; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0010009 (gene) of Snake gourd v1 genome

Gene IDTan0010009
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCRM domain-containing protein
Genome locationLG02:7191677..7194437
RNA-Seq ExpressionTan0010009
SyntenyTan0010009
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001890 - RNA-binding, CRM domain
IPR035920 - YhbY-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588422.1 hypothetical protein SDJN03_16987, partial [Cucurbita argyrosperma subsp. sororia]1.8e-11383.68Show/hide
Query:  MGASIMSSHSHSHLIHSLLLRSVPSPLSTLFSKPSTAAAAISAACFRQFKPNSSIFLSRQSPPRSRSFTPSASVSFSRSFSSTIYDPSELGFDEEYDEIE
        MGASIMSS SHSHLIHSLLLRSVPS LST   +PS   A ISAAC  QFKPNSSIFL RQSP RSRSFTPSASVSFSRSFSSTI D S +GF+++ D I+
Subjt:  MGASIMSSHSHSHLIHSLLLRSVPSPLSTLFSKPSTAAAAISAACFRQFKPNSSIFLSRQSPPRSRSFTPSASVSFSRSFSSTIYDPSELGFDEEYDEIE

Query:  DEDESDYEDEVEIEDFELED-TVVDGSQTGVASELSSSVVNRSEVKNIPSLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKI
        D++ESDYEDEVEIEDFELED TV DG +T VAS+ SS+VV+ SEVKNIPSLT+KEKKELAS+AHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKI
Subjt:  DEDESDYEDEVEIEDFELED-TVVDGSQTGVASELSSSVVNRSEVKNIPSLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKI

Query:  KVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPSITKMKAEEQKRQARKIYVRKEPDRVKSILQNKIQTPKNSNRGRRGSSRF
        KVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPSI+KMKAEE+KR+ARK+YVRKEPDRVK  LQNK+QTP++SNRGRRGSSRF
Subjt:  KVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPSITKMKAEEQKRQARKIYVRKEPDRVKSILQNKIQTPKNSNRGRRGSSRF

XP_008448058.1 PREDICTED: uncharacterized protein LOC103490350 [Cucumis melo]6.3e-10677.7Show/hide
Query:  MGASIMSSHSHSHLIHSLLLRSVPSPLSTLFSKPSTAAAAISAACFRQFKPNSSIFLSRQSPPRSRSFTPSASVSFSRSFSSTIYDPSELGFDEEYDEIE
        M ASI+SSHSHSH  HSLLLRSVPS  ST FSKPS A AA S  CF QFKP+SS FL+R+SP  SR FTPS S+SFSR FSST+  PSE+ FDE  DEIE
Subjt:  MGASIMSSHSHSHLIHSLLLRSVPSPLSTLFSKPSTAAAAISAACFRQFKPNSSIFLSRQSPPRSRSFTPSASVSFSRSFSSTIYDPSELGFDEEYDEIE

Query:  DEDESDYEDEVEIEDFELEDTVVDGSQTGVASELSSSVVNRSEVKNIPSLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK
        D+DESDYEDEV     E+ED+V DG++ GVASELSS V+NR+EVKNIPSLTIKEKKELAS+AH LGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK
Subjt:  DEDESDYEDEVEIEDFELEDTVVDGSQTGVASELSSSVVNRSEVKNIPSLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK

Query:  VLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPSITKMKAEEQKRQARKIYVRKEPDRVKSILQNKIQTPKNSNRGRRGSSRF
        +LGNCP +LEDVVR+LEESTGSVVV++IGRTVIIYRPSITKMKAEE+KR++RKIY+RKEPDRVKSILQ K++TP++SNRGRRG+SR+
Subjt:  VLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPSITKMKAEEQKRQARKIYVRKEPDRVKSILQNKIQTPKNSNRGRRGSSRF

XP_022971306.1 uncharacterized protein LOC111470060 [Cucurbita maxima]4.1e-11383.68Show/hide
Query:  MGASIMSSHSHSHLIHSLLLRSVPSPLSTLFSKPSTAAAAISAACFRQFKPNSSIFLSRQSPPRSRSFTPSASVSFSRSFSSTIYDPSELGFDEEYDEIE
        MGASIMSS SHSHLIHSLLLRSVPS LST   +PS   A ISAAC  QFKPNSSIFL RQSP RSRSFTPSASVSFSRSFSS I   S +GF+++ D I+
Subjt:  MGASIMSSHSHSHLIHSLLLRSVPSPLSTLFSKPSTAAAAISAACFRQFKPNSSIFLSRQSPPRSRSFTPSASVSFSRSFSSTIYDPSELGFDEEYDEIE

Query:  DEDESDYEDEVEIEDFELED-TVVDGSQTGVASELSSSVVNRSEVKNIPSLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKI
        D+DESDYEDEVEIEDFELED TV DG +T VAS+ SS+VV+RSEVK+IPSLT+KEKKELAS+AHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKI
Subjt:  DEDESDYEDEVEIEDFELED-TVVDGSQTGVASELSSSVVNRSEVKNIPSLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKI

Query:  KVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPSITKMKAEEQKRQARKIYVRKEPDRVKSILQNKIQTPKNSNRGRRGSSRF
        KVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPSI+KMKAEE+KR+ARKIYVRKEPDRVK  LQNK+QTP++SNRGRRGSSRF
Subjt:  KVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPSITKMKAEEQKRQARKIYVRKEPDRVKSILQNKIQTPKNSNRGRRGSSRF

XP_023529380.1 uncharacterized protein LOC111792256 [Cucurbita pepo subsp. pepo]4.1e-11382.65Show/hide
Query:  MGASIMSSHSHSHLIHSLLLRSVPSPLSTLFSKPSTAAAAISAACFRQFKPNSSIFLSRQSPPRSRSFTPSASVSFSRSFSSTIYDPSELGFDEEYDEIE
        MGASIMSS SHSHLIHSLLLRSVPS LST  S+PS   AAISAAC  QFKPNSSIFL RQSP RSRSF+PSASVSFSRSFSSTI D S +GF+++ D I+
Subjt:  MGASIMSSHSHSHLIHSLLLRSVPSPLSTLFSKPSTAAAAISAACFRQFKPNSSIFLSRQSPPRSRSFTPSASVSFSRSFSSTIYDPSELGFDEEYDEIE

Query:  DEDESDY------EDEVEIEDFELED-TVVDGSQTGVASELSSSVVNRSEVKNIPSLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEA
        D+DESDY      EDEVEIEDFELED TV DG +T VAS+ SS+VV+RSEVKNIPSLT+KEKKELAS+AHSLGKKLKSQLVGKSGVTPGLATSFIETLEA
Subjt:  DEDESDY------EDEVEIEDFELED-TVVDGSQTGVASELSSSVVNRSEVKNIPSLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEA

Query:  NELLKIKVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPSITKMKAEEQKRQARKIYVRKEPDRVKSILQNKIQTPKNSNRGRRGSSRF
        NELLKIKVLGNCPGELEDVV+QLEESTGSVVVSKIGRTVIIYRPSI+KMKAEE+KR+ARK+YVRKEPDRVK  LQNK+QTP++SNRGRRGSSRF
Subjt:  NELLKIKVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPSITKMKAEEQKRQARKIYVRKEPDRVKSILQNKIQTPKNSNRGRRGSSRF

XP_038888218.1 uncharacterized protein LOC120078082 [Benincasa hispida]5.3e-10579.79Show/hide
Query:  MGASIMSSHSHSHLIHSLLLRSVPSPLSTLFSKPSTAAAAISAACFRQFKPNSSIFLSRQSPPRSRSFTPSASVSFSRSFSSTIYDPSELGFDEEYDEIE
        MGASI+S HS     HSLLLRSVPS  ST FSKPS AAAA +A CF QFKP SS F +R+S   SRSF PS S+SF RSF+STI  PSE  FDE+ DEIE
Subjt:  MGASIMSSHSHSHLIHSLLLRSVPSPLSTLFSKPSTAAAAISAACFRQFKPNSSIFLSRQSPPRSRSFTPSASVSFSRSFSSTIYDPSELGFDEEYDEIE

Query:  DEDESDYEDEVEIEDFELEDTVVDGSQTGVASELSSSVVNRSEVKNIPSLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK
        DEDESDYEDEVEI   E E+ V DG +TGVASELSS +VNR+EVKNIPSLTIKEKKELAS+AHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK
Subjt:  DEDESDYEDEVEIEDFELEDTVVDGSQTGVASELSSSVVNRSEVKNIPSLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK

Query:  VLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPSITKMKAEEQKRQARKIYVRKEPDRVKSILQNKIQTPKNSNRGRRGSSRF
        +LGNCP ELED VR+LEESTGSVVV++IGRTVIIYRPSITKMKAE+QKRQARKIYVRKE DRVKSILQNKIQTP++SNRGRRGSSR+
Subjt:  VLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPSITKMKAEEQKRQARKIYVRKEPDRVKSILQNKIQTPKNSNRGRRGSSRF

TrEMBL top hitse value%identityAlignment
A0A0A0K2C3 CRM domain-containing protein1.3e-10477.97Show/hide
Query:  MGASIMSSHSHSHLIHSLLLRSVPSPLSTLFSKPSTAAAAISAACFRQFKPNSSIFLSRQSPPRSRSFTPSASVSFSRSFSSTIYDPSELGFDEEYDEIE
        MGASI+SSHS     HSLLLRS+PS  ST FSKPS AAAAIS  CF QFKP+SS  L+R+SP   R FTPSA +SFSRSFSSTI DPSE+ FDE  DEIE
Subjt:  MGASIMSSHSHSHLIHSLLLRSVPSPLSTLFSKPSTAAAAISAACFRQFKPNSSIFLSRQSPPRSRSFTPSASVSFSRSFSSTIYDPSELGFDEEYDEIE

Query:  DEDESDYEDEVEIEDFELEDTVVDGSQTGVASELSSSVVNRSEVKNIPSLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK
        D+DESDYEDEV     E+ED V DG++TGVASELSS +++R+EVKNIPSLTIKEKKELAS+AH LGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK
Subjt:  DEDESDYEDEVEIEDFELEDTVVDGSQTGVASELSSSVVNRSEVKNIPSLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK

Query:  VLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPSITKMKAEEQKRQARKIYVRKEPDRVKSILQNKIQTPKNSNRGRRGSSR
        +LGNCP ELEDVVR+L ESTGSVVV++IGRTVIIYRPSITKMKAEE+KR+ARK+Y+RKEPDRVKSILQ KI+TP++SNRGRRG+SR
Subjt:  VLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPSITKMKAEEQKRQARKIYVRKEPDRVKSILQNKIQTPKNSNRGRRGSSR

A0A1S3BJF7 uncharacterized protein LOC1034903503.0e-10677.7Show/hide
Query:  MGASIMSSHSHSHLIHSLLLRSVPSPLSTLFSKPSTAAAAISAACFRQFKPNSSIFLSRQSPPRSRSFTPSASVSFSRSFSSTIYDPSELGFDEEYDEIE
        M ASI+SSHSHSH  HSLLLRSVPS  ST FSKPS A AA S  CF QFKP+SS FL+R+SP  SR FTPS S+SFSR FSST+  PSE+ FDE  DEIE
Subjt:  MGASIMSSHSHSHLIHSLLLRSVPSPLSTLFSKPSTAAAAISAACFRQFKPNSSIFLSRQSPPRSRSFTPSASVSFSRSFSSTIYDPSELGFDEEYDEIE

Query:  DEDESDYEDEVEIEDFELEDTVVDGSQTGVASELSSSVVNRSEVKNIPSLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK
        D+DESDYEDEV     E+ED+V DG++ GVASELSS V+NR+EVKNIPSLTIKEKKELAS+AH LGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK
Subjt:  DEDESDYEDEVEIEDFELEDTVVDGSQTGVASELSSSVVNRSEVKNIPSLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK

Query:  VLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPSITKMKAEEQKRQARKIYVRKEPDRVKSILQNKIQTPKNSNRGRRGSSRF
        +LGNCP +LEDVVR+LEESTGSVVV++IGRTVIIYRPSITKMKAEE+KR++RKIY+RKEPDRVKSILQ K++TP++SNRGRRG+SR+
Subjt:  VLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPSITKMKAEEQKRQARKIYVRKEPDRVKSILQNKIQTPKNSNRGRRGSSRF

A0A6J1C409 uncharacterized protein LOC1110077232.7e-7081.82Show/hide
Query:  ESDYEDEVEIEDFELEDTVVDG-SQTGVASELSSSVVNRSEVKNIPSLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVL
        +SDYE EV I DFELE+  + G SQ    S+LSSSVVN SEVKN+PSLT+KEKKELAS+AHSLGKKLK+QLVGKSGVTPGLA SF+ETLEANELLKIK+L
Subjt:  ESDYEDEVEIEDFELEDTVVDG-SQTGVASELSSSVVNRSEVKNIPSLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVL

Query:  GNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPSITKMKAEEQKRQARKIYVRKEPDRVKSILQNKIQTP--KNSNRGRRGSSRF
         NCP EL+D VRQLEESTGSVVVS+IGRTVIIYRPSI+KMKAEE+KRQARKIYVRKEPDRVKSILQNK+QTP   NSNRGRRGSSRF
Subjt:  GNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPSITKMKAEEQKRQARKIYVRKEPDRVKSILQNKIQTP--KNSNRGRRGSSRF

A0A6J1EIK7 uncharacterized protein LOC1114347255.1e-6981.91Show/hide
Query:  MGASIMSSHSHSHLIHSLLLRSVPSPLSTLFSKPSTAAAAISAACFRQFKPNSSIFLSRQSPPRSRSFTPSASVSFSRSFSSTIYDPSELGFDEEYDEIE
        MGASIMSS SHSHLIHSLLLRSVPS LST  SKPS   AAISAAC  QFKPNSSIFL RQSP RSRSF+PSASVSFSRSFSSTI D S +GF+++ D I+
Subjt:  MGASIMSSHSHSHLIHSLLLRSVPSPLSTLFSKPSTAAAAISAACFRQFKPNSSIFLSRQSPPRSRSFTPSASVSFSRSFSSTIYDPSELGFDEEYDEIE

Query:  DEDESDYEDEVEIEDFELED-TVVDGSQTGVASELSSSVVNRSEVKNIPSLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLK
        D+DESDY DEVEIEDFELED TV DG +T VAS+ S +VV+RSEVKNIPSLT+KEKKELAS+AHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLK
Subjt:  DEDESDYEDEVEIEDFELED-TVVDGSQTGVASELSSSVVNRSEVKNIPSLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLK

A0A6J1I2Z3 uncharacterized protein LOC1114700602.0e-11383.68Show/hide
Query:  MGASIMSSHSHSHLIHSLLLRSVPSPLSTLFSKPSTAAAAISAACFRQFKPNSSIFLSRQSPPRSRSFTPSASVSFSRSFSSTIYDPSELGFDEEYDEIE
        MGASIMSS SHSHLIHSLLLRSVPS LST   +PS   A ISAAC  QFKPNSSIFL RQSP RSRSFTPSASVSFSRSFSS I   S +GF+++ D I+
Subjt:  MGASIMSSHSHSHLIHSLLLRSVPSPLSTLFSKPSTAAAAISAACFRQFKPNSSIFLSRQSPPRSRSFTPSASVSFSRSFSSTIYDPSELGFDEEYDEIE

Query:  DEDESDYEDEVEIEDFELED-TVVDGSQTGVASELSSSVVNRSEVKNIPSLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKI
        D+DESDYEDEVEIEDFELED TV DG +T VAS+ SS+VV+RSEVK+IPSLT+KEKKELAS+AHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKI
Subjt:  DEDESDYEDEVEIEDFELED-TVVDGSQTGVASELSSSVVNRSEVKNIPSLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKI

Query:  KVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPSITKMKAEEQKRQARKIYVRKEPDRVKSILQNKIQTPKNSNRGRRGSSRF
        KVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPSI+KMKAEE+KR+ARKIYVRKEPDRVK  LQNK+QTP++SNRGRRGSSRF
Subjt:  KVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPSITKMKAEEQKRQARKIYVRKEPDRVKSILQNKIQTPKNSNRGRRGSSRF

SwissProt top hitse value%identityAlignment
P0AGK4 RNA-binding protein YhbY2.9e-0531.11Show/hide
Query:  SLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPS
        +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+K+          +V  +   TG+  V  IG+T+++YRP+
Subjt:  SLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPS

P0AGK5 RNA-binding protein YhbY2.9e-0531.11Show/hide
Query:  SLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPS
        +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+K+          +V  +   TG+  V  IG+T+++YRP+
Subjt:  SLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPS

P0AGK6 RNA-binding protein YhbY2.9e-0531.11Show/hide
Query:  SLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPS
        +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+K+          +V  +   TG+  V  IG+T+++YRP+
Subjt:  SLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPS

P54454 Probable RNA-binding protein YqeI4.8e-0839.33Show/hide
Query:  LTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPS
        LT K+K+ L S AH L    +   VGK GV   +     E LEA EL+K+ VL NC  +  DV   L + + S +V  IG T+++Y+ S
Subjt:  LTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPS

Q8L7C2 CRM-domain containing factor CFM2, chloroplastic4.2e-0432.46Show/hide
Query:  GSQTGVASELSSSVVNRSEVKN-IPSLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPG-ELEDVVRQLEESTGS
        GS TG  S++S+    +SE    +  L+ +E+  L   A  + KK     VG+S V  GLA +     + N L  + V G   G  +++V+ +L+E TG+
Subjt:  GSQTGVASELSSSVVNRSEVKN-IPSLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPG-ELEDVVRQLEESTGS

Query:  VVVSKIGRTVIIYR
        ++VS+    VI+YR
Subjt:  VVVSKIGRTVIIYR

Arabidopsis top hitse value%identityAlignment
AT2G21350.1 RNA-binding CRS1 / YhbY (CRM) domain protein2.3e-2941.56Show/hide
Query:  SHSHSHLIHSLLLRSVPSPLSTLFSKPSTAAAAISAACFRQFKPNSSIFLSRQSPPRSRSFTPSASVSFSRSFSSTIYDPSELGFDEEYDEIEDEDESDY
        S + ++LIH LL    P+    LF +P +      +   R+   ++ I  S   P    SF+P   +   +SFSS                  DE E D 
Subjt:  SHSHSHLIHSLLLRSVPSPLSTLFSKPSTAAAAISAACFRQFKPNSSIFLSRQSPPRSRSFTPSASVSFSRSFSSTIYDPSELGFDEEYDEIEDEDESDY

Query:  EDEVEIEDFELEDTVVDGSQTGVASELSSSVVNRSEVKNIPSLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPG
        ED V +    L +   DG + G  SEL+   +  +   +   L+ KEK++LAS+AH LG KLKSQLVGKSGVT  +  SF+ETLE NELLK+K+   CPG
Subjt:  EDEVEIEDFELEDTVVDGSQTGVASELSSSVVNRSEVKNIPSLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPG

Query:  ELEDVVRQLEESTGSVVVSKIGRTVIIYRPSITKMKAEEQKRQ
        ELED++ +LEE+TGSV V +I RTVI+YRPS TK+KA+E K++
Subjt:  ELEDVVRQLEESTGSVVVSKIGRTVIIYRPSITKMKAEEQKRQ

AT3G01370.1 CRM family member 23.0e-0532.46Show/hide
Query:  GSQTGVASELSSSVVNRSEVKN-IPSLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPG-ELEDVVRQLEESTGS
        GS TG  S++S+    +SE    +  L+ +E+  L   A  + KK     VG+S V  GLA +     + N L  + V G   G  +++V+ +L+E TG+
Subjt:  GSQTGVASELSSSVVNRSEVKN-IPSLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPG-ELEDVVRQLEESTGS

Query:  VVVSKIGRTVIIYR
        ++VS+    VI+YR
Subjt:  VVVSKIGRTVIIYR

AT4G39040.1 RNA-binding CRS1 / YhbY (CRM) domain protein8.6e-3740.83Show/hide
Query:  SSHSHSHLIHSLLLRSVPSPLSTLFSKPSTAAAAISAACFRQFKPNSSIFLSRQSPPRSRSFTPSASVSFSRSFSSTIYDPSELGFDEEYDEIEDEDESD
        +S S +HLIH+LL    P     LF +P   +A++S +  R  KP    F S+  P  S S    +  S          +  +  F  E  E EDE+E D
Subjt:  SSHSHSHLIHSLLLRSVPSPLSTLFSKPSTAAAAISAACFRQFKPNSSIFLSRQSPPRSRSFTPSASVSFSRSFSSTIYDPSELGFDEEYDEIEDEDESD

Query:  YED------EVEIEDFELEDTVVDGSQTGVASELSSSVVNRSEVKNIPSLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK
         +D      E  IED E  + V   S+ G   E + +   +    +   L+IKEKKELAS+AHSLG KLK QLVGKSGVT  +  SF+ETLE NELLK+K
Subjt:  YED------EVEIEDFELEDTVVDGSQTGVASELSSSVVNRSEVKNIPSLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK

Query:  VLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPSITKMKAEEQKRQARKIYVRKEPDRVKSILQNKIQ---TPKNSNRGRRGSSR
        +    P ELED V+ LEE+TGSV V +IGRTVI+YRPS TKMKAE +K++  ++ + +      +      +   + +   RGRRG SR
Subjt:  VLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPSITKMKAEEQKRQARKIYVRKEPDRVKSILQNKIQ---TPKNSNRGRRGSSR

AT4G39040.2 RNA-binding CRS1 / YhbY (CRM) domain protein1.9e-3643.02Show/hide
Query:  SSHSHSHLIHSLLLRSVPSPLSTLFSKPSTAAAAISAACFRQFKPNSSIFLSRQSPPRSRSFTPSASVSFSRSFSSTIYDPSELGFDEEYDEIEDEDESD
        +S S +HLIH+LL    P     LF +P   +A++S +  R  KP    F S+  P  S S    +  S          +  +  F  E  E EDE+E D
Subjt:  SSHSHSHLIHSLLLRSVPSPLSTLFSKPSTAAAAISAACFRQFKPNSSIFLSRQSPPRSRSFTPSASVSFSRSFSSTIYDPSELGFDEEYDEIEDEDESD

Query:  YED------EVEIEDFELEDTVVDGSQTGVASELSSSVVNRSEVKNIPSLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK
         +D      E  IED E  + V   S+ G   E + +   +    +   L+IKEKKELAS+AHSLG KLK QLVGKSGVT  +  SF+ETLE NELLK+K
Subjt:  YED------EVEIEDFELEDTVVDGSQTGVASELSSSVVNRSEVKNIPSLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK

Query:  VLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPSITKMKAEEQKRQARKIYVRK
        +    P ELED V+ LEE+TGSV V +IGRTVI+YRPS TKMKAE +K++  ++ + +
Subjt:  VLGNCPGELEDVVRQLEESTGSVVVSKIGRTVIIYRPSITKMKAEEQKRQARKIYVRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCTTCGATAATGTCCTCTCACTCTCATTCTCACCTGATCCACTCTCTTCTTCTCCGGTCAGTCCCCTCTCCTCTCTCCACTCTCTTCTCCAAACCCTCCACCGC
CGCCGCCGCCATCTCCGCCGCTTGCTTCCGTCAATTTAAACCCAACAGTTCAATCTTCCTAAGTCGCCAATCTCCTCCCCGTTCCCGGTCTTTCACTCCCTCGGCATCCG
TTTCCTTTTCTCGCTCCTTTTCCTCCACCATTTACGATCCCTCTGAGCTCGGATTTGATGAAGAATACGATGAAATTGAAGATGAGGACGAAAGTGATTACGAAGATGAA
GTTGAAATCGAAGATTTCGAACTGGAAGACACCGTTGTGGACGGTTCGCAAACTGGTGTGGCTTCGGAGTTGTCTTCGTCGGTGGTGAATAGAAGTGAAGTGAAGAATAT
TCCGAGCTTGACGATTAAGGAGAAGAAAGAGTTGGCTTCGTTCGCTCATAGCTTGGGGAAGAAGCTGAAGAGTCAGTTGGTGGGAAAGTCTGGCGTGACTCCTGGCTTGG
CTACTTCTTTCATTGAGACACTTGAAGCCAACGAGCTTCTCAAGATCAAAGTTCTGGGGAACTGTCCAGGGGAGCTGGAGGATGTGGTGAGGCAACTGGAGGAATCGACT
GGCTCTGTGGTGGTTAGCAAAATTGGCAGAACTGTTATTATTTATAGGCCCAGCATCACAAAAATGAAAGCCGAGGAACAAAAACGACAAGCCCGAAAAATTTATGTGAG
AAAGGAACCTGATCGAGTGAAATCCATTTTGCAGAATAAAATACAAACACCCAAGAACTCAAACCGTGGTCGTCGTGGAAGCAGCAGGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATTTCACTCCTCAGTTTCAGGCGCGACGAACAAGAAGGAAGCAAAAATGGGAGCTTCGATAATGTCCTCTCACTCTCATTCTCACCTGATCCACTCTCTTCTTCTCCGGT
CAGTCCCCTCTCCTCTCTCCACTCTCTTCTCCAAACCCTCCACCGCCGCCGCCGCCATCTCCGCCGCTTGCTTCCGTCAATTTAAACCCAACAGTTCAATCTTCCTAAGT
CGCCAATCTCCTCCCCGTTCCCGGTCTTTCACTCCCTCGGCATCCGTTTCCTTTTCTCGCTCCTTTTCCTCCACCATTTACGATCCCTCTGAGCTCGGATTTGATGAAGA
ATACGATGAAATTGAAGATGAGGACGAAAGTGATTACGAAGATGAAGTTGAAATCGAAGATTTCGAACTGGAAGACACCGTTGTGGACGGTTCGCAAACTGGTGTGGCTT
CGGAGTTGTCTTCGTCGGTGGTGAATAGAAGTGAAGTGAAGAATATTCCGAGCTTGACGATTAAGGAGAAGAAAGAGTTGGCTTCGTTCGCTCATAGCTTGGGGAAGAAG
CTGAAGAGTCAGTTGGTGGGAAAGTCTGGCGTGACTCCTGGCTTGGCTACTTCTTTCATTGAGACACTTGAAGCCAACGAGCTTCTCAAGATCAAAGTTCTGGGGAACTG
TCCAGGGGAGCTGGAGGATGTGGTGAGGCAACTGGAGGAATCGACTGGCTCTGTGGTGGTTAGCAAAATTGGCAGAACTGTTATTATTTATAGGCCCAGCATCACAAAAA
TGAAAGCCGAGGAACAAAAACGACAAGCCCGAAAAATTTATGTGAGAAAGGAACCTGATCGAGTGAAATCCATTTTGCAGAATAAAATACAAACACCCAAGAACTCAAAC
CGTGGTCGTCGTGGAAGCAGCAGGTTTTGATCTGAAGTAGGATTCATATCTAGCAAGCTCATTGTGGAGGGAAAGATTTTGAATTCCAACCCCATGTAAGTTATGACCTC
CTTGGGCAAGTTAATCCCTTGGGGAACTTTCTTTCTCCTTTACATACCATTCTAAATCTTGTAGATCCACTAGTTTTCATTTAATTCATTAATATAGAGACTTTACTCTG
CTCCGACTTCACGGATTTAAACAAGATTATAGTGTGTGTGTGAGAGTTAGTAGGAGAAACCAAACCAATTAACATAGAACATTAG
Protein sequenceShow/hide protein sequence
MGASIMSSHSHSHLIHSLLLRSVPSPLSTLFSKPSTAAAAISAACFRQFKPNSSIFLSRQSPPRSRSFTPSASVSFSRSFSSTIYDPSELGFDEEYDEIEDEDESDYEDE
VEIEDFELEDTVVDGSQTGVASELSSSVVNRSEVKNIPSLTIKEKKELASFAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEEST
GSVVVSKIGRTVIIYRPSITKMKAEEQKRQARKIYVRKEPDRVKSILQNKIQTPKNSNRGRRGSSRF