CuGenDBv2

Gene ID	Tan0009975
Organism	Trichosanthes anguina (Snake gourd v1)
Description	TPR_REGION domain-containing protein
Genome location	LG02:93289313..93290951
RNA-Seq Expression	Tan0009975
Synteny	Tan0009975
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0005515 - protein binding (molecular function) GO:0016740 - transferase activity (molecular function)
InterPro domains	IPR011990 - Tetratricopeptide-like helical domain superfamily IPR013105 - Tetratricopeptide repeat 2 IPR019734 - Tetratricopeptide repeat

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004152601.1 uncharacterized protein LOC101214199 [Cucumis sativus]

6.9e-94

94.31

Show/hide

Query:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI
        MVTDILLQIALILVMVVMFLAMHNIPQR+FAKLRLRFR++VESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALD 
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLAAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYFWLGKCYEMKKLRGEAKKSYEEALNIEPRLSN
        QGFKTSALESLDTALSPL AKSLS+EERGDALFKRAELKMSTNRRALVDSALADLTESVTLS+NAN+Y+WLGKCYE KKLR EAKK+YEEALNIEPRLSN
Subjt:  QGFKTSALESLDTALSPLAAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYFWLGKCYEMKKLRGEAKKSYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

XP_008444918.1 PREDICTED: uncharacterized protein LOC103488119 [Cucumis melo]

4.8e-95

94.79

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Query:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI
        MVTDILLQIALILVMVVMFLAMHNIPQR+FAKLRLRFR++VESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALD+
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLAAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYFWLGKCYEMKKLRGEAKKSYEEALNIEPRLSN
        QGFKTSALESLDTALSPL AKSLS+EERGDALFKRAELKMSTNRRALVDSALADLTESVTLS+NAN+Y+WLGKCYEMKKLR EAKK+YEEALNIEPRLSN
Subjt:  QGFKTSALESLDTALSPLAAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYFWLGKCYEMKKLRGEAKKSYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

XP_022951869.1 uncharacterized protein LOC111454602 [Cucurbita moschata]

5.3e-94

94.31

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Query:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI
        MV DILLQIALILVMVVMFLAMHNIPQRFFAKLR RFR+DVESKRHFVRGAQLLARARSAPSRSSATSLAE+VVAEA+KAIALDPKDAAAHILKALALDI
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLAAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYFWLGKCYEMKKLRGEAKKSYEEALNIEPRLSN
        QGFKTSALESLDTALSPLAAKSLSNEERGDAL+KRAELKMSTNRR +VDSALADLTESVTLS+NANAY WLGKCYEMKKLRGEAKK+YEEALNIEPRLS 
Subjt:  QGFKTSALESLDTALSPLAAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYFWLGKCYEMKKLRGEAKKSYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

XP_023537835.1 uncharacterized protein LOC111798743 [Cucurbita pepo subsp. pepo]

1.8e-94

94.79

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Query:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI
        MV DILLQIALILVMVVMFLAMHNIPQRFFAKLR RFR+DVESKRHFVRGAQLLARARSAPSRSSATSLAE+VVAEA+KAIALDPKDAAAHILKALALDI
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLAAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYFWLGKCYEMKKLRGEAKKSYEEALNIEPRLSN
        QGFKTSALESLDTALSPLAAKSLSNEERGDAL+KRAELKMSTNRRA+VDSALADLTESVTLS+NANAY WLGKCYEMKKLRGEAKK+YEEALNIEPRLS 
Subjt:  QGFKTSALESLDTALSPLAAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYFWLGKCYEMKKLRGEAKKSYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

XP_038884950.1 uncharacterized protein LOC120075535 [Benincasa hispida]

1.4e-94

94.31

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Query:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI
        MVTDILLQI LILVMVVMFLAMHNIPQR+FAKLRLRFR++VESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEA+KAIALDPKDAAAHILKALALDI
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLAAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYFWLGKCYEMKKLRGEAKKSYEEALNIEPRLSN
        QGFKTSALESLDTALSPL AKSLS+EERGDALFKRAELKMSTNRRALVDSALADLTESVTLS+NAN+Y+WLGKCYE+KKLRGEAKK+YEEALNIEPRLSN
Subjt:  QGFKTSALESLDTALSPLAAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYFWLGKCYEMKKLRGEAKKSYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LPL8 TPR_REGION domain-containing protein

3.4e-94

94.31

Show/hide

Query:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI
        MVTDILLQIALILVMVVMFLAMHNIPQR+FAKLRLRFR++VESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALD 
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLAAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYFWLGKCYEMKKLRGEAKKSYEEALNIEPRLSN
        QGFKTSALESLDTALSPL AKSLS+EERGDALFKRAELKMSTNRRALVDSALADLTESVTLS+NAN+Y+WLGKCYE KKLR EAKK+YEEALNIEPRLSN
Subjt:  QGFKTSALESLDTALSPLAAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYFWLGKCYEMKKLRGEAKKSYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

A0A1S3BC86 uncharacterized protein LOC103488119

2.3e-95

94.79

Show/hide

Query:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI
        MVTDILLQIALILVMVVMFLAMHNIPQR+FAKLRLRFR++VESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALD+
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLAAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYFWLGKCYEMKKLRGEAKKSYEEALNIEPRLSN
        QGFKTSALESLDTALSPL AKSLS+EERGDALFKRAELKMSTNRRALVDSALADLTESVTLS+NAN+Y+WLGKCYEMKKLR EAKK+YEEALNIEPRLSN
Subjt:  QGFKTSALESLDTALSPLAAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYFWLGKCYEMKKLRGEAKKSYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

A0A5A7VBU3 TPR domain protein

2.3e-95

94.79

Show/hide

Query:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI
        MVTDILLQIALILVMVVMFLAMHNIPQR+FAKLRLRFR++VESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALD+
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLAAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYFWLGKCYEMKKLRGEAKKSYEEALNIEPRLSN
        QGFKTSALESLDTALSPL AKSLS+EERGDALFKRAELKMSTNRRALVDSALADLTESVTLS+NAN+Y+WLGKCYEMKKLR EAKK+YEEALNIEPRLSN
Subjt:  QGFKTSALESLDTALSPLAAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYFWLGKCYEMKKLRGEAKKSYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

A0A6J1GK03 uncharacterized protein LOC111454602

2.6e-94

94.31

Show/hide

Query:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI
        MV DILLQIALILVMVVMFLAMHNIPQRFFAKLR RFR+DVESKRHFVRGAQLLARARSAPSRSSATSLAE+VVAEA+KAIALDPKDAAAHILKALALDI
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLAAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYFWLGKCYEMKKLRGEAKKSYEEALNIEPRLSN
        QGFKTSALESLDTALSPLAAKSLSNEERGDAL+KRAELKMSTNRR +VDSALADLTESVTLS+NANAY WLGKCYEMKKLRGEAKK+YEEALNIEPRLS 
Subjt:  QGFKTSALESLDTALSPLAAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYFWLGKCYEMKKLRGEAKKSYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLSSS
Subjt:  AREALERLSSS

A0A6J1KRQ5 uncharacterized protein LOC111496615

3.4e-94

93.84

Show/hide

Query:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI
        MV DILLQIALILVMVVMFLAMHNIPQRFFAKLR RFR+DVESKRHFVRGAQLLARARSAPSRSSATSLAE+VVAEA+KAIALDPKDAAAHILKALALDI
Subjt:  MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLAAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYFWLGKCYEMKKLRGEAKKSYEEALNIEPRLSN
        QGFKTSALESLDTALSPLAAKSLSNEERGDAL+KRAELKMSTNRRA+VDSA+ADLTESVTLS+NANAY WLGKCYEMKKLRGEAKK+YEEALNIEPRLS 
Subjt:  QGFKTSALESLDTALSPLAAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYFWLGKCYEMKKLRGEAKKSYEEALNIEPRLSN

Query:  AREALERLSSS
        AREALERLS+S
Subjt:  AREALERLSSS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G65520.1 Tetratricopeptide repeat (TPR)-like superfamily protein

1.3e-34

43.78

Show/hide

Query:  TDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDIQG
        T+ ++Q A++++ +VMF A+  + QR   K R + RA ++++R  ++ ++LLARAR+ P +S + SLA+  + EA+  IA+ P DAA HI++ALALD+ G
Subjt:  TDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDIQG

Query:  FKTSALESLDTALSPLAAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSR---NANAYFWLGKCYEMKKLRGEAKKSYEEALNIEPRLS
          TSAL+S D AL+    KSLS  ER DAL KRAE+K++ NRR  +DSA+ DL E+V L+     A  +  LG+CYE K L+ +A+ ++ EAL  +P   
Subjt:  FKTSALESLDTALSPLAAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSR---NANAYFWLGKCYEMKKLRGEAKKSYEEALNIEPRLS

Query:  N
        N
Subjt:  N

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTCACCGACATACTTCTTCAAATTGCTCTCATCCTCGTAATGGTCGTCATGTTCCTTGCGATGCACAACATTCCACAGAGATTCTTTGCCAAGCTCCGATTACGTTT
TCGAGCCGATGTCGAATCCAAACGCCACTTCGTGAGAGGCGCTCAGCTTCTGGCTCGAGCGAGATCTGCGCCGTCGCGATCCTCGGCGACGTCGTTGGCGGAAGAAGTCG
TAGCAGAAGCCAATAAGGCCATCGCTCTCGATCCTAAGGATGCCGCTGCTCACATCCTCAAGGCTTTGGCTCTCGACATTCAAGGATTCAAGACCTCTGCTCTTGAATCG
CTCGATACGGCTCTGTCGCCGCTCGCCGCTAAGTCGCTCAGCAACGAGGAGCGAGGCGACGCGTTGTTCAAACGAGCTGAGTTGAAGATGTCCACGAATCGGCGAGCCCT
AGTTGACTCGGCTTTGGCTGACTTGACCGAGTCTGTGACGCTAAGTCGGAATGCGAATGCCTATTTTTGGTTGGGGAAATGCTATGAGATGAAGAAATTGAGAGGAGAAG
CCAAGAAATCGTATGAAGAAGCGTTGAACATCGAACCACGATTATCCAACGCTCGGGAGGCATTGGAACGCCTATCATCGTCGTAA

mRNA sequence

Show/hide mRNA sequence

CTCCACTCCTCCTTGCCTCGTTCGTAGCTGTAGAGGCGACAGCAAAATTAAAACCCAAAACGCCGCCTCAGCAGACCCGATTCCGATCTCCCCGAATTCCTAACTTCGTT
CAGATCCGATTCCGATTGTATTCGGAGTTCTTCCACTTCCCGGAATTGATCAAAAGCAGACTGAAAGAAATTACAGGAAGTTCAGAGATCGATAAAGATGGTCACCGACA
TACTTCTTCAAATTGCTCTCATCCTCGTAATGGTCGTCATGTTCCTTGCGATGCACAACATTCCACAGAGATTCTTTGCCAAGCTCCGATTACGTTTTCGAGCCGATGTC
GAATCCAAACGCCACTTCGTGAGAGGCGCTCAGCTTCTGGCTCGAGCGAGATCTGCGCCGTCGCGATCCTCGGCGACGTCGTTGGCGGAAGAAGTCGTAGCAGAAGCCAA
TAAGGCCATCGCTCTCGATCCTAAGGATGCCGCTGCTCACATCCTCAAGGCTTTGGCTCTCGACATTCAAGGATTCAAGACCTCTGCTCTTGAATCGCTCGATACGGCTC
TGTCGCCGCTCGCCGCTAAGTCGCTCAGCAACGAGGAGCGAGGCGACGCGTTGTTCAAACGAGCTGAGTTGAAGATGTCCACGAATCGGCGAGCCCTAGTTGACTCGGCT
TTGGCTGACTTGACCGAGTCTGTGACGCTAAGTCGGAATGCGAATGCCTATTTTTGGTTGGGGAAATGCTATGAGATGAAGAAATTGAGAGGAGAAGCCAAGAAATCGTA
TGAAGAAGCGTTGAACATCGAACCACGATTATCCAACGCTCGGGAGGCATTGGAACGCCTATCATCGTCGTAATCAAATCGATGTCTTCTGTGGTCTGTGTGAGGTCAAC
GCTGGAAGAACATCTCCCGATTTTGTCAGGTTTATCACTTCCATTCTCGTGGATTCCTGTTAACACTGATTGGCATCCCTTATCTATCTTATAATTGAGACGCGGAATTG
GCTTCTGAGATGAAATTCTAGCTGCAAATCATTTGCAAAGTAGAACAGATCTCCTCCCTTCTCTCAAACTTCAAACTGATAGTTTATAGTTCGGATTATGAACAAAAGCC
TTTGAATAGGATCTATATTTCCTGCGTTTCTTAGTTATAGGCGATCTTCAAATCTTCGTTTCCTTGTCTTGTATGCCATTTCTGTTGATTTTCCACAATTCTAGTTGTAA
TTTTTTGTAAAAGTTCAGATTAGAACAAACCCAAAAAGGAAATCAGCACGGCAAATGATCTTCAGGACGGTAATCTGATTCTTTCGTTCTCATTAGTCATTATTACAGAA
TTCCCACTTCATAAAATTGTTAAGAAGTCCTGTCTGAAGAAACATTTCTGGGTTCGAGTAGTTCGGACTGTTGTGAAAAGATAACATGAAGATTCATCATAGTCATCATG
CTCATGGATGTGAATTTCCCTTCGACAAAAGTTGCTTGTCTCTAATGATTTCTTCAATTCAAGCTTCTTGTTAAAAAGGCAATCTTCAGCGTCGGAGTAGCTGGAAAGAT
AACTAGGGGGCTGTTTGCAATCATTTGGGAAAATAGTTTTTTTTTTCCAAATTTATTTTTCAGTTAAATATAAAATTGATTAAATTACCCAGGTTAAAA

Protein sequence

Show/hide protein sequence

MVTDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDIQGFKTSALES
LDTALSPLAAKSLSNEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSRNANAYFWLGKCYEMKKLRGEAKKSYEEALNIEPRLSNAREALERLSSS

Tan0009975 (gene) of Snake gourd v1 genome