CuGenDBv2

Gene ID	Tan0010064
Organism	Trichosanthes anguina (Snake gourd v1)
Description	kinetochore protein SPC24 homolog
Genome location	LG03:63585352..63585760
RNA-Seq Expression	Tan0010064
Synteny	Tan0010064
Gene Ontology terms	GO:0051983 - regulation of chromosome segregation (biological process)
InterPro domains	IPR044951 - Kinetochore protein SPC24-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022144074.1 uncharacterized protein LOC111013852 isoform X1 [Momordica charantia]

9.7e-44

90.65

Show/hide

Query:  MGDFSGKMNIEELLSYGDDLVAFLKDQKDVQTLNQCLEHVKALQSSCDDDFSNVHSSVQDYKKKIEACRQKSEEAKARTVADDEMDILEKELEEELRKEN
        MGDFSGK+NIEELLSYG+DLVA LKDQKDVQTLNQCLEHVKALQS CDDDFSNVHSSVQDY+KKIEACRQK+EEAKARTVAD EMD+LE+ELEEELRKE+
Subjt:  MGDFSGKMNIEELLSYGDDLVAFLKDQKDVQTLNQCLEHVKALQSSCDDDFSNVHSSVQDYKKKIEACRQKSEEAKARTVADDEMDILEKELEEELRKEN

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

XP_022144075.1 uncharacterized protein LOC111013852 isoform X2 [Momordica charantia]

1.4e-39

85.98

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Query:  MGDFSGKMNIEELLSYGDDLVAFLKDQKDVQTLNQCLEHVKALQSSCDDDFSNVHSSVQDYKKKIEACRQKSEEAKARTVADDEMDILEKELEEELRKEN
        MGDFSGK+NIEELLSYG+DLVA LKDQKDVQTLNQCLEHVKALQS CDDDFSNVH    +Y+KKIEACRQK+EEAKARTVAD EMD+LE+ELEEELRKE+
Subjt:  MGDFSGKMNIEELLSYGDDLVAFLKDQKDVQTLNQCLEHVKALQSSCDDDFSNVHSSVQDYKKKIEACRQKSEEAKARTVADDEMDILEKELEEELRKEN

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

XP_022931907.1 uncharacterized protein LOC111438184 [Cucurbita moschata]

1.2e-38

83.18

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Query:  MGDFSGKMNIEELLSYGDDLVAFLKDQKDVQTLNQCLEHVKALQSSCDDDFSNVHSSVQDYKKKIEACRQKSEEAKARTVADDEMDILEKELEEELRKEN
        MGDFSGKMNIE+LLSYGDDLVA LKDQ DVQTLNQCL+H  ALQSS  DD  NVHSSVQDY+KKIE CR K+EEAKARTVADDEMDILEKE+EEE+R+E+
Subjt:  MGDFSGKMNIEELLSYGDDLVAFLKDQKDVQTLNQCLEHVKALQSSCDDDFSNVHSSVQDYKKKIEACRQKSEEAKARTVADDEMDILEKELEEELRKEN

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

XP_022966574.1 uncharacterized protein LOC111466216 [Cucurbita maxima]

2.7e-38

84.11

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Query:  MGDFSGKMNIEELLSYGDDLVAFLKDQKDVQTLNQCLEHVKALQSSCDDDFSNVHSSVQDYKKKIEACRQKSEEAKARTVADDEMDILEKELEEELRKEN
        MGDFSGKMNIEELLSYG+DLV  LKDQ DVQTLNQCL+H  ALQSSC DDFSNVH  VQDY+KKIE CR K+EEAKARTVADDEMDILEKE+EEELR+E+
Subjt:  MGDFSGKMNIEELLSYGDDLVAFLKDQKDVQTLNQCLEHVKALQSSCDDDFSNVHSSVQDYKKKIEACRQKSEEAKARTVADDEMDILEKELEEELRKEN

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

XP_023518318.1 uncharacterized protein LOC111781837 [Cucurbita pepo subsp. pepo]

7.2e-39

83.18

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Query:  MGDFSGKMNIEELLSYGDDLVAFLKDQKDVQTLNQCLEHVKALQSSCDDDFSNVHSSVQDYKKKIEACRQKSEEAKARTVADDEMDILEKELEEELRKEN
        MGDFSGKMNIE+LLSYGDDLVA LKDQ DVQTLNQCL+   ALQSSC DD  NVHSSVQDY+KKIE CR K+EEAKARTVADDEMDILEKE+EEE+R+E+
Subjt:  MGDFSGKMNIEELLSYGDDLVAFLKDQKDVQTLNQCLEHVKALQSSCDDDFSNVHSSVQDYKKKIEACRQKSEEAKARTVADDEMDILEKELEEELRKEN

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CQL9 uncharacterized protein LOC111013852 isoform X2

7.0e-40

85.98

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Query:  MGDFSGKMNIEELLSYGDDLVAFLKDQKDVQTLNQCLEHVKALQSSCDDDFSNVHSSVQDYKKKIEACRQKSEEAKARTVADDEMDILEKELEEELRKEN
        MGDFSGK+NIEELLSYG+DLVA LKDQKDVQTLNQCLEHVKALQS CDDDFSNVH    +Y+KKIEACRQK+EEAKARTVAD EMD+LE+ELEEELRKE+
Subjt:  MGDFSGKMNIEELLSYGDDLVAFLKDQKDVQTLNQCLEHVKALQSSCDDDFSNVHSSVQDYKKKIEACRQKSEEAKARTVADDEMDILEKELEEELRKEN

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

A0A6J1CR83 uncharacterized protein LOC111013852 isoform X1

4.7e-44

90.65

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Query:  MGDFSGKMNIEELLSYGDDLVAFLKDQKDVQTLNQCLEHVKALQSSCDDDFSNVHSSVQDYKKKIEACRQKSEEAKARTVADDEMDILEKELEEELRKEN
        MGDFSGK+NIEELLSYG+DLVA LKDQKDVQTLNQCLEHVKALQS CDDDFSNVHSSVQDY+KKIEACRQK+EEAKARTVAD EMD+LE+ELEEELRKE+
Subjt:  MGDFSGKMNIEELLSYGDDLVAFLKDQKDVQTLNQCLEHVKALQSSCDDDFSNVHSSVQDYKKKIEACRQKSEEAKARTVADDEMDILEKELEEELRKEN

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

A0A6J1F034 uncharacterized protein LOC111438184

5.9e-39

83.18

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Query:  MGDFSGKMNIEELLSYGDDLVAFLKDQKDVQTLNQCLEHVKALQSSCDDDFSNVHSSVQDYKKKIEACRQKSEEAKARTVADDEMDILEKELEEELRKEN
        MGDFSGKMNIE+LLSYGDDLVA LKDQ DVQTLNQCL+H  ALQSS  DD  NVHSSVQDY+KKIE CR K+EEAKARTVADDEMDILEKE+EEE+R+E+
Subjt:  MGDFSGKMNIEELLSYGDDLVAFLKDQKDVQTLNQCLEHVKALQSSCDDDFSNVHSSVQDYKKKIEACRQKSEEAKARTVADDEMDILEKELEEELRKEN

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

A0A6J1HU69 uncharacterized protein LOC111466216

1.3e-38

84.11

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Query:  MGDFSGKMNIEELLSYGDDLVAFLKDQKDVQTLNQCLEHVKALQSSCDDDFSNVHSSVQDYKKKIEACRQKSEEAKARTVADDEMDILEKELEEELRKEN
        MGDFSGKMNIEELLSYG+DLV  LKDQ DVQTLNQCL+H  ALQSSC DDFSNVH  VQDY+KKIE CR K+EEAKARTVADDEMDILEKE+EEELR+E+
Subjt:  MGDFSGKMNIEELLSYGDDLVAFLKDQKDVQTLNQCLEHVKALQSSCDDDFSNVHSSVQDYKKKIEACRQKSEEAKARTVADDEMDILEKELEEELRKEN

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

A0A6J1IPN8 uncharacterized protein LOC111478320

2.9e-38

83.18

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Query:  MGDFSGKMNIEELLSYGDDLVAFLKDQKDVQTLNQCLEHVKALQSSCDDDFSNVHSSVQDYKKKIEACRQKSEEAKARTVADDEMDILEKELEEELRKEN
        M DF+GK NIEE+LSYGDDLVA L DQ DVQTLNQCLEH K LQSSC DDFSNV SSVQDY+KKIEACRQK+EEAKA TVADDE+DILEKEL EEL K N
Subjt:  MGDFSGKMNIEELLSYGDDLVAFLKDQKDVQTLNQCLEHVKALQSSCDDDFSNVHSSVQDYKKKIEACRQKSEEAKARTVADDEMDILEKELEEELRKEN

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

SwissProt top hits

e value

%identity

Alignment

Q67XT3 Kinetochore protein SPC24 homolog

4.0e-16

41.12

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Query:  MGDFSGKMNIEELLSYGDDLVAFLKDQKDVQTLNQCLEHVKALQSSCDDDFSNVHSSVQDYKKKIEACRQKSEEAKARTVADDEMDILEKELEEELRKEN
        MG+ S   +IE+L+SYGDDL+  L  +     ++Q  E  KAL  +C +DF+ +  S++D K K+ AC++K+EEA +   A+DE++ L+KEL+EE+ +E 
Subjt:  MGDFSGKMNIEELLSYGDDLVAFLKDQKDVQTLNQCLEHVKALQSSCDDDFSNVHSSVQDYKKKIEACRQKSEEAKARTVADDEMDILEKELEEELRKEN

Query:  LLMEEIR
         L +E+R
Subjt:  LLMEEIR

Arabidopsis top hits

e value

%identity

Alignment

AT3G08880.1 unknown protein

2.8e-17

41.12

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Query:  MGDFSGKMNIEELLSYGDDLVAFLKDQKDVQTLNQCLEHVKALQSSCDDDFSNVHSSVQDYKKKIEACRQKSEEAKARTVADDEMDILEKELEEELRKEN
        MG+ S   +IE+L+SYGDDL+  L  +     ++Q  E  KAL  +C +DF+ +  S++D K K+ AC++K+EEA +   A+DE++ L+KEL+EE+ +E 
Subjt:  MGDFSGKMNIEELLSYGDDLVAFLKDQKDVQTLNQCLEHVKALQSSCDDDFSNVHSSVQDYKKKIEACRQKSEEAKARTVADDEMDILEKELEEELRKEN

Query:  LLMEEIR
         L +E+R
Subjt:  LLMEEIR

AT5G01570.1 unknown protein

2.8e-17

42.42

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Query:  NIEELLSYGDDLVAFLKDQKDVQTLNQCLEHVKALQSSCDDDFSNVHSSVQDYKKKIEACRQKSEEAKARTVADDEMDILEKELEEELRKENLLMEEIR
        N E ++S+GD+L+  L D+K    L Q LE ++A+  SCD+DF  +H S+QD +KK++ C++K++EA +    ++E++ L+KEL+EEL  E  L EE+R
Subjt:  NIEELLSYGDDLVAFLKDQKDVQTLNQCLEHVKALQSSCDDDFSNVHSSVQDYKKKIEACRQKSEEAKARTVADDEMDILEKELEEELRKENLLMEEIR

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGAGATTTCTCCGGAAAGATGAACATCGAGGAGCTCTTGTCTTATGGCGACGATCTAGTGGCTTTCTTGAAGGACCAAAAGGACGTTCAAACCTTGAATCAATGTCT
CGAACATGTCAAGGCCCTTCAATCTTCTTGTGACGATGATTTTAGTAATGTTCACAGTTCAGTTCAAGATTATAAGAAGAAGATTGAGGCATGCCGGCAGAAATCTGAGG
AGGCGAAAGCGAGAACTGTTGCAGATGATGAAATGGATATTCTCGAAAAGGAGCTGGAAGAGGAACTTCGGAAAGAGAATTTGCTCATGGAGGAGATTAGATGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MGDFSGKMNIEELLSYGDDLVAFLKDQKDVQTLNQCLEHVKALQSSCDDDFSNVHSSVQDYKKKIEACRQKSEEAKARTVADDEMDILEKELEEELRKENLLMEEIR

Tan0010064 (gene) of Snake gourd v1 genome