; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0010097 (gene) of Snake gourd v1 genome

Gene IDTan0010097
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionNuclear transcription factor Y subunit C
Genome locationLG02:36322198..36324996
RNA-Seq ExpressionTan0010097
SyntenyTan0010097
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR007125 - Histone H2A/H2B/H3
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136852.1 nuclear transcription factor Y subunit C-2 [Cucumis sativus]2.3e-13496.6Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQPAGGVGAGQL YSNPYQTAPMVASG PAI+IP TQ PSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQPPRPQMPFMPWPHTQSQQQQQTQQQSD
        SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQ PRP MPFMPWPHTQ QQQQQTQQQSD
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQPPRPQMPFMPWPHTQSQQQQQTQQQSD

XP_022157652.1 nuclear transcription factor Y subunit C-2 [Momordica charantia]3.1e-13194.74Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQPAGGVGAGQLPYSNPY+T  MVASG PAI+IP TQ PSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQPPRPQMPFMPWPHTQSQQQQQTQQQSDA
        SPADLPYYYVP QHPV A GMIMGKQLDQANMYG TAQ PRP MPFMPWPHTQ QQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQPPRPQMPFMPWPHTQSQQQQQTQQQSDA

XP_022927856.1 nuclear transcription factor Y subunit C-2-like [Cucurbita moschata]2.0e-13094.05Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQ AGGVGAGQLPYSNPYQTAPM ASG PAI+IP TQQPSSFSNSPHQLA+QQAQHFH QQQQQQQQQLQ+FWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQPPRPQMPFMPWPHTQS---QQQQQTQQQSDA
        SPADLPYYYVPSQHPV ATGMIMGKQLDQANMYGATAQ PRP +PFMPWPHTQ+   QQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQPPRPQMPFMPWPHTQS---QQQQQTQQQSDA

XP_022988890.1 nuclear transcription factor Y subunit C-2-like [Cucurbita maxima]6.8e-13194.42Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQ AGGVGAGQLPYSNPYQTAPM ASG PAI+IP TQQPSSFSNSPHQLA+QQAQHFH QQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQPPRPQMPFMPWPHTQS---QQQQQTQQQSDA
        SPADLPYYYVPSQHPV ATGMIMGKQLDQANMYGATAQ PRP +PFMPWPHTQ+   QQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQPPRPQMPFMPWPHTQS---QQQQQTQQQSDA

XP_038888434.1 nuclear transcription factor Y subunit C-2-like [Benincasa hispida]8.6e-13495.86Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQH QQSQQPAG VGAGQLPYSNPYQTAPMVASG PAI+IP TQ PSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQPPRPQMPFMPWPHTQSQQQQQTQQQSDA
        SPADLPYYYVPSQHPVGATGMIMGKQLDQ NMYG TAQ PRP MPFMPWPHTQ QQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQPPRPQMPFMPWPHTQSQQQQQTQQQSDA

TrEMBL top hitse value%identityAlignment
A0A0A0K5U1 Histone domain-containing protein1.1e-13496.6Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQPAGGVGAGQL YSNPYQTAPMVASG PAI+IP TQ PSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQPPRPQMPFMPWPHTQSQQQQQTQQQSD
        SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQ PRP MPFMPWPHTQ QQQQQTQQQSD
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQPPRPQMPFMPWPHTQSQQQQQTQQQSD

A0A1S3C190 nuclear transcription factor Y subunit C-21.1e-13496.6Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQPAGGVGAGQL YSNPYQTAPMVASG PAI+IP TQ PSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQPPRPQMPFMPWPHTQSQQQQQTQQQSD
        SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQ PRP MPFMPWPHTQ QQQQQTQQQSD
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQPPRPQMPFMPWPHTQSQQQQQTQQQSD

A0A5A7SLP2 Nuclear transcription factor Y subunit C-21.1e-13496.6Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQPAGGVGAGQL YSNPYQTAPMVASG PAI+IP TQ PSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQPPRPQMPFMPWPHTQSQQQQQTQQQSD
        SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQ PRP MPFMPWPHTQ QQQQQTQQQSD
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQPPRPQMPFMPWPHTQSQQQQQTQQQSD

A0A6J1DV19 nuclear transcription factor Y subunit C-21.5e-13194.74Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQPAGGVGAGQLPYSNPY+T  MVASG PAI+IP TQ PSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQPPRPQMPFMPWPHTQSQQQQQTQQQSDA
        SPADLPYYYVP QHPV A GMIMGKQLDQANMYG TAQ PRP MPFMPWPHTQ QQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQPPRPQMPFMPWPHTQSQQQQQTQQQSDA

A0A6J1JII4 nuclear transcription factor Y subunit C-2-like3.3e-13194.42Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK
        MDQSERSQHQQQSQQ AGGVGAGQLPYSNPYQTAPM ASG PAI+IP TQQPSSFSNSPHQLA+QQAQHFH QQQQQQQQQLQMFWANQMQEIEQTTDFK
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQPPRPQMPFMPWPHTQS---QQQQQTQQQSDA
        SPADLPYYYVPSQHPV ATGMIMGKQLDQANMYGATAQ PRP +PFMPWPHTQ+   QQQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQPPRPQMPFMPWPHTQS---QQQQQTQQQSDA

SwissProt top hitse value%identityAlignment
Q655V5 Nuclear transcription factor Y subunit C-42.6e-6460.92Show/hide
Query:  QPAGGVGAGQLPYSNPYQTAPMVASGAPAISIPSTQQPS-SFSNSP------HQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLA
        QPA GV AG       Y+ A  V + APA+ IP+  QP+ SF  +P      HQL YQQAQ FH Q QQQQQ+QLQ FWA ++ +IEQTTDFKNHSLPLA
Subjt:  QPAGGVGAGQLPYSNPYQTAPMVASGAPAISIPSTQQPS-SFSNSP------HQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLA

Query:  RIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPAD-LP
        RIKKIMKADEDVRMISAEAPVIFAKACE+FILELTLRSW+HTEENKRRTLQKNDIAAAI+RTD++DFLVDI+PRD+LKEEG+G+ +A +P +G PAD  P
Subjt:  RIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPAD-LP

Query:  Y-YYVPSQHPVGATGMIMGKQLDQANMYGATAQPPRPQMPFMPWPHTQSQQQQ-QTQQQSD
        Y YYVP Q   GA G+  G Q                  P   W   Q QQ++   +QQSD
Subjt:  Y-YYVPSQHPVGATGMIMGKQLDQANMYGATAQPPRPQMPFMPWPHTQSQQQQ-QTQQQSD

Q8L4B2 Nuclear transcription factor Y subunit C-91.3e-5555.04Show/hide
Query:  QQSQQPAGGVGAGQLPYSNPYQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLAR
        QQ    +G +  G    +NPYQT PM  + A           +  +  P QLA+ Q     HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLAR
Subjt:  QQSQQPAGGVGAGQLPYSNPYQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLAR

Query:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPY
        IKKIMKADEDVRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY
Subjt:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPY

Query:  YYVPS-QHPVGATGMIMGKQLDQANMYGATAQPPRPQMPFMPWPHTQSQQQQQTQQQS
         Y+P+   P+G  GM+MG            A PP    P+M  P  Q Q   Q  Q++
Subjt:  YYVPS-QHPVGATGMIMGKQLDQANMYGATAQPPRPQMPFMPWPHTQSQQQQQTQQQS

Q8LCG7 Nuclear transcription factor Y subunit C-22.5e-6769.44Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNP--YQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTD
        M+QSE  Q QQQ          G + Y  P  YQ+ P+                    N+   +A+QQA HFHH  QQQQQQQLQMFWANQMQEIE TTD
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNP--YQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTD

Query:  FKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-
        FKNH+LPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TK +IP 
Subjt:  FKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-

Query:  VVGSPADLPYYYVPSQ
        VVGSP   PYYY+  Q
Subjt:  VVGSPADLPYYYVPSQ

Q9FMV5 Nuclear transcription factor Y subunit C-45.9e-5365.32Show/hide
Query:  HHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTD
        +H   QQQQQQLQMFW  Q QEIEQ  DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT+RSW+H EENKRRTLQKNDIAAAI+RTD
Subjt:  HHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTD

Query:  VFDFLVDIIPRDELKEEGLGITKASIPVVGSPA--DLPYYYVPSQHPVGATGMIMGK-QLDQANMYGATAQPP
        +FDFLVDI+PR+E+KEE    +      + +PA   +PYYY P   P    GM++G+  +D + +Y   AQPP
Subjt:  VFDFLVDIIPRDELKEEGLGITKASIPVVGSPA--DLPYYYVPSQHPVGATGMIMGK-QLDQANMYGATAQPP

Q9SMP0 Nuclear transcription factor Y subunit C-11.1e-5465.29Show/hide
Query:  HHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTD
        +H   QQQQQQLQ+FW  Q QEIEQ  DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT+RSW+H EENKRRTLQKNDIAAAI+RTD
Subjt:  HHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTD

Query:  VFDFLVDIIPRDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQPP
        +FDFLVDI+PRDE+K+E   +    + V  + + +PYYY P   P G  GM++G+     N  G   QPP
Subjt:  VFDFLVDIIPRDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVGATGMIMGKQLDQANMYGATAQPP

Arabidopsis top hitse value%identityAlignment
AT1G08970.1 nuclear factor Y, subunit C99.1e-5755.04Show/hide
Query:  QQSQQPAGGVGAGQLPYSNPYQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLAR
        QQ    +G +  G    +NPYQT PM  + A           +  +  P QLA+ Q     HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLAR
Subjt:  QQSQQPAGGVGAGQLPYSNPYQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLAR

Query:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPY
        IKKIMKADEDVRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY
Subjt:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPY

Query:  YYVPS-QHPVGATGMIMGKQLDQANMYGATAQPPRPQMPFMPWPHTQSQQQQQTQQQS
         Y+P+   P+G  GM+MG            A PP    P+M  P  Q Q   Q  Q++
Subjt:  YYVPS-QHPVGATGMIMGKQLDQANMYGATAQPPRPQMPFMPWPHTQSQQQQQTQQQS

AT1G08970.3 nuclear factor Y, subunit C99.1e-5755.04Show/hide
Query:  QQSQQPAGGVGAGQLPYSNPYQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLAR
        QQ    +G +  G    +NPYQT PM  + A           +  +  P QLA+ Q     HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLAR
Subjt:  QQSQQPAGGVGAGQLPYSNPYQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLAR

Query:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPY
        IKKIMKADEDVRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY
Subjt:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPY

Query:  YYVPS-QHPVGATGMIMGKQLDQANMYGATAQPPRPQMPFMPWPHTQSQQQQQTQQQS
         Y+P+   P+G  GM+MG            A PP    P+M  P  Q Q   Q  Q++
Subjt:  YYVPS-QHPVGATGMIMGKQLDQANMYGATAQPPRPQMPFMPWPHTQSQQQQQTQQQS

AT1G08970.4 nuclear factor Y, subunit C99.1e-5755.04Show/hide
Query:  QQSQQPAGGVGAGQLPYSNPYQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLAR
        QQ    +G +  G    +NPYQT PM  + A           +  +  P QLA+ Q     HQQQQQQQ  QQLQ FW NQ +EIE+TTDFKNHSLPLAR
Subjt:  QQSQQPAGGVGAGQLPYSNPYQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQ--QQLQMFWANQMQEIEQTTDFKNHSLPLAR

Query:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPY
        IKKIMKADEDVRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY
Subjt:  IKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPY

Query:  YYVPS-QHPVGATGMIMGKQLDQANMYGATAQPPRPQMPFMPWPHTQSQQQQQTQQQS
         Y+P+   P+G  GM+MG            A PP    P+M  P  Q Q   Q  Q++
Subjt:  YYVPS-QHPVGATGMIMGKQLDQANMYGATAQPPRPQMPFMPWPHTQSQQQQQTQQQS

AT1G56170.1 nuclear factor Y, subunit C21.8e-6869.44Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNP--YQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTD
        M+QSE  Q QQQ          G + Y  P  YQ+ P+                    N+   +A+QQA HFHH  QQQQQQQLQMFWANQMQEIE TTD
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNP--YQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTD

Query:  FKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-
        FKNH+LPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TK +IP 
Subjt:  FKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-

Query:  VVGSPADLPYYYVPSQ
        VVGSP   PYYY+  Q
Subjt:  VVGSPADLPYYYVPSQ

AT1G56170.2 nuclear factor Y, subunit C21.8e-6869.44Show/hide
Query:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNP--YQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTD
        M+QSE  Q QQQ          G + Y  P  YQ+ P+                    N+   +A+QQA HFHH  QQQQQQQLQMFWANQMQEIE TTD
Subjt:  MDQSERSQHQQQSQQPAGGVGAGQLPYSNP--YQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTD

Query:  FKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-
        FKNH+LPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR+WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TK +IP 
Subjt:  FKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-

Query:  VVGSPADLPYYYVPSQ
        VVGSP   PYYY+  Q
Subjt:  VVGSPADLPYYYVPSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCAATCAGAGCGTTCTCAGCATCAGCAACAATCACAGCAGCCTGCAGGCGGTGTCGGTGCAGGACAACTACCGTATTCTAATCCTTACCAAACAGCTCCAATGGT
GGCTTCTGGAGCTCCTGCTATTTCGATTCCATCGACTCAGCAACCATCCAGTTTCTCTAATTCTCCGCACCAGCTTGCCTATCAGCAGGCTCAGCACTTCCACCACCAGC
AACAGCAGCAGCAGCAGCAGCAGCTCCAAATGTTTTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTCAAGAACCACAGTCTCCCCCTTGCTCGAATCAAG
AAAATAATGAAAGCCGATGAAGACGTCCGAATGATTTCGGCTGAAGCACCAGTAATATTTGCAAAGGCGTGTGAAATGTTCATCTTGGAGTTGACTCTGCGATCCTGGAT
TCATACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAATGATATTGCAGCTGCGATTTCAAGGACCGATGTCTTCGATTTCTTGGTTGATATTATTCCTAGGGATGAAC
TGAAAGAGGAAGGTCTCGGAATCACAAAAGCTTCTATTCCCGTAGTTGGTTCCCCTGCTGATCTTCCTTATTACTATGTTCCATCGCAGCATCCAGTGGGTGCTACAGGG
ATGATCATGGGGAAGCAATTAGATCAAGCGAACATGTACGGTGCCACTGCTCAACCGCCCCGACCACAGATGCCATTCATGCCATGGCCACATACTCAATCTCAGCAGCA
GCAGCAAACTCAGCAGCAAAGTGATGCATAG
mRNA sequenceShow/hide mRNA sequence
GCTCTCACTCCTCGACACGTTTCTCTTTTATACCATCCCTCTCTCTCTCTCTCTCAACACCTTCCTTGAAGCCTTCTCAATCTCTCTCTCTCTCTCCCTCTCCCTCTCCC
TCTCTTGATCCTTCTCTCTGTTTCTCTCTTAGGGTTTCTGCTTTGCTACTCATGAGCTTTGCTGGAGTTCCTCTTTCAAAATCAGAGTGAGGAAAATACACTACGGATTG
TGAGCCATGGATCAATCAGAGCGTTCTCAGCATCAGCAACAATCACAGCAGCCTGCAGGCGGTGTCGGTGCAGGACAACTACCGTATTCTAATCCTTACCAAACAGCTCC
AATGGTGGCTTCTGGAGCTCCTGCTATTTCGATTCCATCGACTCAGCAACCATCCAGTTTCTCTAATTCTCCGCACCAGCTTGCCTATCAGCAGGCTCAGCACTTCCACC
ACCAGCAACAGCAGCAGCAGCAGCAGCAGCTCCAAATGTTTTGGGCAAACCAAATGCAAGAGATTGAACAAACAACTGACTTCAAGAACCACAGTCTCCCCCTTGCTCGA
ATCAAGAAAATAATGAAAGCCGATGAAGACGTCCGAATGATTTCGGCTGAAGCACCAGTAATATTTGCAAAGGCGTGTGAAATGTTCATCTTGGAGTTGACTCTGCGATC
CTGGATTCATACAGAAGAGAACAAAAGGAGAACTTTACAGAAGAATGATATTGCAGCTGCGATTTCAAGGACCGATGTCTTCGATTTCTTGGTTGATATTATTCCTAGGG
ATGAACTGAAAGAGGAAGGTCTCGGAATCACAAAAGCTTCTATTCCCGTAGTTGGTTCCCCTGCTGATCTTCCTTATTACTATGTTCCATCGCAGCATCCAGTGGGTGCT
ACAGGGATGATCATGGGGAAGCAATTAGATCAAGCGAACATGTACGGTGCCACTGCTCAACCGCCCCGACCACAGATGCCATTCATGCCATGGCCACATACTCAATCTCA
GCAGCAGCAGCAAACTCAGCAGCAAAGTGATGCATAGGTAAAAGTAGTTGGTGTTTTCAGGACAGTCGTGATATGATTGGTAGAGGCGATACCGAGTGATGTTTAATGTG
TTTACTGTCTAGTTAGTTCATAAAAAATAGCTGAGTAGAGAACTTGTCAATGATGACAAGTTGCAGTTGAGTTTGTATGATGAGAAGGTGTTTATCTGATATTACTCTAA
TTATCTATCACTATGATGTACAACAATGTATGTGGGAGAGGATTCAACTTTGGCAAAAGAACTTAAATTTCAATTTTGTTGAGGCTGTGTTGGGCTAAACCTCTCTTTAA
TTCTAATTTTAGGTTCAAAGCAGAAAGGATGAAGATTTTAAGCAAAAACTAGCAAACTGAACACCCTTCTTGAAAGGAAAAGAAGCTCCCTCCCTCCCCCTATACCTTCT
TTGTTTAAATTTTGGTCCAATTTTAAATAAATAAATAAATAAATAAA
Protein sequenceShow/hide protein sequence
MDQSERSQHQQQSQQPAGGVGAGQLPYSNPYQTAPMVASGAPAISIPSTQQPSSFSNSPHQLAYQQAQHFHHQQQQQQQQQLQMFWANQMQEIEQTTDFKNHSLPLARIK
KIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPVGATG
MIMGKQLDQANMYGATAQPPRPQMPFMPWPHTQSQQQQQTQQQSDA