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Tan0010103 (gene) of Snake gourd v1 genome

Gene IDTan0010103
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag/pol protein
Genome locationLG11:33227802..33228044
RNA-Seq ExpressionTan0010103
SyntenyTan0010103
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]1.9e-2373.75Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVLYDALKYVYNSRMKEETSVREHVFNMMVHFNVTEVNGAVIDENSQVSFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  + +DALKY+YN+RM E  SVREHV NMMVHFNV E+NGAVIDE SQVSFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSVLYDALKYVYNSRMKEETSVREHVFNMMVHFNVTEVNGAVIDENSQVSFIMESLPKSFL
KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]1.9e-2373.75Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVLYDALKYVYNSRMKEETSVREHVFNMMVHFNVTEVNGAVIDENSQVSFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  + +DALKY+YN+RM E  SVREHV NMMVHFNV E+NGAVIDE SQVSFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSVLYDALKYVYNSRMKEETSVREHVFNMMVHFNVTEVNGAVIDENSQVSFIMESLPKSFL
KAA0058447.1 gag/pol protein [Cucumis melo var. makuwa]1.1e-2373.75Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVLYDALKYVYNSRMKEETSVREHVFNMMVHFNVTEVNGAVIDENSQVSFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  + +DALKY+YN+RM E  SVREHV NMMVHFNV E+NGAVIDE SQVSFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSVLYDALKYVYNSRMKEETSVREHVFNMMVHFNVTEVNGAVIDENSQVSFIMESLPKSFL
XP_038876370.1 uncharacterized protein LOC120068812, partial [Benincasa hispida]3.7e-2474.68Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVLYDALKYVYNSRMKEETSVREHVFNMMVHFNVTEVNGAVIDENSQVSFIMESLPKSF
        M+TAKEIM SLQA+FGQPSSS ++DA+K+VYN RMKE  +VREHV +MMVHFN+TEVN AV++E SQV FIMESLPKSF
Subjt:  MITAKEIMGSLQAMFGQPSSSVLYDALKYVYNSRMKEETSVREHVFNMMVHFNVTEVNGAVIDENSQVSFIMESLPKSF
XP_038880476.1 uncharacterized protein LOC120072136 [Benincasa hispida]1.1e-2373.42Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVLYDALKYVYNSRMKEETSVREHVFNMMVHFNVTEVNGAVIDENSQVSFIMESLPKSF
        M+ AKEIM SLQA+FGQPSSS ++DA+KYVYN RMKE T+VREHV +MMVHFN+ EVNGAV++E +Q  FIMESLPKSF
Subjt:  MITAKEIMGSLQAMFGQPSSSVLYDALKYVYNSRMKEETSVREHVFNMMVHFNVTEVNGAVIDENSQVSFIMESLPKSF
TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein9.0e-2473.75Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVLYDALKYVYNSRMKEETSVREHVFNMMVHFNVTEVNGAVIDENSQVSFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  + +DALKY+YN+RM E  SVREHV NMMVHFNV E+NGAVIDE SQVSFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSVLYDALKYVYNSRMKEETSVREHVFNMMVHFNVTEVNGAVIDENSQVSFIMESLPKSFL
A0A5A7TU93 Gag/pol protein9.0e-2473.75Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVLYDALKYVYNSRMKEETSVREHVFNMMVHFNVTEVNGAVIDENSQVSFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  + +DALKY+YN+RM E  SVREHV NMMVHFNV E+NGAVIDE SQVSFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSVLYDALKYVYNSRMKEETSVREHVFNMMVHFNVTEVNGAVIDENSQVSFIMESLPKSFL
A0A5A7UUN7 Gag/pol protein5.3e-2473.75Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVLYDALKYVYNSRMKEETSVREHVFNMMVHFNVTEVNGAVIDENSQVSFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  + +DALKY+YN+RM E  SVREHV NMMVHFNV E+NGAVIDE SQVSFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSVLYDALKYVYNSRMKEETSVREHVFNMMVHFNVTEVNGAVIDENSQVSFIMESLPKSFL
A0A5A7V4M1 Gag/pol protein9.0e-2473.75Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVLYDALKYVYNSRMKEETSVREHVFNMMVHFNVTEVNGAVIDENSQVSFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  + +DALKY+YN+RM E  SVREHV NMMVHFNV E+NGAVIDE SQVSFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSVLYDALKYVYNSRMKEETSVREHVFNMMVHFNVTEVNGAVIDENSQVSFIMESLPKSFL
A0A5D3CPJ6 Gag/pol protein9.0e-2473.75Show/hide
Query:  MITAKEIMGSLQAMFGQPSSSVLYDALKYVYNSRMKEETSVREHVFNMMVHFNVTEVNGAVIDENSQVSFIMESLPKSFL
        M+TA+EIM SLQ MFGQ S  + +DALKY+YN+RM E  SVREHV NMMVHFNV E+NGAVIDE SQVSFI+ESLP+SFL
Subjt:  MITAKEIMGSLQAMFGQPSSSVLYDALKYVYNSRMKEETSVREHVFNMMVHFNVTEVNGAVIDENSQVSFIMESLPKSFL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCACCGCAAAGGAGATCATGGGATCATTACAGGCCATGTTTGGACAACCGTCCTCATCGGTTCTTTATGATGCTCTCAAGTACGTTTACAACTCCCGAATGAAGGA
GGAAACTTCTGTTAGGGAGCATGTTTTTAATATGATGGTCCACTTCAACGTGACAGAGGTAAACGGGGCTGTCATTGATGAGAACAGTCAGGTTAGCTTTATAATGGAAT
CTCTTCCGAAGAGTTTCTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCACCGCAAAGGAGATCATGGGATCATTACAGGCCATGTTTGGACAACCGTCCTCATCGGTTCTTTATGATGCTCTCAAGTACGTTTACAACTCCCGAATGAAGGA
GGAAACTTCTGTTAGGGAGCATGTTTTTAATATGATGGTCCACTTCAACGTGACAGAGGTAAACGGGGCTGTCATTGATGAGAACAGTCAGGTTAGCTTTATAATGGAAT
CTCTTCCGAAGAGTTTCTTGTAG
Protein sequenceShow/hide protein sequence
MITAKEIMGSLQAMFGQPSSSVLYDALKYVYNSRMKEETSVREHVFNMMVHFNVTEVNGAVIDENSQVSFIMESLPKSFL