CuGenDBv2

Gene ID	Tan0010066
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Unknown protein
Genome location	LG11:55904496..55936248
RNA-Seq Expression	Tan0010066
Synteny	Tan0010066
Gene Ontology terms	NA
InterPro domains	IPR039495 - TATA box-binding protein-associated factor RNA polymerase I subunit A-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6600392.1 hypothetical protein SDJN03_05625, partial [Cucurbita argyrosperma subsp. sororia]

2.8e-44

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Query:  LLLVGGRVDKALNQMENICRDANATL-------LKEHFDRSNDVLLSTCYEQILKKDPTCCHSLLKLVHMHKNTVCNYSLEYLMEMIALHLDGTCVECDT
        LLL+GGRVDKAL++MENICRD+NATL       L EHFD SN +LLSTCYE+ILKKDPTCCHSL KLVHMH+N   NYSLE L+EMIALHLDGTC E DT
Subjt:  LLLVGGRVDKALNQMENICRDANATL-------LKEHFDRSNDVLLSTCYEQILKKDPTCCHSLLKLVHMHKNTVCNYSLEYLMEMIALHLDGTCVECDT

Query:  WRELAMCFLKLFQLEEDRIS-TCSIGTG
        WREL MCFLKL Q+EEDR+S  CSIG+G
Subjt:  WRELAMCFLKLFQLEEDRIS-TCSIGTG

KAG7031054.1 hypothetical protein SDJN02_05093 [Cucurbita argyrosperma subsp. argyrosperma]

2.8e-44

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Query:  LLLVGGRVDKALNQMENICRDANATL-------LKEHFDRSNDVLLSTCYEQILKKDPTCCHSLLKLVHMHKNTVCNYSLEYLMEMIALHLDGTCVECDT
        LLL+GGRVDKAL++MENICRD+NATL       L EHFD SN +LLSTCYE+ILKKDPTCCHSL KLVHMH+N   NYSLE L+EMIALHLDGTC E DT
Subjt:  LLLVGGRVDKALNQMENICRDANATL-------LKEHFDRSNDVLLSTCYEQILKKDPTCCHSLLKLVHMHKNTVCNYSLEYLMEMIALHLDGTCVECDT

Query:  WRELAMCFLKLFQLEEDRIS-TCSIGTG
        WREL MCFLKL Q+EEDR+S  CSIG+G
Subjt:  WRELAMCFLKLFQLEEDRIS-TCSIGTG

XP_022941583.1 uncharacterized protein LOC111446895 [Cucurbita moschata]

5.7e-45

75.78

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Query:  LLLVGGRVDKALNQMENICRDANATL-------LKEHFDRSNDVLLSTCYEQILKKDPTCCHSLLKLVHMHKNTVCNYSLEYLMEMIALHLDGTCVECDT
        LLL+GGRVDKAL++MENICRD+NATL       L EHFD SN +LLSTCYE+ILKKDPTCCHSL KLVHMH+N   NYSLE L+EMIALHLDGTC E DT
Subjt:  LLLVGGRVDKALNQMENICRDANATL-------LKEHFDRSNDVLLSTCYEQILKKDPTCCHSLLKLVHMHKNTVCNYSLEYLMEMIALHLDGTCVECDT

Query:  WRELAMCFLKLFQLEEDRIS-TCSIGTG
        WRELAMCFLKL Q+EEDR+S  CSIG+G
Subjt:  WRELAMCFLKLFQLEEDRIS-TCSIGTG

XP_022979683.1 uncharacterized protein LOC111479331 [Cucurbita maxima]

1.0e-41

74.22

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Query:  LLLVGGRVDKALNQMENICRDANATL-------LKEHFDRSNDVLLSTCYEQILKKDPTCCHSLLKLVHMHKNTVCNYSLEYLMEMIALHLDGTCVECDT
        LLL+GGRVDKAL++MENIC D+NATL       L EHFD SN VLLSTCYE+ILKKDPTCCHSL KLV MH+N   NYSLE L+EMIALHLDGT  E DT
Subjt:  LLLVGGRVDKALNQMENICRDANATL-------LKEHFDRSNDVLLSTCYEQILKKDPTCCHSLLKLVHMHKNTVCNYSLEYLMEMIALHLDGTCVECDT

Query:  WRELAMCFLKLFQLEEDRIS-TCSIGTG
        WRELAMCFLKL Q+EEDR+S  CSIG+G
Subjt:  WRELAMCFLKLFQLEEDRIS-TCSIGTG

XP_023536647.1 uncharacterized protein LOC111797853 [Cucurbita pepo subsp. pepo]

5.7e-45

75.78

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Query:  LLLVGGRVDKALNQMENICRDANATL-------LKEHFDRSNDVLLSTCYEQILKKDPTCCHSLLKLVHMHKNTVCNYSLEYLMEMIALHLDGTCVECDT
        LLL+GGRVDKAL++MENICRD+NATL       L EHFD SN +LLSTCYE+ILKKDPTCCHSL KLVHMH+N   NYSLE L+EMIALHLDGTC E DT
Subjt:  LLLVGGRVDKALNQMENICRDANATL-------LKEHFDRSNDVLLSTCYEQILKKDPTCCHSLLKLVHMHKNTVCNYSLEYLMEMIALHLDGTCVECDT

Query:  WRELAMCFLKLFQLEEDRIS-TCSIGTG
        WRELAMCFLKL Q+EEDR+S  CSIG+G
Subjt:  WRELAMCFLKLFQLEEDRIS-TCSIGTG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KXN5 Uncharacterized protein

4.5e-40

69.53

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Query:  LLLVGGRVDKALNQMENICRDANATL-------LKEHFDRSNDVLLSTCYEQILKKDPTCCHSLLKLVHMHKNTVCNYSLEYLMEMIALHLDGTCVECDT
        LLL+GGR+DKAL++ME  C D+NA L       L EHFDRSN+VLLSTCYEQ LKKDPTCCHS+ KLV MH+N   NY+LE L+EMIALHLDGT  E DT
Subjt:  LLLVGGRVDKALNQMENICRDANATL-------LKEHFDRSNDVLLSTCYEQILKKDPTCCHSLLKLVHMHKNTVCNYSLEYLMEMIALHLDGTCVECDT

Query:  WRELAMCFLKLFQLEEDRIS-TCSIGTG
        WRELA+CFL+L Q EEDR+S  CSIGTG
Subjt:  WRELAMCFLKLFQLEEDRIS-TCSIGTG

A0A1S3BS63 uncharacterized protein LOC103492916

7.7e-40

70.31

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Query:  LLLVGGRVDKALNQMENICRDANATL-------LKEHFDRSNDVLLSTCYEQILKKDPTCCHSLLKLVHMHKNTVCNYSLEYLMEMIALHLDGTCVECDT
        LLL+GGR+DKAL++ME  C D+NA L       L EHFDRSN+VLLSTCYEQ LKKDPTC HS+ KLV MH+N   NY+LE L+EMIALHLDGT  E DT
Subjt:  LLLVGGRVDKALNQMENICRDANATL-------LKEHFDRSNDVLLSTCYEQILKKDPTCCHSLLKLVHMHKNTVCNYSLEYLMEMIALHLDGTCVECDT

Query:  WRELAMCFLKLFQLEEDRIST-CSIGTG
        WRELA+CFLKL Q EEDR+ST CSIGTG
Subjt:  WRELAMCFLKLFQLEEDRIST-CSIGTG

A0A6J1CPA4 uncharacterized protein LOC111012919

1.4e-41

72.87

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Query:  LLLVGGRVDKALNQMENICRDANATL-------LKEHFDRSNDVLLSTCYEQILKKDPTCCHSLLKLVHMHKNTVCNYSLEYLMEMIALHL-DGTCVECD
        LLL+GGRVDKAL ++E IC D+NA L       L EHFDRSNDVLLS+CYEQILKKDPTCCHSL KLV MH+N   NY+LE L+EMI LHL DGTCVE D
Subjt:  LLLVGGRVDKALNQMENICRDANATL-------LKEHFDRSNDVLLSTCYEQILKKDPTCCHSLLKLVHMHKNTVCNYSLEYLMEMIALHL-DGTCVECD

Query:  TWRELAMCFLKLFQLEEDRIST-CSIGTG
         WRELA+CFLKL Q EEDR+ST CSIGTG
Subjt:  TWRELAMCFLKLFQLEEDRIST-CSIGTG

A0A6J1FSH8 uncharacterized protein LOC111446895

2.7e-45

75.78

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Query:  LLLVGGRVDKALNQMENICRDANATL-------LKEHFDRSNDVLLSTCYEQILKKDPTCCHSLLKLVHMHKNTVCNYSLEYLMEMIALHLDGTCVECDT
        LLL+GGRVDKAL++MENICRD+NATL       L EHFD SN +LLSTCYE+ILKKDPTCCHSL KLVHMH+N   NYSLE L+EMIALHLDGTC E DT
Subjt:  LLLVGGRVDKALNQMENICRDANATL-------LKEHFDRSNDVLLSTCYEQILKKDPTCCHSLLKLVHMHKNTVCNYSLEYLMEMIALHLDGTCVECDT

Query:  WRELAMCFLKLFQLEEDRIS-TCSIGTG
        WRELAMCFLKL Q+EEDR+S  CSIG+G
Subjt:  WRELAMCFLKLFQLEEDRIS-TCSIGTG

A0A6J1IWZ8 uncharacterized protein LOC111479331

4.8e-42

74.22

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Query:  LLLVGGRVDKALNQMENICRDANATL-------LKEHFDRSNDVLLSTCYEQILKKDPTCCHSLLKLVHMHKNTVCNYSLEYLMEMIALHLDGTCVECDT
        LLL+GGRVDKAL++MENIC D+NATL       L EHFD SN VLLSTCYE+ILKKDPTCCHSL KLV MH+N   NYSLE L+EMIALHLDGT  E DT
Subjt:  LLLVGGRVDKALNQMENICRDANATL-------LKEHFDRSNDVLLSTCYEQILKKDPTCCHSLLKLVHMHKNTVCNYSLEYLMEMIALHLDGTCVECDT

Query:  WRELAMCFLKLFQLEEDRIS-TCSIGTG
        WRELAMCFLKL Q+EEDR+S  CSIG+G
Subjt:  WRELAMCFLKLFQLEEDRIS-TCSIGTG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G53200.1 unknown protein

5.7e-19

41.73

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Query:  LLLVGGRVDKALNQMENICRDAN-------ATLLKEHFDRSNDVLLSTCYEQILKKDPTCCHSLLKLVHMHKNTVCNYSLEYLMEMIALHLDGTCVECDT
        +LL+GG VD+A+  +E +C   +         L+ E F R++D +L+ CYE ILK DP C  +L KL+ M       YS E L EMIALH++ +  E + 
Subjt:  LLLVGGRVDKALNQMENICRDAN-------ATLLKEHFDRSNDVLLSTCYEQILKKDPTCCHSLLKLVHMHKNTVCNYSLEYLMEMIALHLDGTCVECDT

Query:  WRELAMCFLKLFQ-LEEDRISTCSIGT
        W+ELA CF   F+ L+EDR+S C  G+
Subjt:  WRELAMCFLKLFQ-LEEDRISTCSIGT

AT1G53200.2 unknown protein

5.7e-19

41.73

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Query:  LLLVGGRVDKALNQMENICRDAN-------ATLLKEHFDRSNDVLLSTCYEQILKKDPTCCHSLLKLVHMHKNTVCNYSLEYLMEMIALHLDGTCVECDT
        +LL+GG VD+A+  +E +C   +         L+ E F R++D +L+ CYE ILK DP C  +L KL+ M       YS E L EMIALH++ +  E + 
Subjt:  LLLVGGRVDKALNQMENICRDAN-------ATLLKEHFDRSNDVLLSTCYEQILKKDPTCCHSLLKLVHMHKNTVCNYSLEYLMEMIALHLDGTCVECDT

Query:  WRELAMCFLKLFQ-LEEDRISTCSIGT
        W+ELA CF   F+ L+EDR+S C  G+
Subjt:  WRELAMCFLKLFQ-LEEDRISTCSIGT

Sequences

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CDS sequence

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ATGGGGAATCCAACGCGCATCACTTCCTCAAAATTTCAAGGCACAATTGGAGCCGTGTTTGTAGAGGCTTTTGCCTTCTATCTTCGCTCCCTTTTTGGACTGTTGTTGTT
GGTTGGAGGTCGAGTTGACAAAGCACTCAATCAAATGGAAAATATCTGTCGTGATGCCAATGCAACACTTCTCAAAGAACATTTTGATCGTAGTAACGATGTCTTGCTTT
CAACTTGTTATGAGCAAATATTGAAGAAGGATCCAACATGTTGTCATTCACTGCTAAAACTAGTTCACATGCATAAAAACACGGTATGCAATTACAGTCTTGAATATCTG
ATGGAAATGATAGCTTTGCATTTAGATGGTACATGTGTGGAATGTGATACATGGAGAGAGTTGGCTATGTGTTTTCTGAAACTTTTTCAATTGGAAGAGGATAGAATATC
AACATGTTCAATTGGGACAGGTTGA

mRNA sequence

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Protein sequence

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MGNPTRITSSKFQGTIGAVFVEAFAFYLRSLFGLLLLVGGRVDKALNQMENICRDANATLLKEHFDRSNDVLLSTCYEQILKKDPTCCHSLLKLVHMHKNTVCNYSLEYL
MEMIALHLDGTCVECDTWRELAMCFLKLFQLEEDRISTCSIGTG

Tan0010066 (gene) of Snake gourd v1 genome