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Tan0009885 (gene) of Snake gourd v1 genome

Gene IDTan0009885
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionLipid transfer protein
Genome locationLG04:66532753..66533037
RNA-Seq ExpressionTan0009885
SyntenyTan0009885
Gene Ontology termsGO:0006869 - lipid transport (biological process)
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR033872 - Non-specific lipid-transfer protein type 2
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648143.1 hypothetical protein Csa_023893, partial [Cucumis sativus]1.7e-2055.42Show/hide
Query:  LFVVVAVTGAQVATAATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        + + V V  AQ+A AATC+PNE+R C+WAYT S APSS+CC+ V++H+SCYC Y KN  ++SY+QS + KKII+ CG+ +P+C
Subjt:  LFVVVAVTGAQVATAATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC

KAE8648147.1 hypothetical protein Csa_023900, partial [Cucumis sativus]1.3e-2060.81Show/hide
Query:  AQVATAATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        AQ+A AATC+PNE+R C+WAYT S APSS+CC+ V++H+SCYC Y KN  ++SY+QS + KKIIS CG+ +P+C
Subjt:  AQVATAATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC

KAF7112276.1 hypothetical protein RHSIM_RhsimUnG0245900 [Rhododendron simsii]1.9e-1954.74Show/hide
Query:  MKKVFSMTSLC-LFVVVAVTGAQVATAATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        MKK    + LC L VVV +  A+V  A TCNP+EL PCL A+T   APS+ CCNK+KE K C CGY+KN     YV S  AKK++S CGVP+P C
Subjt:  MKKVFSMTSLC-LFVVVAVTGAQVATAATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC

KAF7129124.1 hypothetical protein RHSIM_Rhsim10G0070900 [Rhododendron simsii]1.9e-1954.74Show/hide
Query:  MKKVFSMTSLC-LFVVVAVTGAQVATAATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        MKK    + LC L VVV +  A+V  A TCNP+EL PCL A+T   APS+ CCNK+KE K C CGY+KN     YV S  AKK++S CGVP+P C
Subjt:  MKKVFSMTSLC-LFVVVAVTGAQVATAATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC

PWA39569.1 hypothetical protein CTI12_AA570740 [Artemisia annua]9.5e-1950Show/hide
Query:  MKKVFSMTSLCLFVVVAVTGAQVATAATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        M+K FS   LC FV+V +  AQ   A TCNP ELRPC+   +    PS  CC+K+K  + C+CGY KN     Y+ S +AKK+ SDCGVPIP C
Subjt:  MKKVFSMTSLCLFVVVAVTGAQVATAATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC

TrEMBL top hitse value%identityAlignment
A0A0A0KW09 AAI domain-containing protein5.1e-1850Show/hide
Query:  MKKVFSMTSLCL--------FVVVAVTGAQVATAATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIP
        MKKV   TSLCL         VV  +TGA +A A  CNP E+RPCL A   SV P++ CC K+KE + C+C YLK+  +K Y++S +AKKI + C VPIP
Subjt:  MKKVFSMTSLCL--------FVVVAVTGAQVATAATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIP

Query:  AC
         C
Subjt:  AC

A0A2J6JWV9 AAI domain-containing protein5.1e-1853.01Show/hide
Query:  LFVVVAVTGAQVATAATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        + +V+++TG+Q+ATAATC+  EL PCL A+T S  P++ CC K+KE K C CGY++N   +SYV S +A+K+ S CGVPIP C
Subjt:  LFVVVAVTGAQVATAATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC

A0A2U1MAN6 AAI domain-containing protein4.6e-1950Show/hide
Query:  MKKVFSMTSLCLFVVVAVTGAQVATAATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        M+K FS   LC FV+V +  AQ   A TCNP ELRPC+   +    PS  CC+K+K  + C+CGY KN     Y+ S +AKK+ SDCGVPIP C
Subjt:  MKKVFSMTSLCLFVVVAVTGAQVATAATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC

A0A5A7VF50 Non-specific lipid-transfer protein 2-like1.3e-1849.02Show/hide
Query:  MKKVFSMTSLCL--------FVVVAVTGAQVATAATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIP
        MKKV   ++LCL         VV  +TGA++A A  CNP E+RPCL A   SV P++ CC K+KE + C+C YLK+  +K Y++S +AKKI S CG+PIP
Subjt:  MKKVFSMTSLCL--------FVVVAVTGAQVATAATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIP

Query:  AC
         C
Subjt:  AC

A0A5D3BT00 Non-specific lipid-transfer protein 2-like3.9e-1852.87Show/hide
Query:  LCLFVVVAV--TGAQVATAATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        LCL VVVA+  TG ++  AA+CNP EL PC+ A T S AP++ CC K+++ + CYCGYLK+ KYK+Y +S   + I S C VPIP C
Subjt:  LCLFVVVAV--TGAQVATAATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC

SwissProt top hitse value%identityAlignment
A2XBN5 Non-specific lipid-transfer protein 21.1e-0931.58Show/hide
Query:  MKKVFSMTSLCLFVVVAVTGAQVATA-ATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        M +  ++  L + +V A  G  V  A A+CN  +L  C  A      P++ CC+ ++  + C+C + K+ +Y  YV S +A+K +S CG+ +P C
Subjt:  MKKVFSMTSLCLFVVVAVTGAQVATA-ATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC

P82353 Non-specific lipid-transfer protein 27.3e-1446.27Show/hide
Query:  TCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        TC+P +L PCL          +TCC K++E + C CGYLKN   + YV S +A+K+ S+CGVP+P C
Subjt:  TCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC

P86809 Non-specific lipid-transfer protein 21.6e-1352.31Show/hide
Query:  ATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPI
        ATC+  +L PCL A T +  PS+ CCNK+KE K C CGYLK+   K+YV S  A+K  S CGV +
Subjt:  ATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPI

Q10ST8 Non-specific lipid-transfer protein 21.9e-0931.58Show/hide
Query:  MKKVFSMTSLCLFVVVAVTGAQVATA-ATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        M +  ++  L + +V A  G  V  A A CN  +L  C  A      P++ CC+ ++  + C+C + K+ +Y  YV S +A+K +S CG+ +P C
Subjt:  MKKVFSMTSLCLFVVVAVTGAQVATA-ATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC

Q43681 Probable non-specific lipid-transfer protein AKCS99.2e-1747.42Show/hide
Query:  MKKVFSMTSLCLFVVVA---VTGAQVATAATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        MK    M+ +C  VVVA   +    VA A TCNP EL  C+ A T    PSSTCC+K+K  + C C Y+KN   K YV S  AKK++S+CGV  P C
Subjt:  MKKVFSMTSLCLFVVVA---VTGAQVATAATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC

Arabidopsis top hitse value%identityAlignment
AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.0e-1437.23Show/hide
Query:  MKKVFSMTSLCLFVVVAVTGAQVATAATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        M KV  ++ L L   + +    VA   TC+P +L  C  A T S  PS  CC K++E + C CGY++N   + YV S +A+K+ + C +P P+C
Subjt:  MKKVFSMTSLCLFVVVAVTGAQVATAATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC

AT1G73780.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein6.8e-1543.01Show/hide
Query:  KKVFSMTSLCLFVVVAVTGAQVATAATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        K VF   ++ L ++VA    +VA    CNP +L PCL        PS  CC+KVKE + C C YLKN  +KS++ S +AK I +DC  P P C
Subjt:  KKVFSMTSLCLFVVVAVTGAQVATAATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC

AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein2.0e-1438.3Show/hide
Query:  MKKVFSMTSLCLFVVVAVTGAQVATAATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        M K   ++   L  V+ +  A  A A TC+P +L PC  A T S  PS+ CC K+KE + C CGY++N   + +V + +A+K+   C +PIP C
Subjt:  MKKVFSMTSLCLFVVVAVTGAQVATAATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC

AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein4.9e-1343.28Show/hide
Query:  TCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        TC+  +L  C       V PS+ CC K+KE + C+C Y+K+ +Y  YV S++AKK ++ CGVP P C
Subjt:  TCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC

AT5G38195.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein6.3e-1335.87Show/hide
Query:  MTSLCLFVVVAVTGAQV----ATAATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC
        M  + + VV+ V  + +      +++C P EL PCL A T    P+  CC+K+ E K C CGY+ N  Y ++V S  A+K++  C +P P+C
Subjt:  MTSLCLFVVVAVTGAQV----ATAATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAGTTTTTTCGATGACAAGCCTTTGCCTTTTCGTGGTAGTGGCTGTCACTGGAGCTCAAGTAGCAACGGCGGCAACATGCAACCCCAACGAATTGAGACCTTG
TCTTTGGGCCTACACAATGTCAGTGGCACCATCATCAACTTGCTGCAACAAGGTGAAGGAGCACAAATCGTGCTACTGTGGATACCTCAAAAATCAAAAGTATAAGTCCT
ATGTACAGTCTTCTTCTGCCAAAAAAATCATTTCTGATTGTGGCGTTCCAATCCCCGCATGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAAGTTTTTTCGATGACAAGCCTTTGCCTTTTCGTGGTAGTGGCTGTCACTGGAGCTCAAGTAGCAACGGCGGCAACATGCAACCCCAACGAATTGAGACCTTG
TCTTTGGGCCTACACAATGTCAGTGGCACCATCATCAACTTGCTGCAACAAGGTGAAGGAGCACAAATCGTGCTACTGTGGATACCTCAAAAATCAAAAGTATAAGTCCT
ATGTACAGTCTTCTTCTGCCAAAAAAATCATTTCTGATTGTGGCGTTCCAATCCCCGCATGCTAG
Protein sequenceShow/hide protein sequence
MKKVFSMTSLCLFVVVAVTGAQVATAATCNPNELRPCLWAYTMSVAPSSTCCNKVKEHKSCYCGYLKNQKYKSYVQSSSAKKIISDCGVPIPAC