSKIVLNE+ S RV + S T VV SS++ + Q LR PRRS RV RYM L +TL V D D EDPLT+ +AM VDK+EWIKA
Subjt: HLPRSKIVLNEMDSS----SARVADGASTSTSVVDPSSSSKV-RSQELRMPRRSERVVRQLERYMGLAKTLVVTPDDDCEDPLTYDQAMAKVDKNEWIKA
Query: MDQEMESMYFNSIWELVDQPDGVKPIGCKWIYKRKRDVDEKVQTFKARLVAKSFTQVEEVDYKETFSPVAMVKSIRILLAIAVYYDYEVWKMDVKTAFMN
M+ E+ESMYFNS+W+LVDQPDGVKPIGCKWIYKRKR D KVQTFKARLVAK +TQVE VDY+ETFSPVAM+KSIRILL+IA Y+DYE+W+MDVKTAF+N
Subjt: MDQEMESMYFNSIWELVDQPDGVKPIGCKWIYKRKRDVDEKVQTFKARLVAKSFTQVEEVDYKETFSPVAMVKSIRILLAIAVYYDYEVWKMDVKTAFMN
Query: DNLDETIYMDQPKGFIAKGQEQKVCRLQRSIYGLKQASRSWNIRFDEAIKSYGFNQNVDEPCVYKKIVNKTIAFLILYVDDILLIGNE------------
NL+ETIYM QP+GFI GQEQK+C+L RSIYGLKQASRSWNIRFD AIKSYGF+Q VDEPCVYK+I+NK++AFL+LYVDDILLIGN+
Subjt: DNLDETIYMDQPKGFIAKGQEQKVCRLQRSIYGLKQASRSWNIRFDEAIKSYGFNQNVDEPCVYKKIVNKTIAFLILYVDDILLIGNE------------
Query: ---------------------------------------------------------------DQCPKTPQKVEDMRRIPYASAVRSLMYAMLCTRPDIC
+QCPKTPQ VE+MR IPYASAV SLMYAMLCTRPDIC
Subjt: ---------------------------------------------------------------DQCPKTPQKVEDMRRIPYASAVRSLMYAMLCTRPDIC
Query: YAVGIVSRYQSNQGLDHWTIVKAILKYLRRMRNYNLVYDRGDLILT------------------------------------GCIANSTMEAEYVVACEA
YAVGIVSRYQSN GL HWT VK ILKYLRR R+Y LVY DLILT GCIA+STMEAEYV ACEA
Subjt: YAVGIVSRYQSNQGLDHWTIVKAILKYLRRMRNYNLVYDRGDLILT------------------------------------GCIANSTMEAEYVVACEA
Query: EKEAVWLRKFMMDLEVVPNMNLSITLFCDNSGAVANSREPRSHKRGKHIERKYHLIREIMHRGDVTVTQIASEHNVADPFIKALTAKVFKGHLESLGLQV
KEAVWLR F++DLEVVPNM+ ITL+CDNSGAVANSREPRSHKRGKHIERKYHLIREI+HRGDV VTQIAS HNVADPF K LTAKVF+GHLESLGL+
Subjt: EKEAVWLRKFMMDLEVVPNMNLSITLFCDNSGAVANSREPRSHKRGKHIERKYHLIREIMHRGDVTVTQIASEHNVADPFIKALTAKVFKGHLESLGLQV
Query: LP
+P
Subjt: LP
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| KAA0035879.1 gag/pol protein [Cucumis melo var. makuwa] | 2.2e-301 | 61.2 | Show/hide |
Query: RTKRIKVSLKESAHLWHLRLGHINLNKIERLVMSGLLSELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPFELIHSDLCGPMNVKARGGYEYFVSFIDD
+ KR+K+S KE+AHLWHLRLGHINLN+IERLV +GLLSELEENSLPVCESCLEGKMTKRPF+GKG+RAKEP EL+HSDLCGPMNVKARGG+EYF++F DD
Subjt: RTKRIKVSLKESAHLWHLRLGHINLNKIERLVMSGLLSELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPFELIHSDLCGPMNVKARGGYEYFVSFIDD
Query: YLRYGYIYLMYRKSETLEKFKEFKTEVENLL---------------------------------------------------------------------
Y RYGY+YLM KSE LEKFKE+K EVEN L
Subjt: YLRYGYIYLMYRKSETLEKFKEFKTEVENLL---------------------------------------------------------------------
Query: ----VEIAVYILNTVPSKSVCETPFELWHGRKISLRHFRIWGCLTHVLVSNPKKLESRLKLCLFVGYPKETRGDMFFDPKDNRVLVSTNATFLEENHIRD
V+ AVYILN VPSKSV ETP +LW+GRK SLRHFRIWGC HVL +NPKKLE R KLCLFVGYPK TRG F+DPKDN+V VSTNATFLEE+HIR+
Subjt: ----VEIAVYILNTVPSKSVCETPFELWHGRKISLRHFRIWGCLTHVLVSNPKKLESRLKLCLFVGYPKETRGDMFFDPKDNRVLVSTNATFLEENHIRD
Query: HLPRSKIVLNEMDSS----SARVADGASTSTSVVDPSSSSKV-RSQELRMPRRSERVVRQLERYMGLAKTLVVTPDDDCEDPLTYDQAMAKVDKNEWIKA
H PRSKIVLNE+ S RV + S T VV SS++ + Q LR PRRS RV RYM L +TL V D D EDPLT+ +AM VDK+EWIKA
Subjt: HLPRSKIVLNEMDSS----SARVADGASTSTSVVDPSSSSKV-RSQELRMPRRSERVVRQLERYMGLAKTLVVTPDDDCEDPLTYDQAMAKVDKNEWIKA
Query: MDQEMESMYFNSIWELVDQPDGVKPIGCKWIYKRKRDVDEKVQTFKARLVAKSFTQVEEVDYKETFSPVAMVKSIRILLAIAVYYDYEVWKMDVKTAFMN
M+ E+ESMYFNS+W+LVDQPDGVKPIGCKWIYKRKR D KVQTFKARLVAK +TQVE VDY+ETFSPVAM+KSIRILL+IA Y+DYE+W+MDVKTAF+N
Subjt: MDQEMESMYFNSIWELVDQPDGVKPIGCKWIYKRKRDVDEKVQTFKARLVAKSFTQVEEVDYKETFSPVAMVKSIRILLAIAVYYDYEVWKMDVKTAFMN
Query: DNLDETIYMDQPKGFIAKGQEQKVCRLQRSIYGLKQASRSWNIRFDEAIKSYGFNQNVDEPCVYKKIVNKTIAFLILYVDDILLIGNE------------
NL+ETIYM QP+GFI GQEQK+C+L RSIYGLKQASRSWNIRFD AIKSYGF+Q VDEPCVYK+I+NK++AFL+LYVDDILLIGN+
Subjt: DNLDETIYMDQPKGFIAKGQEQKVCRLQRSIYGLKQASRSWNIRFDEAIKSYGFNQNVDEPCVYKKIVNKTIAFLILYVDDILLIGNE------------
Query: ---------------------------------------------------------------DQCPKTPQKVEDMRRIPYASAVRSLMYAMLCTRPDIC
+QCPKTPQ VE+MR IPYASAV SLMYAMLCTRPDIC
Subjt: ---------------------------------------------------------------DQCPKTPQKVEDMRRIPYASAVRSLMYAMLCTRPDIC
Query: YAVGIVSRYQSNQGLDHWTIVKAILKYLRRMRNYNLVYDRGDLILT------------------------------------GCIANSTMEAEYVVACEA
YAVGIVSRYQSN GL HWT VK ILKYLRR R+Y LVY DLILT GCIA+STMEAEYV ACEA
Subjt: YAVGIVSRYQSNQGLDHWTIVKAILKYLRRMRNYNLVYDRGDLILT------------------------------------GCIANSTMEAEYVVACEA
Query: EKEAVWLRKFMMDLEVVPNMNLSITLFCDNSGAVANSREPRSHKRGKHIERKYHLIREIMHRGDVTVTQIASEHNVADPFIKALTAKVFKGHLESLGLQV
KEAVWLR F++DLEVVPNM+ ITL+CDNSGAVANSREPRSHKRGKHIERKYHLIREI+HRGDV VTQIAS HNVADPF K LTAKVF+GHLESLGL+
Subjt: EKEAVWLRKFMMDLEVVPNMNLSITLFCDNSGAVANSREPRSHKRGKHIERKYHLIREIMHRGDVTVTQIASEHNVADPFIKALTAKVFKGHLESLGLQV
Query: LP
+P
Subjt: LP
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| KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa] | 2.2e-301 | 61.2 | Show/hide |
Query: RTKRIKVSLKESAHLWHLRLGHINLNKIERLVMSGLLSELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPFELIHSDLCGPMNVKARGGYEYFVSFIDD
+ KR+K+S KE+AHLWHLRLGHINLN+IERLV +GLLSELEENSLPVCESCLEGKMTKRPF+GKG+RAKEP EL+HSDLCGPMNVKARGG+EYF++F DD
Subjt: RTKRIKVSLKESAHLWHLRLGHINLNKIERLVMSGLLSELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPFELIHSDLCGPMNVKARGGYEYFVSFIDD
Query: YLRYGYIYLMYRKSETLEKFKEFKTEVENLL---------------------------------------------------------------------
Y RYGY+YLM KSE LEKFKE+K EVEN L
Subjt: YLRYGYIYLMYRKSETLEKFKEFKTEVENLL---------------------------------------------------------------------
Query: ----VEIAVYILNTVPSKSVCETPFELWHGRKISLRHFRIWGCLTHVLVSNPKKLESRLKLCLFVGYPKETRGDMFFDPKDNRVLVSTNATFLEENHIRD
V+ AVYILN VPSKSV ETP +LW+GRK SLRHFRIWGC HVL +NPKKLE R KLCLFVGYPK TRG F+DPKDN+V VSTNATFLEE+HIR+
Subjt: ----VEIAVYILNTVPSKSVCETPFELWHGRKISLRHFRIWGCLTHVLVSNPKKLESRLKLCLFVGYPKETRGDMFFDPKDNRVLVSTNATFLEENHIRD
Query: HLPRSKIVLNEMDSS----SARVADGASTSTSVVDPSSSSKV-RSQELRMPRRSERVVRQLERYMGLAKTLVVTPDDDCEDPLTYDQAMAKVDKNEWIKA
H PRSKIVLNE+ S RV + S T VV SS++ + Q LR PRRS RV RYM L +TL V D D EDPLT+ +AM VDK+EWIKA
Subjt: HLPRSKIVLNEMDSS----SARVADGASTSTSVVDPSSSSKV-RSQELRMPRRSERVVRQLERYMGLAKTLVVTPDDDCEDPLTYDQAMAKVDKNEWIKA
Query: MDQEMESMYFNSIWELVDQPDGVKPIGCKWIYKRKRDVDEKVQTFKARLVAKSFTQVEEVDYKETFSPVAMVKSIRILLAIAVYYDYEVWKMDVKTAFMN
M+ E+ESMYFNS+W+LVDQPDGVKPIGCKWIYKRKR D KVQTFKARLVAK +TQVE VDY+ETFSPVAM+KSIRILL+IA Y+DYE+W+MDVKTAF+N
Subjt: MDQEMESMYFNSIWELVDQPDGVKPIGCKWIYKRKRDVDEKVQTFKARLVAKSFTQVEEVDYKETFSPVAMVKSIRILLAIAVYYDYEVWKMDVKTAFMN
Query: DNLDETIYMDQPKGFIAKGQEQKVCRLQRSIYGLKQASRSWNIRFDEAIKSYGFNQNVDEPCVYKKIVNKTIAFLILYVDDILLIGNE------------
NL+ETIYM QP+GFI GQEQK+C+L RSIYGLKQASRSWNIRFD AIKSYGF+Q VDEPCVYK+I+NK++AFL+LYVDDILLIGN+
Subjt: DNLDETIYMDQPKGFIAKGQEQKVCRLQRSIYGLKQASRSWNIRFDEAIKSYGFNQNVDEPCVYKKIVNKTIAFLILYVDDILLIGNE------------
Query: ---------------------------------------------------------------DQCPKTPQKVEDMRRIPYASAVRSLMYAMLCTRPDIC
+QCPKTPQ VE+MR IPYASAV SLMYAMLCTRPDIC
Subjt: ---------------------------------------------------------------DQCPKTPQKVEDMRRIPYASAVRSLMYAMLCTRPDIC
Query: YAVGIVSRYQSNQGLDHWTIVKAILKYLRRMRNYNLVYDRGDLILT------------------------------------GCIANSTMEAEYVVACEA
YAVGIVSRYQSN GL HWT VK ILKYLRR R+Y LVY DLILT GCIA+STMEAEYV ACEA
Subjt: YAVGIVSRYQSNQGLDHWTIVKAILKYLRRMRNYNLVYDRGDLILT------------------------------------GCIANSTMEAEYVVACEA
Query: EKEAVWLRKFMMDLEVVPNMNLSITLFCDNSGAVANSREPRSHKRGKHIERKYHLIREIMHRGDVTVTQIASEHNVADPFIKALTAKVFKGHLESLGLQV
KEAVWLR F++DLEVVPNM+ ITL+CDNSGAVANSREPRSHKRGKHIERKYHLIREI+HRGDV VTQIAS HNVADPF K LTAKVF+GHLESLGL+
Subjt: EKEAVWLRKFMMDLEVVPNMNLSITLFCDNSGAVANSREPRSHKRGKHIERKYHLIREIMHRGDVTVTQIASEHNVADPFIKALTAKVFKGHLESLGLQV
Query: LP
+P
Subjt: LP
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SIN2 Gag/pol protein | 4.6e-297 | 67.26 | Show/hide |
Query: RLGHINLNKIERLVMSGLLSELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPFELIHSDLCGPMNVKARGGYEYFVSFIDDYLRYGYIYLMYRKSETLE
+LGHINL++I RLV +GLL++L+++SLP CESCLEGKMTKRPF+ KGYRAKEP ELIHSDLCG MNVKARGG+EYF+SFIDDY RYGY+YLM KSE LE
Subjt: RLGHINLNKIERLVMSGLLSELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPFELIHSDLCGPMNVKARGGYEYFVSFIDDYLRYGYIYLMYRKSETLE
Query: KFKEFKTEVENLL------------------------------------VEIAVYILNTVPSKSVCETPFELWHGRKISLRHFRIWGCLTHVLVSNPKKL
KFKE+KTEVENLL VE AV+ILN PSKSV ETPFELW GRK SL HFRIWGC THVLV+NPKKL
Subjt: KFKEFKTEVENLL------------------------------------VEIAVYILNTVPSKSVCETPFELWHGRKISLRHFRIWGCLTHVLVSNPKKL
Query: ESRLKLCLFVGYPKETRGDMFFDPKDNRVLVSTNATFLEENHIRDHLPRSKIVLNEMDSSSARVADGASTSTSVVDPSSSSKVR-SQELRMPRRSERVVR
+SR +LC FVGYPKETRG +FFDP++NRV VSTNATFLEE+H+R+H PRSK+VL+E S RV D S+ V + ++S + SQ LRMPRRS RVV
Subjt: ESRLKLCLFVGYPKETRGDMFFDPKDNRVLVSTNATFLEENHIRDHLPRSKIVLNEMDSSSARVADGASTSTSVVDPSSSSKVR-SQELRMPRRSERVVR
Query: QLERYMGLAKTLVVTPDDDCEDPLTYDQAMAKVDKNEWIKAMDQEMESMYFNSIWELVDQPDGVKPIGCKWIYKRKRDVDEKVQTFKARLVAKSFTQVEE
Q RY+GL +T V PDD EDPL+Y QAM VDK++W+KAMD EMESMYFN +WELVD P+GVKPIGCKWIYKRKRD KVQTFKARLVAK +TQ E
Subjt: QLERYMGLAKTLVVTPDDDCEDPLTYDQAMAKVDKNEWIKAMDQEMESMYFNSIWELVDQPDGVKPIGCKWIYKRKRDVDEKVQTFKARLVAKSFTQVEE
Query: VDYKETFSPVAMVKSIRILLAIAVYYDYEVWKMDVKTAFMNDNLDETIYMDQPKGFIAKGQEQKVCRLQRSIYGLKQASRSWNIRFDEAIKSYGFNQNVD
VDY+ETFSPVAM+KSIRILL+IA +YDYE+W+MDVKTAF+N NL+E+I+M +P+GFI +GQEQKVC+L RSIYGLKQAS+SWNIRFD AIKSYGF+QNVD
Subjt: VDYKETFSPVAMVKSIRILLAIAVYYDYEVWKMDVKTAFMNDNLDETIYMDQPKGFIAKGQEQKVCRLQRSIYGLKQASRSWNIRFDEAIKSYGFNQNVD
Query: EPCVYKKIVNKTIAFLILYVDDILLIGNE-----------------DQCPKTPQKVEDMRRIPYASAVRSLMYAMLCTRPDICYAVGIVSRYQSNQGLDH
EPC+YKKI +AFL+LYVDDIL IGN+ +QCPKTPQ+VEDMRRIPYASAV SLMYAMLCTRPDICYAVGIVSRYQSN GLDH
Subjt: EPCVYKKIVNKTIAFLILYVDDILLIGNE-----------------DQCPKTPQKVEDMRRIPYASAVRSLMYAMLCTRPDICYAVGIVSRYQSNQGLDH
Query: WTIVKAILKYLRRMRNYNLVYDRGDLILT------------------------------------GCIANSTMEAEYVVACEAEKEAVWLRKFMMDLEVV
WT VK ILKYLRR R+Y LVY DLILT GCIA+STMEAEYV ACEA KEAVWLRKF+ DLEVV
Subjt: WTIVKAILKYLRRMRNYNLVYDRGDLILT------------------------------------GCIANSTMEAEYVVACEAEKEAVWLRKFMMDLEVV
Query: PNMNLSITLFCDNSGAVANSREPRSHKRGKHIERKYHLIREIMHRGDVTVTQIASEHNVADPFIKALTAKVFKGHLESLGLQ
PNMNL ITL+ DNS AVANS+EPRSHKRGKHIERKYHLIREI+ RGD VT+IASEHN+ADPF K LTAKVF+GHL+SLGL+
Subjt: PNMNLSITLFCDNSGAVANSREPRSHKRGKHIERKYHLIREIMHRGDVTVTQIASEHNVADPFIKALTAKVFKGHLESLGLQ
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| A0A5A7SMH8 Gag/pol protein | 1.1e-301 | 61.2 | Show/hide |
Query: RTKRIKVSLKESAHLWHLRLGHINLNKIERLVMSGLLSELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPFELIHSDLCGPMNVKARGGYEYFVSFIDD
+ KR+K+S KE+AHLWHLRLGHINLN+IERLV +GLLSELEENSLPVCESCLEGKMTKRPF+GKG+RAKEP EL+HSDLCGPMNVKARGG+EYF++F DD
Subjt: RTKRIKVSLKESAHLWHLRLGHINLNKIERLVMSGLLSELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPFELIHSDLCGPMNVKARGGYEYFVSFIDD
Query: YLRYGYIYLMYRKSETLEKFKEFKTEVENLL---------------------------------------------------------------------
Y RYGY+YLM KSE LEKFKE+K EVEN L
Subjt: YLRYGYIYLMYRKSETLEKFKEFKTEVENLL---------------------------------------------------------------------
Query: ----VEIAVYILNTVPSKSVCETPFELWHGRKISLRHFRIWGCLTHVLVSNPKKLESRLKLCLFVGYPKETRGDMFFDPKDNRVLVSTNATFLEENHIRD
V+ AVYILN VPSKSV ETP +LW+GRK SLRHFRIWGC HVL +NPKKLE R KLCLFVGYPK TRG F+DPKDN+V VSTNATFLEE+HIR+
Subjt: ----VEIAVYILNTVPSKSVCETPFELWHGRKISLRHFRIWGCLTHVLVSNPKKLESRLKLCLFVGYPKETRGDMFFDPKDNRVLVSTNATFLEENHIRD
Query: HLPRSKIVLNEMDSS----SARVADGASTSTSVVDPSSSSKV-RSQELRMPRRSERVVRQLERYMGLAKTLVVTPDDDCEDPLTYDQAMAKVDKNEWIKA
H PRSKIVLNE+ S RV + S T VV SS++ + Q LR PRRS RV RYM L +TL V D D EDPLT+ +AM VDK+EWIKA
Subjt: HLPRSKIVLNEMDSS----SARVADGASTSTSVVDPSSSSKV-RSQELRMPRRSERVVRQLERYMGLAKTLVVTPDDDCEDPLTYDQAMAKVDKNEWIKA
Query: MDQEMESMYFNSIWELVDQPDGVKPIGCKWIYKRKRDVDEKVQTFKARLVAKSFTQVEEVDYKETFSPVAMVKSIRILLAIAVYYDYEVWKMDVKTAFMN
M+ E+ESMYFNS+W+LVDQPDGVKPIGCKWIYKRKR D KVQTFKARLVAK +TQVE VDY+ETFSPVAM+KSIRILL+IA Y+DYE+W+MDVKTAF+N
Subjt: MDQEMESMYFNSIWELVDQPDGVKPIGCKWIYKRKRDVDEKVQTFKARLVAKSFTQVEEVDYKETFSPVAMVKSIRILLAIAVYYDYEVWKMDVKTAFMN
Query: DNLDETIYMDQPKGFIAKGQEQKVCRLQRSIYGLKQASRSWNIRFDEAIKSYGFNQNVDEPCVYKKIVNKTIAFLILYVDDILLIGNE------------
NL+ETIYM QP+GFI GQEQK+C+L RSIYGLKQASRSWNIRFD AIKSYGF+Q VDEPCVYK+I+NK++AFL+LYVDDILLIGN+
Subjt: DNLDETIYMDQPKGFIAKGQEQKVCRLQRSIYGLKQASRSWNIRFDEAIKSYGFNQNVDEPCVYKKIVNKTIAFLILYVDDILLIGNE------------
Query: ---------------------------------------------------------------DQCPKTPQKVEDMRRIPYASAVRSLMYAMLCTRPDIC
+QCPKTPQ VE+MR IPYASAV SLMYAMLCTRPDIC
Subjt: ---------------------------------------------------------------DQCPKTPQKVEDMRRIPYASAVRSLMYAMLCTRPDIC
Query: YAVGIVSRYQSNQGLDHWTIVKAILKYLRRMRNYNLVYDRGDLILT------------------------------------GCIANSTMEAEYVVACEA
YAVGIVSRYQSN GL HWT VK ILKYLRR R+Y LVY DLILT GCIA+STMEAEYV ACEA
Subjt: YAVGIVSRYQSNQGLDHWTIVKAILKYLRRMRNYNLVYDRGDLILT------------------------------------GCIANSTMEAEYVVACEA
Query: EKEAVWLRKFMMDLEVVPNMNLSITLFCDNSGAVANSREPRSHKRGKHIERKYHLIREIMHRGDVTVTQIASEHNVADPFIKALTAKVFKGHLESLGLQV
KEAVWLR F++DLEVVPNM+ ITL+CDNSGAVANSREPRSHKRGKHIERKYHLIREI+HRGDV VTQIAS HNVADPF K LTAKVF+GHLESLGL+
Subjt: EKEAVWLRKFMMDLEVVPNMNLSITLFCDNSGAVANSREPRSHKRGKHIERKYHLIREIMHRGDVTVTQIASEHNVADPFIKALTAKVFKGHLESLGLQV
Query: LP
+P
Subjt: LP
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| A0A5A7TZD0 Gag/pol protein | 9.4e-298 | 60.78 | Show/hide |
Query: RTKRIKVSLKESAHLWHLRLGHINLNKIERLVMSGLLSELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPFELIHSDLCGPMNVKARGGYEYFVSFIDD
+ KR ++S + +LWHLRLGHINL++I RLV +GLL++L++ SLP CESCLEGKMTKRPF+GKGYRAKEP ELIHSDLCGPMNVKARGG+EYF+SFIDD
Subjt: RTKRIKVSLKESAHLWHLRLGHINLNKIERLVMSGLLSELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPFELIHSDLCGPMNVKARGGYEYFVSFIDD
Query: YLRYGYIYLMYRKSETLEKFKEFKTEVENLL---------------------------------------------------------------------
Y RYGY+YLM KSE LEKFKE+KTEVENLL
Subjt: YLRYGYIYLMYRKSETLEKFKEFKTEVENLL---------------------------------------------------------------------
Query: ----VEIAVYILNTVPSKSVCETPFELWHGRKISLRHFRIWGCLTHVLVSNPKKLESRLKLCLFVGYPKETRGDMFFDPKDNRVLVSTNATFLEENHIRD
VE AV+ILN VPSKSV ETPFELW GRK SL HFRIWGC HVLV+NPKKLE R +LC FVGYPKETRG +FFDP++NRV VSTNATFLEE+H+R+
Subjt: ----VEIAVYILNTVPSKSVCETPFELWHGRKISLRHFRIWGCLTHVLVSNPKKLESRLKLCLFVGYPKETRGDMFFDPKDNRVLVSTNATFLEENHIRD
Query: HLPRSKIVLNEMDSSSARVADGASTSTSVVDPSSSSKVR-SQELRMPRRSERVVRQLERYMGLAKTLVVTPDDDCEDPLTYDQAMAKVDKNEWIKAMDQE
H PRSK+VL+E S RV D S+ V + ++S + SQ LRMPRRS RVV Q RY+GL +T VV PDD EDPL+Y QAM VDK++W+KAMD E
Subjt: HLPRSKIVLNEMDSSSARVADGASTSTSVVDPSSSSKVR-SQELRMPRRSERVVRQLERYMGLAKTLVVTPDDDCEDPLTYDQAMAKVDKNEWIKAMDQE
Query: MESMYFNSIWELVDQPDGVKPIGCKWIYKRKRDVDEKVQTFKARLVAKSFTQVEEVDYKETFSPVAMVKSIRILLAIAVYYDYEVWKMDVKTAFMNDNLD
MESMYFNS+WELVD P+GVKPIGCKWIYKRKRD KVQTFKARLVAK +TQ E VDY+ETFSPVAM+KSIRILL+IA +YDYE+W+MDVKTAF+N NL+
Subjt: MESMYFNSIWELVDQPDGVKPIGCKWIYKRKRDVDEKVQTFKARLVAKSFTQVEEVDYKETFSPVAMVKSIRILLAIAVYYDYEVWKMDVKTAFMNDNLD
Query: ETIYMDQPKGFIAKGQEQKVCRLQRSIYGLKQASRSWNIRFDEAIKSYGFNQNVDEPCVYKKIVNKTIAFLILYVDDILLIGNE----------------
E+I+M QP+GFI +GQEQKVC+L RSIYGLKQASRSWNIRFD AIKSYGF+QNVDEPCVYKKI +AFL+LYVDDILLIGN+
Subjt: ETIYMDQPKGFIAKGQEQKVCRLQRSIYGLKQASRSWNIRFDEAIKSYGFNQNVDEPCVYKKIVNKTIAFLILYVDDILLIGNE----------------
Query: -----------------------------------------------------------DQCPKTPQKVEDMRRIPYASAVRSLMYAMLCTRPDICYAVG
+Q PKTPQ+VEDMRRIPYASAV SLMYAMLCTRPDICYAVG
Subjt: -----------------------------------------------------------DQCPKTPQKVEDMRRIPYASAVRSLMYAMLCTRPDICYAVG
Query: IVSRYQSNQGLDHWTIVKAILKYLRRMRNYNLVYDRGDLILT------------------------------------GCIANSTMEAEYVVACEAEKEA
IVSRYQSN GLDHWT VK +LKYLRR R+Y LVY DLILT GCIA+STMEAEYV ACEA KEA
Subjt: IVSRYQSNQGLDHWTIVKAILKYLRRMRNYNLVYDRGDLILT------------------------------------GCIANSTMEAEYVVACEAEKEA
Query: VWLRKFMMDLEVVPNMNLSITLFCDNSGAVANSREPRSHKRGKHIERKYHLIREIMHRGDVTVTQIASEHNVADPFIKALTAKVFKGHLESLGLQ
VWLRKF+ DLEVVPNMNL ITL+CDNSGAVANS+EPRSHKRGKHIERKYHLIREI+ RGDV VT+IASEHN+ADPF K LTAKVF+GHLESLGL+
Subjt: VWLRKFMMDLEVVPNMNLSITLFCDNSGAVANSREPRSHKRGKHIERKYHLIREIMHRGDVTVTQIASEHNVADPFIKALTAKVFKGHLESLGLQ
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| A0A5A7TZD7 Gag/pol protein | 1.1e-301 | 61.2 | Show/hide |
Query: RTKRIKVSLKESAHLWHLRLGHINLNKIERLVMSGLLSELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPFELIHSDLCGPMNVKARGGYEYFVSFIDD
+ KR+K+S KE+AHLWHLRLGHINLN+IERLV +GLLSELEENSLPVCESCLEGKMTKRPF+GKG+RAKEP EL+HSDLCGPMNVKARGG+EYF++F DD
Subjt: RTKRIKVSLKESAHLWHLRLGHINLNKIERLVMSGLLSELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPFELIHSDLCGPMNVKARGGYEYFVSFIDD
Query: YLRYGYIYLMYRKSETLEKFKEFKTEVENLL---------------------------------------------------------------------
Y RYGY+YLM KSE LEKFKE+K EVEN L
Subjt: YLRYGYIYLMYRKSETLEKFKEFKTEVENLL---------------------------------------------------------------------
Query: ----VEIAVYILNTVPSKSVCETPFELWHGRKISLRHFRIWGCLTHVLVSNPKKLESRLKLCLFVGYPKETRGDMFFDPKDNRVLVSTNATFLEENHIRD
V+ AVYILN VPSKSV ETP +LW+GRK SLRHFRIWGC HVL +NPKKLE R KLCLFVGYPK TRG F+DPKDN+V VSTNATFLEE+HIR+
Subjt: ----VEIAVYILNTVPSKSVCETPFELWHGRKISLRHFRIWGCLTHVLVSNPKKLESRLKLCLFVGYPKETRGDMFFDPKDNRVLVSTNATFLEENHIRD
Query: HLPRSKIVLNEMDSS----SARVADGASTSTSVVDPSSSSKV-RSQELRMPRRSERVVRQLERYMGLAKTLVVTPDDDCEDPLTYDQAMAKVDKNEWIKA
H PRSKIVLNE+ S RV + S T VV SS++ + Q LR PRRS RV RYM L +TL V D D EDPLT+ +AM VDK+EWIKA
Subjt: HLPRSKIVLNEMDSS----SARVADGASTSTSVVDPSSSSKV-RSQELRMPRRSERVVRQLERYMGLAKTLVVTPDDDCEDPLTYDQAMAKVDKNEWIKA
Query: MDQEMESMYFNSIWELVDQPDGVKPIGCKWIYKRKRDVDEKVQTFKARLVAKSFTQVEEVDYKETFSPVAMVKSIRILLAIAVYYDYEVWKMDVKTAFMN
M+ E+ESMYFNS+W+LVDQPDGVKPIGCKWIYKRKR D KVQTFKARLVAK +TQVE VDY+ETFSPVAM+KSIRILL+IA Y+DYE+W+MDVKTAF+N
Subjt: MDQEMESMYFNSIWELVDQPDGVKPIGCKWIYKRKRDVDEKVQTFKARLVAKSFTQVEEVDYKETFSPVAMVKSIRILLAIAVYYDYEVWKMDVKTAFMN
Query: DNLDETIYMDQPKGFIAKGQEQKVCRLQRSIYGLKQASRSWNIRFDEAIKSYGFNQNVDEPCVYKKIVNKTIAFLILYVDDILLIGNE------------
NL+ETIYM QP+GFI GQEQK+C+L RSIYGLKQASRSWNIRFD AIKSYGF+Q VDEPCVYK+I+NK++AFL+LYVDDILLIGN+
Subjt: DNLDETIYMDQPKGFIAKGQEQKVCRLQRSIYGLKQASRSWNIRFDEAIKSYGFNQNVDEPCVYKKIVNKTIAFLILYVDDILLIGNE------------
Query: ---------------------------------------------------------------DQCPKTPQKVEDMRRIPYASAVRSLMYAMLCTRPDIC
+QCPKTPQ VE+MR IPYASAV SLMYAMLCTRPDIC
Subjt: ---------------------------------------------------------------DQCPKTPQKVEDMRRIPYASAVRSLMYAMLCTRPDIC
Query: YAVGIVSRYQSNQGLDHWTIVKAILKYLRRMRNYNLVYDRGDLILT------------------------------------GCIANSTMEAEYVVACEA
YAVGIVSRYQSN GL HWT VK ILKYLRR R+Y LVY DLILT GCIA+STMEAEYV ACEA
Subjt: YAVGIVSRYQSNQGLDHWTIVKAILKYLRRMRNYNLVYDRGDLILT------------------------------------GCIANSTMEAEYVVACEA
Query: EKEAVWLRKFMMDLEVVPNMNLSITLFCDNSGAVANSREPRSHKRGKHIERKYHLIREIMHRGDVTVTQIASEHNVADPFIKALTAKVFKGHLESLGLQV
KEAVWLR F++DLEVVPNM+ ITL+CDNSGAVANSREPRSHKRGKHIERKYHLIREI+HRGDV VTQIAS HNVADPF K LTAKVF+GHLESLGL+
Subjt: EKEAVWLRKFMMDLEVVPNMNLSITLFCDNSGAVANSREPRSHKRGKHIERKYHLIREIMHRGDVTVTQIASEHNVADPFIKALTAKVFKGHLESLGLQV
Query: LP
+P
Subjt: LP
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| A0A5D3CPJ6 Gag/pol protein | 1.1e-301 | 61.2 | Show/hide |
Query: RTKRIKVSLKESAHLWHLRLGHINLNKIERLVMSGLLSELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPFELIHSDLCGPMNVKARGGYEYFVSFIDD
+ KR+K+S KE+AHLWHLRLGHINLN+IERLV +GLLSELEENSLPVCESCLEGKMTKRPF+GKG+RAKEP EL+HSDLCGPMNVKARGG+EYF++F DD
Subjt: RTKRIKVSLKESAHLWHLRLGHINLNKIERLVMSGLLSELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPFELIHSDLCGPMNVKARGGYEYFVSFIDD
Query: YLRYGYIYLMYRKSETLEKFKEFKTEVENLL---------------------------------------------------------------------
Y RYGY+YLM KSE LEKFKE+K EVEN L
Subjt: YLRYGYIYLMYRKSETLEKFKEFKTEVENLL---------------------------------------------------------------------
Query: ----VEIAVYILNTVPSKSVCETPFELWHGRKISLRHFRIWGCLTHVLVSNPKKLESRLKLCLFVGYPKETRGDMFFDPKDNRVLVSTNATFLEENHIRD
V+ AVYILN VPSKSV ETP +LW+GRK SLRHFRIWGC HVL +NPKKLE R KLCLFVGYPK TRG F+DPKDN+V VSTNATFLEE+HIR+
Subjt: ----VEIAVYILNTVPSKSVCETPFELWHGRKISLRHFRIWGCLTHVLVSNPKKLESRLKLCLFVGYPKETRGDMFFDPKDNRVLVSTNATFLEENHIRD
Query: HLPRSKIVLNEMDSS----SARVADGASTSTSVVDPSSSSKV-RSQELRMPRRSERVVRQLERYMGLAKTLVVTPDDDCEDPLTYDQAMAKVDKNEWIKA
H PRSKIVLNE+ S RV + S T VV SS++ + Q LR PRRS RV RYM L +TL V D D EDPLT+ +AM VDK+EWIKA
Subjt: HLPRSKIVLNEMDSS----SARVADGASTSTSVVDPSSSSKV-RSQELRMPRRSERVVRQLERYMGLAKTLVVTPDDDCEDPLTYDQAMAKVDKNEWIKA
Query: MDQEMESMYFNSIWELVDQPDGVKPIGCKWIYKRKRDVDEKVQTFKARLVAKSFTQVEEVDYKETFSPVAMVKSIRILLAIAVYYDYEVWKMDVKTAFMN
M+ E+ESMYFNS+W+LVDQPDGVKPIGCKWIYKRKR D KVQTFKARLVAK +TQVE VDY+ETFSPVAM+KSIRILL+IA Y+DYE+W+MDVKTAF+N
Subjt: MDQEMESMYFNSIWELVDQPDGVKPIGCKWIYKRKRDVDEKVQTFKARLVAKSFTQVEEVDYKETFSPVAMVKSIRILLAIAVYYDYEVWKMDVKTAFMN
Query: DNLDETIYMDQPKGFIAKGQEQKVCRLQRSIYGLKQASRSWNIRFDEAIKSYGFNQNVDEPCVYKKIVNKTIAFLILYVDDILLIGNE------------
NL+ETIYM QP+GFI GQEQK+C+L RSIYGLKQASRSWNIRFD AIKSYGF+Q VDEPCVYK+I+NK++AFL+LYVDDILLIGN+
Subjt: DNLDETIYMDQPKGFIAKGQEQKVCRLQRSIYGLKQASRSWNIRFDEAIKSYGFNQNVDEPCVYKKIVNKTIAFLILYVDDILLIGNE------------
Query: ---------------------------------------------------------------DQCPKTPQKVEDMRRIPYASAVRSLMYAMLCTRPDIC
+QCPKTPQ VE+MR IPYASAV SLMYAMLCTRPDIC
Subjt: ---------------------------------------------------------------DQCPKTPQKVEDMRRIPYASAVRSLMYAMLCTRPDIC
Query: YAVGIVSRYQSNQGLDHWTIVKAILKYLRRMRNYNLVYDRGDLILT------------------------------------GCIANSTMEAEYVVACEA
YAVGIVSRYQSN GL HWT VK ILKYLRR R+Y LVY DLILT GCIA+STMEAEYV ACEA
Subjt: YAVGIVSRYQSNQGLDHWTIVKAILKYLRRMRNYNLVYDRGDLILT------------------------------------GCIANSTMEAEYVVACEA
Query: EKEAVWLRKFMMDLEVVPNMNLSITLFCDNSGAVANSREPRSHKRGKHIERKYHLIREIMHRGDVTVTQIASEHNVADPFIKALTAKVFKGHLESLGLQV
KEAVWLR F++DLEVVPNM+ ITL+CDNSGAVANSREPRSHKRGKHIERKYHLIREI+HRGDV VTQIAS HNVADPF K LTAKVF+GHLESLGL+
Subjt: EKEAVWLRKFMMDLEVVPNMNLSITLFCDNSGAVANSREPRSHKRGKHIERKYHLIREIMHRGDVTVTQIASEHNVADPFIKALTAKVFKGHLESLGLQV
Query: LP
+P
Subjt: LP
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 2.1e-73 | 24.43 | Show/hide |
Query: IKVSLKESAHLWHLRLGHINLNKIERLVMSGLLSELE-----ENSLPVCESCLEGKMTKRPFSGKGYRA--KEPFELIHSDLCGPMNVKARGGYEYFVSF
I K + LWH R GHI+ K+ + + S+ E S +CE CL GK + PF + K P ++HSD+CGP+ YFV F
Subjt: IKVSLKESAHLWHLRLGHINLNKIERLVMSGLLSELE-----ENSLPVCESCLEGKMTKRPFSGKGYRA--KEPFELIHSDLCGPMNVKARGGYEYFVSF
Query: IDDYLRYGYIYLMYRKSETLEKFKEFKTEVE---NL----------------------------------------------------------------
+D + Y YL+ KS+ F++F + E NL
Subjt: IDDYLRYGYIYLMYRKSETLEKFKEFKTEVE---NL----------------------------------------------------------------
Query: ------LVEIAVYILNTVPSKSVCE---TPFELWHGRKISLRHFRIWGCLTHVLVSNPK-KLESRLKLCLFVGY--------------------------
V A Y++N +PS+++ + TP+E+WH +K L+H R++G +V + N + K + + +FVGY
Subjt: ------LVEIAVYILNTVPSKSVCE---TPFELWHGRKISLRHFRIWGCLTHVLVSNPK-KLESRLKLCLFVGY--------------------------
Query: -----------------PKETRGDMFFDPKDNRVLVST----------NATFLEEN-------------------------------HIRDHLPRSKIVL
KE+ F P D+R ++ T N FL+++ ++D +K L
Subjt: -----------------PKETRGDMFFDPKDNRVLVST----------NATFLEEN-------------------------------HIRDHLPRSKIVL
Query: NEMDSSSARVADGASTSTSVVDPSSSSKVRSQE-LR---------------MPRRSERV-----VRQLERYMGLAKTLVVTPDDDCEDPLTYDQAMAKVD
NE S + D + S +P+ S + + E L+ + RRSER+ + E L K ++ + P ++D+ + D
Subjt: NEMDSSSARVADGASTSTSVVDPSSSSKVRSQE-LR---------------MPRRSERV-----VRQLERYMGLAKTLVVTPDDDCEDPLTYDQAMAKVD
Query: KNEWIKAMDQEMESMYFNSIWELVDQPDGVKPIGCKWIYKRKRDVDEKVQTFKARLVAKSFTQVEEVDYKETFSPVAMVKSIRILLAIAVYYDYEVWKMD
K+ W +A++ E+ + N+ W + +P+ + +W++ K + +KARLVA+ FTQ ++DY+ETF+PVA + S R +L++ + Y+ +V +MD
Subjt: KNEWIKAMDQEMESMYFNSIWELVDQPDGVKPIGCKWIYKRKRDVDEKVQTFKARLVAKSFTQVEEVDYKETFSPVAMVKSIRILLAIAVYYDYEVWKMD
Query: VKTAFMNDNLDETIYMDQPKGFIAKGQEQKVCRLQRSIYGLKQASRSWNIRFDEAIKSYGFNQNVDEPCVY---KKIVNKTIAFLILYVDDILL------
VKTAF+N L E IYM P+G VC+L ++IYGLKQA+R W F++A+K F + + C+Y K +N+ I +++LYVDD+++
Subjt: VKTAFMNDNLDETIYMDQPKGFIAKGQEQKVCRLQRSIYGLKQASRSWNIRFDEAIKSYGFNQNVDEPCVY---KKIVNKTIAFLILYVDDILL------
Query: ------------------------IG-------------------------NEDQC----PKTPQKV-------EDMRRIPYASAVRSLMYAMLCTRPDI
IG N + C P K+ ++ P S + LMY MLCTRPD+
Subjt: ------------------------IG-------------------------NEDQC----PKTPQKV-------EDMRRIPYASAVRSLMYAMLCTRPDI
Query: CYAVGIVSRYQSNQGLDHWTIVKAILKYLRRMRNYNLVYDRG-----------------------------------DLIL-----TGCIANSTMEAEYV
AV I+SRY S + W +K +L+YL+ + L++ + +LI +A S+ EAEY+
Subjt: CYAVGIVSRYQSNQGLDHWTIVKAILKYLRRMRNYNLVYDRG-----------------------------------DLIL-----TGCIANSTMEAEYV
Query: VACEAEKEAVWLRKFMMDLEVVPNMNLSITLFCDNSGAVANSREPRSHKRGKHIERKYHLIREIMHRGDVTVTQIASEHNVADPFIKALTAKVFKGHLES
EA +EA+WL+ + + + + I ++ DN G ++ + P HKR KHI+ KYH RE + + + I +E+ +AD F K L A F +
Subjt: VACEAEKEAVWLRKFMMDLEVVPNMNLSITLFCDNSGAVANSREPRSHKRGKHIERKYHLIREIMHRGDVTVTQIASEHNVADPFIKALTAKVFKGHLES
Query: LGL
LGL
Subjt: LGL
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.1e-109 | 28.59 | Show/hide |
Query: SAHLWHLRLGHINLNKIERLVMSGLLSELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPFELIHSDLCGPMNVKARGGYEYFVSFIDDYLRYGYIYLMY
S LWH R+GH++ ++ L L+S + ++ C+ CL GK + F R +L++SD+CGPM +++ GG +YFV+FIDD R ++Y++
Subjt: SAHLWHLRLGHINLNKIERLVMSGLLSELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPFELIHSDLCGPMNVKARGGYEYFVSFIDDYLRYGYIYLMY
Query: RKSETLEKFKEF---------------------------------------------------------KTEVENL----------------LVEIAVYI
K + + F++F +T VE + V+ A Y+
Subjt: RKSETLEKFKEF---------------------------------------------------------KTEVENL----------------LVEIAVYI
Query: LNTVPSKSVC-ETPFELWHGRKISLRHFRIWGC--LTHVLVSNPKKLESRLKLCLFVGYPKETRGDMFFDPKDNRVLVSTNATFLEENHIRDHLPRSKIV
+N PS + E P +W +++S H +++GC HV KL+ + C+F+GY E G +DP +V+ S + F E+ +R S+ V
Subjt: LNTVPSKSVC-ETPFELWHGRKISLRHFRIWGC--LTHVLVSNPKKLESRLKLCLFVGYPKETRGDMFFDPKDNRVLVSTNATFLEENHIRDHLPRSKIV
Query: LN-----------------EMDSSSARVADGASTSTSVVDPSSSSKVRSQELRMP----------RRSERVVRQLERYMGLAKTLVVTPDDDCEDPLTYD
N +S++ V++ V++ +E+ P RRSER + RY L+ D +P +
Subjt: LN-----------------EMDSSSARVADGASTSTSVVDPSSSSKVRSQELRMP----------RRSERVVRQLERYMGLAKTLVVTPDDDCEDPLTYD
Query: QAMAKVDKNEWIKAMDQEMESMYFNSIWELVDQPDGVKPIGCKWIYKRKRDVDEKVQTFKARLVAKSFTQVEEVDYKETFSPVAMVKSIRILLAIAVYYD
+ ++ +KN+ +KAM +EMES+ N ++LV+ P G +P+ CKW++K K+D D K+ +KARLV K F Q + +D+ E FSPV + SIR +L++A D
Subjt: QAMAKVDKNEWIKAMDQEMESMYFNSIWELVDQPDGVKPIGCKWIYKRKRDVDEKVQTFKARLVAKSFTQVEEVDYKETFSPVAMVKSIRILLAIAVYYD
Query: YEVWKMDVKTAFMNDNLDETIYMDQPKGFIAKGQEQKVCRLQRSIYGLKQASRSWNIRFDEAIKSYGFNQNVDEPCVY-KKIVNKTIAFLILYVDDILLI
EV ++DVKTAF++ +L+E IYM+QP+GF G++ VC+L +S+YGLKQA R W ++FD +KS + + +PCVY K+ L+LYVDD+L++
Subjt: YEVWKMDVKTAFMNDNLDETIYMDQPKGFIAKGQEQKVCRLQRSIYGLKQASRSWNIRFDEAIKSYGFNQNVDEPCVY-KKIVNKTIAFLILYVDDILLI
Query: G---------------------------------------------------------------------------NEDQCPKTPQKVEDMRRIPYASAV
G ++ CP T ++ +M ++PY+SAV
Subjt: G---------------------------------------------------------------------------NEDQCPKTPQKVEDMRRIPYASAV
Query: RSLMYAMLCTRPDICYAVGIVSRYQSNQGLDHWTIVKAILKYLRRMRNYNLVYDRGDLILTG------------------------------------CI
SLMYAM+CTRPDI +AVG+VSR+ N G +HW VK IL+YLR L + D IL G C+
Subjt: RSLMYAMLCTRPDICYAVGIVSRYQSNQGLDHWTIVKAILKYLRRMRNYNLVYDRGDLILTG------------------------------------CI
Query: ANSTMEAEYVVACEAEKEAVWLRKFMMDLEVVPNMNLSITLFCDNSGAVANSREPRSHKRGKHIERKYHLIREIMHRGDVTVTQIASEHNVADPFIKALT
A ST EAEY+ A E KE +WL++F+ +L + ++CD+ A+ S+ H R KHI+ +YH IRE++ + V +I++ N AD K +
Subjt: ANSTMEAEYVVACEAEKEAVWLRKFMMDLEVVPNMNLSITLFCDNSGAVANSREPRSHKRGKHIERKYHLIREIMHRGDVTVTQIASEHNVADPFIKALT
Query: AKVFKGHLESLGL
F+ E +G+
Subjt: AKVFKGHLESLGL
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| P25600 Putative transposon Ty5-1 protein YCL074W | 7.3e-13 | 24.28 | Show/hide |
Query: MDVKTAFMNDNLDETIYMDQPKGFIAKGQEQKVCRLQRSIYGLKQASRSWNIRFDEAIKSYGFNQNVDEPCVYKKIVNKTIAFLILYVDDILLIGNE---
MDV TAF+N +DE IY+ QP GF+ + V L +YGLKQA WN + +K GF ++ E +Y + + ++ +YVDD+L+
Subjt: MDVKTAFMNDNLDETIYMDQPKGFIAKGQEQKVCRLQRSIYGLKQASRSWNIRFDEAIKSYGFNQNVDEPCVYKKIVNKTIAFLILYVDDILLIGNE---
Query: -DQCPKTPQKVEDMRRI----------------------------------------------------------------PYASAVRSLMYAMLCTRPD
D+ + K+ M+ + PY S V L++ RPD
Subjt: -DQCPKTPQKVEDMRRI----------------------------------------------------------------PYASAVRSLMYAMLCTRPD
Query: ICYAVGIVSRYQSNQGLDHWTIVKAILKYLRRMRNYNLVYDRG
I Y V ++SR+ H + +L+YL R+ L Y G
Subjt: ICYAVGIVSRYQSNQGLDHWTIVKAILKYLRRMRNYNLVYDRG
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.7e-49 | 26.72 | Show/hide |
Query: AMAKVDKNEWIKAMDQEMESMYFNSIWELVDQPDG-VKPIGCKWIYKRKRDVDEKVQTFKARLVAKSFTQVEEVDYKETFSPVAMVKSIRILLAIAVYYD
A+ + W AM E+ + N W+LV P V +GC+WI+ +K + D + +KARLVAK + Q +DY ETFSPV SIRI+L +AV
Subjt: AMAKVDKNEWIKAMDQEMESMYFNSIWELVDQPDG-VKPIGCKWIYKRKRDVDEKVQTFKARLVAKSFTQVEEVDYKETFSPVAMVKSIRILLAIAVYYD
Query: YEVWKMDVKTAFMNDNLDETIYMDQPKGFIAKGQEQKVCRLQRSIYGLKQASRSWNIRFDEAIKSYGFNQNVDEPCVYKKIVNKTIAFLILYVDDILLIG
+ + ++DV AF+ L + +YM QP GFI K + VC+L++++YGLKQA R+W + + + GF +V + ++ K+I ++++YVDDIL+ G
Subjt: YEVWKMDVKTAFMNDNLDETIYMDQPKGFIAKGQEQKVCRLQRSIYGLKQASRSWNIRFDEAIKSYGFNQNVDEPCVYKKIVNKTIAFLILYVDDILLIG
Query: NE-----DQCPKTPQKVE-------------DMRRIP-------------------------------------------------YASAVRSLMYAMLC
N+ + Q+ + +R+P Y V SL Y +
Subjt: NE-----DQCPKTPQKVE-------------DMRRIP-------------------------------------------------YASAVRSLMYAMLC
Query: TRPDICYAVGIVSRYQSNQGLDHWTIVKAILKYLRRMRNYNLVY------------------DRGDLILTG-------------------CIANSTMEAE
TRPDI YAV +S++ +H +K IL+YL N+ + D+ D + T + S+ EAE
Subjt: TRPDICYAVGIVSRYQSNQGLDHWTIVKAILKYLRRMRNYNLVY------------------DRGDLILTG-------------------CIANSTMEAE
Query: YVVACEAEKEAVWLRKFMMDLEVVPNMNLSITLFCDNSGAVANSREPRSHKRGKHIERKYHLIREIMHRGDVTVTQIASEHNVADPFIKALTAKVFKGHL
Y E W+ + +L + + ++CDN GA P H R KHI YH IR + G + V +++ +AD K L+ F+
Subjt: YVVACEAEKEAVWLRKFMMDLEVVPNMNLSITLFCDNSGAVANSREPRSHKRGKHIERKYHLIREIMHRGDVTVTQIASEHNVADPFIKALTAKVFKGHL
Query: ESLGLQVLP
+G+ +P
Subjt: ESLGLQVLP
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.5e-50 | 26.04 | Show/hide |
Query: HLPRSKIVLNEMDSSSARVADGASTSTSVVDP--------SSSSKVRSQELRMPRRSERVVRQLERYMGLAKTLVVTPDDDCEDPLTYDQAMAKVDKNEW
H+P ++E +S S+ +STST + P +++ M R++ +R+ + A +L +P T QAM + W
Subjt: HLPRSKIVLNEMDSSSARVADGASTSTSVVDP--------SSSSKVRSQELRMPRRSERVVRQLERYMGLAKTLVVTPDDDCEDPLTYDQAMAKVDKNEW
Query: IKAMDQEMESMYFNSIWELV-DQPDGVKPIGCKWIYKRKRDVDEKVQTFKARLVAKSFTQVEEVDYKETFSPVAMVKSIRILLAIAVYYDYEVWKMDVKT
+AM E+ + N W+LV P V +GC+WI+ +K + D + +KARLVAK + Q +DY ETFSPV SIRI+L +AV + + ++DV
Subjt: IKAMDQEMESMYFNSIWELV-DQPDGVKPIGCKWIYKRKRDVDEKVQTFKARLVAKSFTQVEEVDYKETFSPVAMVKSIRILLAIAVYYDYEVWKMDVKT
Query: AFMNDNLDETIYMDQPKGFIAKGQEQKVCRLQRSIYGLKQASRSWNIRFDEAIKSYGFNQNVDEPCVYKKIVNKTIAFLILYVDDILLIGNEDQCPK---
AF+ L + +YM QP GF+ K + VCRL+++IYGLKQA R+W + + + GF ++ + ++ ++I ++++YVDDIL+ GN+ K
Subjt: AFMNDNLDETIYMDQPKGFIAKGQEQKVCRLQRSIYGLKQASRSWNIRFDEAIKSYGFNQNVDEPCVYKKIVNKTIAFLILYVDDILLIGNEDQCPK---
Query: -------TPQKVEDM--------RRIP-------------------------------------------------YASAVRSLMYAMLCTRPDICYAVG
+ ++ ED+ +R+P Y V SL Y + TRPD+ YAV
Subjt: -------TPQKVEDM--------RRIP-------------------------------------------------YASAVRSLMYAMLCTRPDICYAVG
Query: IVSRYQSNQGLDHWTIVKAILKYLRRMRNYNLVYDRG------------------DLILTG-------------------CIANSTMEAEYVVACEAEKE
+S+Y DHW +K +L+YL ++ + +G D + T + S+ EAEY E
Subjt: IVSRYQSNQGLDHWTIVKAILKYLRRMRNYNLVYDRG------------------DLILTG-------------------CIANSTMEAEYVVACEAEKE
Query: AVWLRKFMMDLEVVPNMNLSITLFCDNSGAVANSREPRSHKRGKHIERKYHLIREIMHRGDVTVTQIASEHNVADPFIKALTAKVFKGHLESLGLQVLP
W+ + +L + ++ ++CDN GA P H R KHI YH IR + G + V +++ +AD K L+ F+ +G+ +P
Subjt: AVWLRKFMMDLEVVPNMNLSITLFCDNSGAVANSREPRSHKRGKHIERKYHLIREIMHRGDVTVTQIASEHNVADPFIKALTAKVFKGHLESLGLQVLP
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 5.8e-50 | 28.84 | Show/hide |
Query: EDPLTYDQAMAKVDKNEWIKAMDQEMESMYFNSIWELVDQPDGVKPIGCKWIYKRKRDVDEKVQTFKARLVAKSFTQVEEVDYKETFSPVAMVKSIRILL
++P TY++A + W AMD E+ +M WE+ P KPIGCKW+YK K + D ++ +KARLVAK +TQ E +D+ ETFSPV + S++++L
Subjt: EDPLTYDQAMAKVDKNEWIKAMDQEMESMYFNSIWELVDQPDGVKPIGCKWIYKRKRDVDEKVQTFKARLVAKSFTQVEEVDYKETFSPVAMVKSIRILL
Query: AIAVYYDYEVWKMDVKTAFMNDNLDETIYMDQPKGFIAKGQE----QKVCRLQRSIYGLKQASRSWNIRFDEAIKSYGFNQNVDEPCVYKKIVNKTIAFL
AI+ Y++ + ++D+ AF+N +LDE IYM P G+ A+ + VC L++SIYGLKQASR W ++F + +GF Q+ + + KI +
Subjt: AIAVYYDYEVWKMDVKTAFMNDNLDETIYMDQPKGFIAKGQE----QKVCRLQRSIYGLKQASRSWNIRFDEAIKSYGFNQNVDEPCVYKKIVNKTIAFL
Query: ILYVDDILLIGNEDQCP-------KTPQKVEDMRRIPY--------------------------------------------------------ASAVRS
++YVDDI++ N D K+ K+ D+ + Y A A R
Subjt: ILYVDDILLIGNEDQCP-------KTPQKVEDMRRIPY--------------------------------------------------------ASAVRS
Query: LMYAML---CTRPDICYAVGIVSRYQSNQGLDHWTIVKAILKYLRRMRNYNLVYDR---------GDLILTGC---------------------------
L+ ++ TR DI +AV +S++ L H V IL Y++ L Y D C
Subjt: LMYAML---CTRPDICYAVGIVSRYQSNQGLDHWTIVKAILKYLRRMRNYNLVYDR---------GDLILTGC---------------------------
Query: -IANSTMEAEYVVACEAEKEAVWLRKFMMDLEVVPNMNLSITLFCDNSGAVANSREPRSHKRGKHIERKYHLIRE
++ S+ EAEY A E +WL +F +L++ ++ LFCDN+ A+ + H+R KHIE H +RE
Subjt: -IANSTMEAEYVVACEAEKEAVWLRKFMMDLEVVPNMNLSITLFCDNSGAVANSREPRSHKRGKHIERKYHLIRE
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| ATMG00300.1 Gag-Pol-related retrotransposon family protein | 2.9e-09 | 38.16 | Show/hide |
Query: KESAHLWHLRLGHINLNKIERLVMSGLLSELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPFELIHSDLCGPMNV
K+ LWH RL H++ +E LV G L + +SL CE C+ GK + FS + K P + +HSDL G +V
Subjt: KESAHLWHLRLGHINLNKIERLVMSGLLSELEENSLPVCESCLEGKMTKRPFSGKGYRAKEPFELIHSDLCGPMNV
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 5.7e-13 | 40.7 | Show/hide |
Query: WIKAMDQEMESMYFNSIWELVDQPDGVKPIGCKWIYKRKRDVDEKVQTFKARLVAKSFTQVEEVDYKETFSPVAMVKSIRILLAIA
W +AM +E++++ N W LV P +GCKW++K K D + KARLVAK F Q E + + ET+SPV +IR +L +A
Subjt: WIKAMDQEMESMYFNSIWELVDQPDGVKPIGCKWIYKRKRDVDEKVQTFKARLVAKSFTQVEEVDYKETFSPVAMVKSIRILLAIA
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