; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0009934 (gene) of Snake gourd v1 genome

Gene IDTan0009934
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRibosomal RNA small subunit methyltransferase NEP1-like
Genome locationLG04:30993649..31006519
RNA-Seq ExpressionTan0009934
SyntenyTan0009934
Gene Ontology termsGO:0070475 - rRNA base methylation (biological process)
GO:0016020 - membrane (cellular component)
GO:0019843 - rRNA binding (molecular function)
GO:0070037 - rRNA (pseudouridine) methyltransferase activity (molecular function)
InterPro domainsIPR005304 - Ribosomal biogenesis, methyltransferase, EMG1/NEP1
IPR029026 - tRNA (guanine-N1-)-methyltransferase, N-terminal
IPR029028 - Alpha/beta knot methyltransferases


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK19496.1 ribosomal RNA small subunit methyltransferase NEP1-like [Cucumis melo var. makuwa]4.6e-12487.16Show/hide
Query:  MGREILQPCSRKRKVRDDGHSMGEVEGDSTDVLSAHPGIPIFPSNPNMKSGVIFVLEKASLTLALVGKNYQILNQEKHADFLRRKKMDPYKYRPDIVHEA
        MG  ILQPCSRKRKVRDD HS GEV+  S DVL AHPGIP+  SNPNMK  V FVLEKASLTLA VGKNY ILNQEKHA+FLRRK+MDPYKYRPDIVHEA
Subjt:  MGREILQPCSRKRKVRDDGHSMGEVEGDSTDVLSAHPGIPIFPSNPNMKSGVIFVLEKASLTLALVGKNYQILNQEKHADFLRRKKMDPYKYRPDIVHEA

Query:  LVHIMYSRICMAGLVQAVFVRTDEGILIKIDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRAKLLQVVKNPVTQYLPINCLKIGLSSSSTKVVEPQDYF
        LVHIMYSRICMAGLVQAVFVRTDEG+LIK+DPRTRIPESLDEFCDMMSQLLQKLSTKAKG R KLLQVVKNPV QYLP+NC+KIGLSSSS KV+EP+DY 
Subjt:  LVHIMYSRICMAGLVQAVFVRTDEGILIKIDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRAKLLQVVKNPVTQYLPINCLKIGLSSSSTKVVEPQDYF

Query:  KTFSNDVNLVFVVGAMAHGKIDDENIDELISVSGYHLSARVCLRMIYESLAKKYGIW
        KTFSND+NLVFV+GAMAHGKIDDENIDELISVSGYHLSARVCLRMIYESLAKKY IW
Subjt:  KTFSNDVNLVFVVGAMAHGKIDDENIDELISVSGYHLSARVCLRMIYESLAKKYGIW

XP_008448880.1 PREDICTED: ribosomal RNA small subunit methyltransferase NEP1-like [Cucumis melo]1.7e-10290Show/hide
Query:  MKSGVIFVLEKASLTLALVGKNYQILNQEKHADFLRRKKMDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFVRTDEGILIKIDPRTRIPESLDEFCDMM
        MK  V FVLEKASLTLA VGKNY ILNQEKHA+FLRRK+MDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFVRTDEG+LIK+DP TRIPESLDEFCDMM
Subjt:  MKSGVIFVLEKASLTLALVGKNYQILNQEKHADFLRRKKMDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFVRTDEGILIKIDPRTRIPESLDEFCDMM

Query:  SQLLQKLSTKAKGKRAKLLQVVKNPVTQYLPINCLKIGLSSSSTKVVEPQDYFKTFSNDVNLVFVVGAMAHGKIDDENIDELISVSGYHLSARVCLRMIY
        SQLLQKLSTKAKG R KLLQVVKNPV QYLP+NC+KIGLSSSS KV+EP+DY KTFSNDVNLVFV+GAMAHGKIDDENIDELISVSGYHLSARVCLRMIY
Subjt:  SQLLQKLSTKAKGKRAKLLQVVKNPVTQYLPINCLKIGLSSSSTKVVEPQDYFKTFSNDVNLVFVVGAMAHGKIDDENIDELISVSGYHLSARVCLRMIY

Query:  ESLAKKYGIW
        ESLAKKY IW
Subjt:  ESLAKKYGIW

XP_022150056.1 ribosomal RNA small subunit methyltransferase NEP1-like [Momordica charantia]4.2e-11782.1Show/hide
Query:  MGREILQPCSRKRKVRDDGHSMGEVEGDSTDVLSAHPGIPIFPSNPNMKSGVIFVLEKASLTLALVGKNYQILNQEKHADFLRRKKMDPYKYRPDIVHEA
        MG +ILQPCSRKRKVRD  H++ EVEG   DVLS  PGIP+ PSN NMKS VIFVL+KASLTLALVGK YQILNQEKHADFLR+K+MDPY+YRPDI+HEA
Subjt:  MGREILQPCSRKRKVRDDGHSMGEVEGDSTDVLSAHPGIPIFPSNPNMKSGVIFVLEKASLTLALVGKNYQILNQEKHADFLRRKKMDPYKYRPDIVHEA

Query:  LVHIMYSRICMAGLVQAVFVRTDEGILIKIDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRAKLLQVVKNPVTQYLPINCLKIGLSSSSTKVVEPQDYF
        LVHIM+SRICMAG+V+AVF++TD GILI++DPRTRIPESLDEFCDMMSQLLQK STKAKGKR KLLQ+VKNP+TQYLPINC+KIGL+SSSTKVVEP+DYF
Subjt:  LVHIMYSRICMAGLVQAVFVRTDEGILIKIDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRAKLLQVVKNPVTQYLPINCLKIGLSSSSTKVVEPQDYF

Query:  KTFSNDVNLVFVVGAMAHGKIDDENIDELISVSGYHLSARVCLRMIYESLAKKYGIW
         TFSNDVN VFV+GAM H KID E IDE+ISVSG+HLSARVCLRMIYESLAKKYGIW
Subjt:  KTFSNDVNLVFVVGAMAHGKIDDENIDELISVSGYHLSARVCLRMIYESLAKKYGIW

XP_028952119.1 ribosomal RNA small subunit methyltransferase NEP1-like [Malus domestica]3.8e-7861.48Show/hide
Query:  MGREILQPCSRKRKVRDDGHSMGEVEGDST-DVLSAHPGIPIFPSNPNMKSGVIFVLEKASLTLALVGKNYQILNQEKHADFLRRKKMDPYKYRPDIVHE
        M R+ L+ CSR +  +D     G +E DS  D +   PGIP+ PS+ NM  GV FVLEKASL  A VGKNYQILN E H DFLR+K MDPYKYRPDIVHE
Subjt:  MGREILQPCSRKRKVRDDGHSMGEVEGDST-DVLSAHPGIPIFPSNPNMKSGVIFVLEKASLTLALVGKNYQILNQEKHADFLRRKKMDPYKYRPDIVHE

Query:  ALVHIMYSRICMAGLVQAVFVRTDEGILIKIDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRAKLLQVVKNPVTQYLPINCLKIGLSSSSTKVVEPQDY
        AL+ IM +R+CMAG +Q V+V+TD+G+LIK++P  RIPESLD+FC MMSQLLQKL  KAKG+R  LL+VV+NP++Q+LP N +KIGLS SS K V+ ++Y
Subjt:  ALVHIMYSRICMAGLVQAVFVRTDEGILIKIDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRAKLLQVVKNPVTQYLPINCLKIGLSSSSTKVVEPQDY

Query:  FKTFSNDVNLVFVVGAMAHGKIDDENIDELISVSGYHLSARVCLRMIYESLAKKYGI
            SN+ NLVFVVGAMAHGKID E  D+ ISVSGY LSA VCLR I  +L +K+ I
Subjt:  FKTFSNDVNLVFVVGAMAHGKIDDENIDELISVSGYHLSARVCLRMIYESLAKKYGI

XP_031745076.1 ribosomal RNA small subunit methyltransferase NEP1-like [Cucumis sativus]1.2e-7989.53Show/hide
Query:  MDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFVRTDEGILIKIDPRTRIPESLDE-FCDMMSQLLQKLSTKAKGKRAKLLQVVKNPVTQYLPINCLKIG
        MDPYKYRPDIVH ALVHIMYSRI MAGLVQAVF+RTDEGILIK+DPRTRIPESLDE FCDM+SQLLQKLSTKAKG   KLLQVVKNPV QYLP+NCLKIG
Subjt:  MDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFVRTDEGILIKIDPRTRIPESLDE-FCDMMSQLLQKLSTKAKGKRAKLLQVVKNPVTQYLPINCLKIG

Query:  LSSSSTKVVEPQDYFKTFSNDVNLVFVVGAMAHGKIDDENIDELISVSGYHLSARVCLRMIYESLAKKYGIW
        LSSSS KVVEP+DY KTFSNDVNLVFV+GAMAHGKID+ENIDELISVSGYHLSARVCLRMIYESL  KYGIW
Subjt:  LSSSSTKVVEPQDYFKTFSNDVNLVFVVGAMAHGKIDDENIDELISVSGYHLSARVCLRMIYESLAKKYGIW

TrEMBL top hitse value%identityAlignment
A0A1S3BLD0 ribosomal RNA small subunit methyltransferase NEP1-like8.2e-10390Show/hide
Query:  MKSGVIFVLEKASLTLALVGKNYQILNQEKHADFLRRKKMDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFVRTDEGILIKIDPRTRIPESLDEFCDMM
        MK  V FVLEKASLTLA VGKNY ILNQEKHA+FLRRK+MDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFVRTDEG+LIK+DP TRIPESLDEFCDMM
Subjt:  MKSGVIFVLEKASLTLALVGKNYQILNQEKHADFLRRKKMDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFVRTDEGILIKIDPRTRIPESLDEFCDMM

Query:  SQLLQKLSTKAKGKRAKLLQVVKNPVTQYLPINCLKIGLSSSSTKVVEPQDYFKTFSNDVNLVFVVGAMAHGKIDDENIDELISVSGYHLSARVCLRMIY
        SQLLQKLSTKAKG R KLLQVVKNPV QYLP+NC+KIGLSSSS KV+EP+DY KTFSNDVNLVFV+GAMAHGKIDDENIDELISVSGYHLSARVCLRMIY
Subjt:  SQLLQKLSTKAKGKRAKLLQVVKNPVTQYLPINCLKIGLSSSSTKVVEPQDYFKTFSNDVNLVFVVGAMAHGKIDDENIDELISVSGYHLSARVCLRMIY

Query:  ESLAKKYGIW
        ESLAKKY IW
Subjt:  ESLAKKYGIW

A0A498KD62 Uncharacterized protein4.1e-7861.09Show/hide
Query:  MGREILQPCSRKRKVRDDGHSMGEVEGDST-DVLSAHPGIPIFPSNPNMKSGVIFVLEKASLTLALVGKNYQILNQEKHADFLRRKKMDPYKYRPDIVHE
        M R+ L+ CSR +  +D     G +E DS  D +   PGIP+ PS+ NM  GV FVLEKASL  A VGK YQILN E H DFLR+K MDPYKYRPDIVHE
Subjt:  MGREILQPCSRKRKVRDDGHSMGEVEGDST-DVLSAHPGIPIFPSNPNMKSGVIFVLEKASLTLALVGKNYQILNQEKHADFLRRKKMDPYKYRPDIVHE

Query:  ALVHIMYSRICMAGLVQAVFVRTDEGILIKIDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRAKLLQVVKNPVTQYLPINCLKIGLSSSSTKVVEPQDY
        AL+ IM +R+CMAG +Q V+V+TD+G+LIK++P  RIPESLD+FC MMSQLLQKL  KAKG+R  LL+VV+NP++Q+LP N +KIGLS SS K V+ ++Y
Subjt:  ALVHIMYSRICMAGLVQAVFVRTDEGILIKIDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRAKLLQVVKNPVTQYLPINCLKIGLSSSSTKVVEPQDY

Query:  FKTFSNDVNLVFVVGAMAHGKIDDENIDELISVSGYHLSARVCLRMIYESLAKKYGI
            SN+ NLVFVVGAMAHGKID E +D+ ISVSGY LSA VCLR I  +L +K+ I
Subjt:  FKTFSNDVNLVFVVGAMAHGKIDDENIDELISVSGYHLSARVCLRMIYESLAKKYGI

A0A5D3D7D3 Ribosomal RNA small subunit methyltransferase NEP1-like2.2e-12487.16Show/hide
Query:  MGREILQPCSRKRKVRDDGHSMGEVEGDSTDVLSAHPGIPIFPSNPNMKSGVIFVLEKASLTLALVGKNYQILNQEKHADFLRRKKMDPYKYRPDIVHEA
        MG  ILQPCSRKRKVRDD HS GEV+  S DVL AHPGIP+  SNPNMK  V FVLEKASLTLA VGKNY ILNQEKHA+FLRRK+MDPYKYRPDIVHEA
Subjt:  MGREILQPCSRKRKVRDDGHSMGEVEGDSTDVLSAHPGIPIFPSNPNMKSGVIFVLEKASLTLALVGKNYQILNQEKHADFLRRKKMDPYKYRPDIVHEA

Query:  LVHIMYSRICMAGLVQAVFVRTDEGILIKIDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRAKLLQVVKNPVTQYLPINCLKIGLSSSSTKVVEPQDYF
        LVHIMYSRICMAGLVQAVFVRTDEG+LIK+DPRTRIPESLDEFCDMMSQLLQKLSTKAKG R KLLQVVKNPV QYLP+NC+KIGLSSSS KV+EP+DY 
Subjt:  LVHIMYSRICMAGLVQAVFVRTDEGILIKIDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRAKLLQVVKNPVTQYLPINCLKIGLSSSSTKVVEPQDYF

Query:  KTFSNDVNLVFVVGAMAHGKIDDENIDELISVSGYHLSARVCLRMIYESLAKKYGIW
        KTFSND+NLVFV+GAMAHGKIDDENIDELISVSGYHLSARVCLRMIYESLAKKY IW
Subjt:  KTFSNDVNLVFVVGAMAHGKIDDENIDELISVSGYHLSARVCLRMIYESLAKKYGIW

A0A5E4F699 PREDICTED: ribosomal RNA small subunit4.1e-7860.7Show/hide
Query:  MGREILQPCS-RKRKVRDDGHSMGEVEGDSTDVLSAHPGIPIFPSNPNMKSGVIFVLEKASLTLALVGKNYQILNQEKHADFLRRKKMDPYKYRPDIVHE
        M R+ L PCS R  K R  G   GE E +  D +   PGIP+ PSN N+  GV FVLEKASL  A VG+ YQILN + HADFLRRKKMDPYKYRPDIVHE
Subjt:  MGREILQPCS-RKRKVRDDGHSMGEVEGDSTDVLSAHPGIPIFPSNPNMKSGVIFVLEKASLTLALVGKNYQILNQEKHADFLRRKKMDPYKYRPDIVHE

Query:  ALVHIMYSRICMAGLVQAVFVRTDEGILIKIDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRAKLLQVVKNPVTQYLPINCLKIGLSSSSTKVVEPQDY
        AL  IM +R+C AG + AV+++TDEG+LIK++P   IPESL++FC MMSQLLQKLS K+ G+R +LL+VVKNP+ ++LP N LKIGLS SS K V+ +DY
Subjt:  ALVHIMYSRICMAGLVQAVFVRTDEGILIKIDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRAKLLQVVKNPVTQYLPINCLKIGLSSSSTKVVEPQDY

Query:  FKTFSNDVNLVFVVGAMAHGKIDDENIDELISVSGYHLSARVCLRMIYESLAKKYGI
            S++VNLVFVVGAMAHG+ID EN D++ISVS Y LSA VCL  I  +L +K+ I
Subjt:  FKTFSNDVNLVFVVGAMAHGKIDDENIDELISVSGYHLSARVCLRMIYESLAKKYGI

A0A6J1DAB0 ribosomal RNA small subunit methyltransferase NEP1-like2.0e-11782.1Show/hide
Query:  MGREILQPCSRKRKVRDDGHSMGEVEGDSTDVLSAHPGIPIFPSNPNMKSGVIFVLEKASLTLALVGKNYQILNQEKHADFLRRKKMDPYKYRPDIVHEA
        MG +ILQPCSRKRKVRD  H++ EVEG   DVLS  PGIP+ PSN NMKS VIFVL+KASLTLALVGK YQILNQEKHADFLR+K+MDPY+YRPDI+HEA
Subjt:  MGREILQPCSRKRKVRDDGHSMGEVEGDSTDVLSAHPGIPIFPSNPNMKSGVIFVLEKASLTLALVGKNYQILNQEKHADFLRRKKMDPYKYRPDIVHEA

Query:  LVHIMYSRICMAGLVQAVFVRTDEGILIKIDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRAKLLQVVKNPVTQYLPINCLKIGLSSSSTKVVEPQDYF
        LVHIM+SRICMAG+V+AVF++TD GILI++DPRTRIPESLDEFCDMMSQLLQK STKAKGKR KLLQ+VKNP+TQYLPINC+KIGL+SSSTKVVEP+DYF
Subjt:  LVHIMYSRICMAGLVQAVFVRTDEGILIKIDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRAKLLQVVKNPVTQYLPINCLKIGLSSSSTKVVEPQDYF

Query:  KTFSNDVNLVFVVGAMAHGKIDDENIDELISVSGYHLSARVCLRMIYESLAKKYGIW
         TFSNDVN VFV+GAM H KID E IDE+ISVSG+HLSARVCLRMIYESLAKKYGIW
Subjt:  KTFSNDVNLVFVVGAMAHGKIDDENIDELISVSGYHLSARVCLRMIYESLAKKYGIW

SwissProt top hitse value%identityAlignment
O35130 Ribosomal RNA small subunit methyltransferase NEP15.2e-3840.98Show/hide
Query:  VIFVLEKASLTLALVGKNYQILNQEKHADFLRRKKMDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFVRTDEGILIKIDPRTRIPESLDEFCDMMSQLL
        +I VLE ASL    VGK Y++LN ++H   L +   DP + RPDI H++L+ +M S +  AGL+Q V++ T + +LI+++P+TRIP + D FC +M QLL
Subjt:  VIFVLEKASLTLALVGKNYQILNQEKHADFLRRKKMDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFVRTDEGILIKIDPRTRIPESLDEFCDMMSQLL

Query:  QKLSTKAKGKRAKLLQVVKNPVTQYLPINCLKIGLSSSSTKVVEPQDYFKTFSNDVNLVFVVGAMAHGKIDDENIDELISVSGYHLSARVCLRMIYESLA
         KLS +A     KLL+V+KNPV+ + P+ C+KIG S S   V +  D  +   +   +VFVVGA AHGK+  E  ++++S+S Y LSA +    +  +  
Subjt:  QKLSTKAKGKRAKLLQVVKNPVTQYLPINCLKIGLSSSSTKVVEPQDYFKTFSNDVNLVFVVGAMAHGKIDDENIDELISVSGYHLSARVCLRMIYESLA

Query:  KKYGI
        + +G+
Subjt:  KKYGI

Q06287 Ribosomal RNA small subunit methyltransferase NEP11.4e-3038.1Show/hide
Query:  PIFPSNPNMKSGVIFVLEKASLTLALVGKN------YQILNQEKHADFLRRKKMDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFVRTDEGILIKIDPR
        P+  S   +   +I VL  ASL    +  N      Y +LN + H   L++   D  + RPDI H+ L+ ++ S I  AG +Q V+++T  GILI+++P 
Subjt:  PIFPSNPNMKSGVIFVLEKASLTLALVGKN------YQILNQEKHADFLRRKKMDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFVRTDEGILIKIDPR

Query:  TRIPESLDEFCDMMSQLLQKLSTKAKGKRAKLLQVVKNPVTQYLPINCLKIGLSSSSTKVVEPQDYFKTFSNDVNLVFVVGAMAHGK--IDDENIDELIS
         RIP +   F  +M QLL KLS ++     KLL+V+KNP+T +LP  C K+ LS  +  V+  QDY +   +D ++   VGAMA GK    DE +DE + 
Subjt:  TRIPESLDEFCDMMSQLLQKLSTKAKGKRAKLLQVVKNPVTQYLPINCLKIGLSSSSTKVVEPQDYFKTFSNDVNLVFVVGAMAHGK--IDDENIDELIS

Query:  VSGYHLSARV
        +S Y LSA V
Subjt:  VSGYHLSARV

Q92979 Ribosomal RNA small subunit methyltransferase NEP13.1e-3839.37Show/hide
Query:  PSNPNMKSG-------VIFVLEKASLTLALVGKNYQILNQEKHADFLRRKKMDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFVRTDEGILIKIDPRTR
        P  P + +G       +I VLE ASL    VGK Y++LN +KH   L +   DP + RPDI H++L+ +M S +  AGL+Q V++ T + +LI+++P+TR
Subjt:  PSNPNMKSG-------VIFVLEKASLTLALVGKNYQILNQEKHADFLRRKKMDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFVRTDEGILIKIDPRTR

Query:  IPESLDEFCDMMSQLLQKLSTKAKGKRAKLLQVVKNPVTQYLPINCLKIGLSSSSTKVVEPQDYFKTFSNDVNLVFVVGAMAHGKIDDENIDELISVSGY
        IP + D FC +M QLL KLS +A     KLL+V+KNPV+ + P+ C+K+G S S   V    D  +   +   +VFVVGA AHGK+  E  ++++S+S Y
Subjt:  IPESLDEFCDMMSQLLQKLSTKAKGKRAKLLQVVKNPVTQYLPINCLKIGLSSSSTKVVEPQDYFKTFSNDVNLVFVVGAMAHGKIDDENIDELISVSGY

Query:  HLSARVCLRMIYESLAKKYGI
         LSA +    +  +  + +G+
Subjt:  HLSARVCLRMIYESLAKKYGI

Q9W4J5 Ribosomal RNA small subunit methyltransferase NEP14.3e-3236.19Show/hide
Query:  VIFVLEKASLTLALVGKNYQILNQEKHADFLRRKKMDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFVRTDEGILIKIDPRTRIPESLDEFCDMMSQLL
        +I VLE A L    V   +++LN + HA  +R+ + DP   RPDI H+ L+ +  S +  AGL+Q VFVRT+  +LI+I+P+TRIP +   F  +M QLL
Subjt:  VIFVLEKASLTLALVGKNYQILNQEKHADFLRRKKMDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFVRTDEGILIKIDPRTRIPESLDEFCDMMSQLL

Query:  QKLSTKAKGKRAKLLQVVKNPVTQYLPINCLKIGLSSS-----STKVVEPQDYFKTFSNDVNLVFVVGAMAHGKIDDENIDELISVSGYHLSARVCLRMI
         K   +A     +L+ V+KNP+T ++P+ C K  +S S     + + + P     + S D  +V V+GA AHG +  +  +EL S+S Y LSA +    I
Subjt:  QKLSTKAKGKRAKLLQVVKNPVTQYLPINCLKIGLSSS-----STKVVEPQDYFKTFSNDVNLVFVVGAMAHGKIDDENIDELISVSGYHLSARVCLRMI

Query:  YESLAKKYGI
          +  + +G+
Subjt:  YESLAKKYGI

Q9XX15 Ribosomal RNA small subunit methyltransferase nep-15.1e-3339.42Show/hide
Query:  VLEKASLTLALVGKNYQILNQEKHADFLRRKKMDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFVRTDEGILIKIDPRTRIPESLDEFCDMMSQLLQKL
        VLE  SL  A VG  Y IL+ +KHA+FLR++K DP  YRPDI+H+ L++++ S +  AG ++ VF RT + +L+ + P+ RIP + D FC +M QLL KL
Subjt:  VLEKASLTLALVGKNYQILNQEKHADFLRRKKMDPYKYRPDIVHEALVHIMYSRICMAGLVQAVFVRTDEGILIKIDPRTRIPESLDEFCDMMSQLLQKL

Query:  STKAKGKRAKLLQVVKNPVTQYLPINCLKIGLS------SSSTKVVEPQDYFKTFSNDVNLVFVVGAMAHGKIDDENIDELISVSGYHLSARVCLRMIYE
        S +A     KL+ VVKNPV+ +LP+   K+ +S      + + K+V P+        D  LV ++G +A GKI  +  D    +S Y LSA +    +  
Subjt:  STKAKGKRAKLLQVVKNPVTQYLPINCLKIGLS------SSSTKVVEPQDYFKTFSNDVNLVFVVGAMAHGKIDDENIDELISVSGYHLSARVCLRMIYE

Query:  SLAKKYGI
         L + +GI
Subjt:  SLAKKYGI

Arabidopsis top hitse value%identityAlignment
AT3G57000.1 nucleolar essential protein-related7.0e-5447.2Show/hide
Query:  SRKRKVRDDGHSMGEVEGDSTDVLSAHPGIPIFPSNPNM-KSGVIFVLEKASLTLALVGKNYQILNQEKHADFLRRKKMDPYKYRPDIVHEALVHIMYSR
        SR  +  D+     E    + D++    GIPI  + PN  KSG++FVLEKASL +A VGK YQ+LN + HA+FL++   +P  YRPDI H+AL+ I+ S 
Subjt:  SRKRKVRDDGHSMGEVEGDSTDVLSAHPGIPIFPSNPNM-KSGVIFVLEKASLTLALVGKNYQILNQEKHADFLRRKKMDPYKYRPDIVHEALVHIMYSR

Query:  ICMAGLVQAVFVRTDEGILIKIDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRAKLLQVVKNPVTQ-YLPINCLKIGLSSSSTKVVEPQDYFKTF-SND
        +  AG ++AV+VRT++G+L ++ P  RIP +   F  +M QLLQKLS  A   R KLL+ VKNP+ + +LP+N  +IG S SS K+V  Q +  T   +D
Subjt:  ICMAGLVQAVFVRTDEGILIKIDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRAKLLQVVKNPVTQ-YLPINCLKIGLSSSSTKVVEPQDYFKTF-SND

Query:  VNLVFVVGAMAHGKIDDENIDELISVSGYHLSARVCLRMIYESLAKKYGI
         + VFVVGAMAHGKID   IDE +SVS Y LSA  C+  I E+LA  + I
Subjt:  VNLVFVVGAMAHGKIDDENIDELISVSGYHLSARVCLRMIYESLAKKYGI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGAGAGATCTTACAACCTTGTTCAAGGAAAAGGAAGGTGAGAGATGATGGGCATAGTATGGGTGAGGTTGAAGGGGACTCTACAGATGTTTTGAGTGCACATCC
TGGTATTCCAATTTTTCCTTCAAATCCGAACATGAAATCTGGAGTTATTTTTGTTCTTGAGAAGGCTTCTTTGACTCTTGCCCTTGTTGGAAAGAACTATCAAATTTTGA
ATCAAGAAAAACATGCTGACTTCTTGCGGAGGAAGAAAATGGATCCATACAAGTATAGGCCTGATATAGTTCATGAGGCTCTTGTTCACATCATGTATTCTCGAATTTGT
ATGGCTGGATTAGTTCAGGCTGTGTTTGTAAGAACTGACGAAGGAATTCTAATCAAAATTGATCCACGTACTCGTATTCCAGAATCATTGGACGAGTTTTGTGATATGAT
GTCTCAATTGTTGCAAAAGCTGAGCACTAAAGCCAAAGGCAAACGTGCAAAACTATTGCAAGTGGTCAAAAATCCTGTGACCCAATACTTACCTATCAATTGCTTGAAGA
TCGGCCTTTCTTCAAGTTCAACAAAGGTGGTTGAACCGCAAGATTACTTCAAAACTTTCAGTAACGATGTCAATCTAGTGTTTGTGGTTGGTGCAATGGCTCATGGCAAG
ATCGATGATGAAAACATAGATGAATTGATATCAGTTTCTGGATATCACCTAAGCGCTAGAGTTTGTCTACGCATGATATACGAGAGCTTGGCTAAGAAATATGGAATTTG
GTGA
mRNA sequenceShow/hide mRNA sequence
AAGGAATTAAAAAGAAGAAAAGAGAAGCCCTAATTCAACTCTTTCTTCTCCCTTATTCTCGTGAAACCCAACAACCCACTCCCTCTCGATTTCCTTCTCCGGTGACAGCA
ACCCACGACGAAGCTTCAGGAGAACCAGAGGACGGCGTAGGTGCCATCACCGGAGATTTAGCCACATGAGGCGCGGGCGAGGAAGGTGTCCCAACAAGCTCACACCGATG
ACAAAGTGAAGGGTCGTATTCTCCGATAGCAACAACAGGTCCACAAATCCACGTAATTTGGAGTCTCGAACTACTTTAATCAAGTGACCCACACTGAGTTTCGTTGTCTT
GAAAGGAGAAAAATGGGAAGAGAGATCTTACAACCTTGTTCAAGGAAAAGGAAGGTGAGAGATGATGGGCATAGTATGGGTGAGGTTGAAGGGGACTCTACAGATGTTTT
GAGTGCACATCCTGGTATTCCAATTTTTCCTTCAAATCCGAACATGAAATCTGGAGTTATTTTTGTTCTTGAGAAGGCTTCTTTGACTCTTGCCCTTGTTGGAAAGAACT
ATCAAATTTTGAATCAAGAAAAACATGCTGACTTCTTGCGGAGGAAGAAAATGGATCCATACAAGTATAGGCCTGATATAGTTCATGAGGCTCTTGTTCACATCATGTAT
TCTCGAATTTGTATGGCTGGATTAGTTCAGGCTGTGTTTGTAAGAACTGACGAAGGAATTCTAATCAAAATTGATCCACGTACTCGTATTCCAGAATCATTGGACGAGTT
TTGTGATATGATGTCTCAATTGTTGCAAAAGCTGAGCACTAAAGCCAAAGGCAAACGTGCAAAACTATTGCAAGTGGTCAAAAATCCTGTGACCCAATACTTACCTATCA
ATTGCTTGAAGATCGGCCTTTCTTCAAGTTCAACAAAGGTGGTTGAACCGCAAGATTACTTCAAAACTTTCAGTAACGATGTCAATCTAGTGTTTGTGGTTGGTGCAATG
GCTCATGGCAAGATCGATGATGAAAACATAGATGAATTGATATCAGTTTCTGGATATCACCTAAGCGCTAGAGTTTGTCTACGCATGATATACGAGAGCTTGGCTAAGAA
ATATGGAATTTGGTGAATTCACAACAGATCCTTGTACAACCACCAAAGTTTGCAGCATCATCAATATGCTTTTAAACATGCCCC
Protein sequenceShow/hide protein sequence
MGREILQPCSRKRKVRDDGHSMGEVEGDSTDVLSAHPGIPIFPSNPNMKSGVIFVLEKASLTLALVGKNYQILNQEKHADFLRRKKMDPYKYRPDIVHEALVHIMYSRIC
MAGLVQAVFVRTDEGILIKIDPRTRIPESLDEFCDMMSQLLQKLSTKAKGKRAKLLQVVKNPVTQYLPINCLKIGLSSSSTKVVEPQDYFKTFSNDVNLVFVVGAMAHGK
IDDENIDELISVSGYHLSARVCLRMIYESLAKKYGIW