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Tan0010101 (gene) of Snake gourd v1 genome

Gene IDTan0010101
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPathogen induced 4 protein
Genome locationLG06:76598096..76598737
RNA-Seq ExpressionTan0010101
SyntenyTan0010101
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABF19725.1 pathogen induced 4 protein [Cucumis sativus]9.4e-0550Show/hide
Query:  MSPKFLLILLLGVILLTSQALARSYFSPETHLKVSPSATDSSAVGETLRIKIKFPWKKKLPRPDLPPITV-----PSPPPRRHHKPKPPTSN
        MS K L+ILLLGVILL++Q +AR Y+  E H +++PSAT  SAVGE+L+ K+  PW KK+  P  PP +         PPRR  + KPP+SN
Subjt:  MSPKFLLILLLGVILLTSQALARSYFSPETHLKVSPSATDSSAVGETLRIKIKFPWKKKLPRPDLPPITV-----PSPPPRRHHKPKPPTSN
XP_016902583.1 PREDICTED: uncharacterized protein LOC107991740 [Cucumis melo]4.2e-0556.25Show/hide
Query:  MSPKFLLILLLGVILLTS-QALARSYFSPETHLKVSPSATDSSAVGETLRIKIKFPW-KKKLP-RPDLPPITVPSPPPRR
        MS K L+ILLLGVILL+S Q +AR+Y+ PE H +++PSAT  SAVG++L  K+  PW KK  P +P LP I  P PPPR+
Subjt:  MSPKFLLILLLGVILLTS-QALARSYFSPETHLKVSPSATDSSAVGETLRIKIKFPW-KKKLP-RPDLPPITVPSPPPRR
TrEMBL top hitse value%identityAlignment
A0A1S4E2Y7 uncharacterized protein LOC1079917402.0e-0556.25Show/hide
Query:  MSPKFLLILLLGVILLTS-QALARSYFSPETHLKVSPSATDSSAVGETLRIKIKFPW-KKKLP-RPDLPPITVPSPPPRR
        MS K L+ILLLGVILL+S Q +AR+Y+ PE H +++PSAT  SAVG++L  K+  PW KK  P +P LP I  P PPPR+
Subjt:  MSPKFLLILLLGVILLTS-QALARSYFSPETHLKVSPSATDSSAVGETLRIKIKFPW-KKKLP-RPDLPPITVPSPPPRR
A0MCW3 Pathogen induced 4 protein4.6e-0550Show/hide
Query:  MSPKFLLILLLGVILLTSQALARSYFSPETHLKVSPSATDSSAVGETLRIKIKFPWKKKLPRPDLPPITV-----PSPPPRRHHKPKPPTSN
        MS K L+ILLLGVILL++Q +AR Y+  E H +++PSAT  SAVGE+L+ K+  PW KK+  P  PP +         PPRR  + KPP+SN
Subjt:  MSPKFLLILLLGVILLTSQALARSYFSPETHLKVSPSATDSSAVGETLRIKIKFPWKKKLPRPDLPPITV-----PSPPPRRHHKPKPPTSN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCCAAAATTTTTGCTTATTCTTCTTCTTGGAGTGATTCTTCTTACCTCTCAAGCTCTTGCTCGATCTTATTTCTCGCCGGAGACCCACCTGAAAGTGTCTCCCTC
CGCCACCGACTCATCGGCGGTCGGTGAGACTTTGAGGATCAAAATAAAATTCCCATGGAAGAAAAAATTACCAAGACCCGATCTCCCACCCATTACCGTGCCGTCGCCAC
CGCCACGGCGCCACCACAAGCCGAAGCCACCCACCTCCAACTGA
mRNA sequenceShow/hide mRNA sequence
AGTGAAACCCAAAGAAAAGAGAAAAAAAAAAAAATGTCTCCAAAATTTTTGCTTATTCTTCTTCTTGGAGTGATTCTTCTTACCTCTCAAGCTCTTGCTCGATCTTATTT
CTCGCCGGAGACCCACCTGAAAGTGTCTCCCTCCGCCACCGACTCATCGGCGGTCGGTGAGACTTTGAGGATCAAAATAAAATTCCCATGGAAGAAAAAATTACCAAGAC
CCGATCTCCCACCCATTACCGTGCCGTCGCCACCGCCACGGCGCCACCACAAGCCGAAGCCACCCACCTCCAACTGAATGCCAATGGAGACCTAAGTTGAAGTCATTTAT
AGGTGTTTAATAAATATGCATCATCACCAAAACTGCGGTGTGTGATTTCAAATTTGTTTTTTTTTTTCTACGAGTGTTCGGACCAGCTTGACACACTTGCACATTAACGA
GACAAACACATGATAAGTTTAAGATGGATGGTTATTCCAATTTACTTTTTATATAATATGTTATTATTGTTGCAATCTAAATACAACAAGTTTCAATTTGAATTTCTTAT
CTCAAAGAAAAAGGTTAAATATATTGCTTATTTGAATAATATATAAGTTTGAACGCATATGATTACATTTTTTAATTATATGTTGTCTTTAA
Protein sequenceShow/hide protein sequence
MSPKFLLILLLGVILLTSQALARSYFSPETHLKVSPSATDSSAVGETLRIKIKFPWKKKLPRPDLPPITVPSPPPRRHHKPKPPTSN