CuGenDBv2

Gene ID	Tan0010120
Organism	Trichosanthes anguina (Snake gourd v1)
Description	cleavage stimulating factor 64
Genome location	LG11:8432219..8440660
RNA-Seq Expression	Tan0010120
Synteny	Tan0010120
Gene Ontology terms	GO:0031047 - gene silencing by RNA (biological process) GO:0042868 - antisense RNA metabolic process (biological process) GO:0045892 - negative regulation of transcription, DNA-templated (biological process) GO:0048589 - developmental growth (biological process) GO:0098789 - pre-mRNA cleavage required for polyadenylation (biological process) GO:0005847 - mRNA cleavage and polyadenylation specificity factor complex (cellular component) GO:0003729 - mRNA binding (molecular function)
InterPro domains	IPR000504 - RNA recognition motif domain IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily IPR025742 - Cleavage stimulation factor subunit 2, hinge domain IPR026896 - Transcription termination and cleavage factor, C-terminal domain IPR035979 - RNA-binding domain superfamily IPR038192 - Transcription termination and cleavage factor, C-terminal domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6602216.1 Cleavage stimulating factor 64, partial [Cucurbita argyrosperma subsp. sororia]

1.1e-265

91.84

Show/hide

Query:  MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGP
        MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGP
Subjt:  MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGP

Query:  GLVANAGGPTGHGESSQHQPIGLHIAITAAAVMAGALGGAQSATNQNILQSAAMPNDPLTLHLAKLSRNQLTEVMSGLKVMATQNKDLARQLLLARPQLS
        GLV NAGGPT HGESSQ QPIGLHIAITAAAVMAGALGGAQ+A+NQNILQS  MPNDPLTLHLAKLSR+QLTEVMSGLKVMATQNKDLARQLLLARPQLS
Subjt:  GLVANAGGPTGHGESSQHQPIGLHIAITAAAVMAGALGGAQSATNQNILQSAAMPNDPLTLHLAKLSRNQLTEVMSGLKVMATQNKDLARQLLLARPQLS

Query:  KALFQSQIMLGMVTPQVLQKPNLRQPSTHPQLPLHDMQQGQPSSLQSQPGLPPLVPNRMQTGFVPKKETQMSLAPQNPLAPHQFSASQRPPLQSQIQPSL
        KALFQSQIMLGMVTPQVLQ PNLRQPSTHPQLPLHD+QQGQ SSLQ QPGLPPL PNRMQTGFVPKKETQ+S+ PQNPLAPHQFSASQRPPLQSQIQP+L
Subjt:  KALFQSQIMLGMVTPQVLQKPNLRQPSTHPQLPLHDMQQGQPSSLQSQPGLPPLVPNRMQTGFVPKKETQMSLAPQNPLAPHQFSASQRPPLQSQIQPSL

Query:  ALQGTLTGIPGGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHGEAVIPVHNAQIANPEAKPSLLPRPSLSDSDFQPGPSTAYSASQTVGS
        ALQGTLTGIPGGSLLPS+SLPG++SVRQQVQVP S+SLKQHMRPPSQQYSGHG AVIP HNAQIANPEAKPSLLPRPSL D+DFQPG S AY ASQ VGS
Subjt:  ALQGTLTGIPGGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHGEAVIPVHNAQIANPEAKPSLLPRPSLSDSDFQPGPSTAYSASQTVGS

Query:  DIDKSSQVPLGVDGKRNILHGFSGTTNRPVKQIKLEDGKGSPFSAGGLSASVGTNGSGQLGIASDPNLPGTKISEKPTSMLSRDVESALLQQVLNLTPEQ
        D DKSSQV LGVDGKR I HGFSGTTNRPVKQIKLEDGKGSPFS GGLSASVG NG+ QLGIASDPNLPG +ISEKPTSML  DVESALLQQVLNLTPEQ
Subjt:  DIDKSSQVPLGVDGKRNILHGFSGTTNRPVKQIKLEDGKGSPFSAGGLSASVGTNGSGQLGIASDPNLPGTKISEKPTSMLSRDVESALLQQVLNLTPEQ

Query:  LNSLPLEQRQQVIELQQALRRDQMRPS
        LNSLPLEQRQQVI+LQQALRRDQMRPS
Subjt:  LNSLPLEQRQQVIELQQALRRDQMRPS

XP_022963998.1 cleavage stimulating factor 64 [Cucurbita moschata]

4.2e-265

91.65

Show/hide

Query:  MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGP
        MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGP
Subjt:  MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGP

Query:  GLVANAGGPTGHGESSQHQPIGLHIAITAAAVMAGALGGAQSATNQNILQSAAMPNDPLTLHLAKLSRNQLTEVMSGLKVMATQNKDLARQLLLARPQLS
        GLV NAGGPT HGESSQ QPIGLHIAITAAAVMAGALGGAQ+A+NQNILQS  MPNDPLTLHLAKLSR+QLTEVMSGLKVMATQNKDLARQLLLARPQLS
Subjt:  GLVANAGGPTGHGESSQHQPIGLHIAITAAAVMAGALGGAQSATNQNILQSAAMPNDPLTLHLAKLSRNQLTEVMSGLKVMATQNKDLARQLLLARPQLS

Query:  KALFQSQIMLGMVTPQVLQKPNLRQPSTHPQLPLHDMQQGQPSSLQSQPGLPPLVPNRMQTGFVPKKETQMSLAPQNPLAPHQFSASQRPPLQSQIQPSL
        KALFQSQIMLGMVTPQVLQ PNLRQPSTHPQLPLHD+QQGQ SSLQ QPGLPPL PNRMQTGFVPKKETQ+S+ PQNPLAPHQFSASQRPPLQSQIQP+L
Subjt:  KALFQSQIMLGMVTPQVLQKPNLRQPSTHPQLPLHDMQQGQPSSLQSQPGLPPLVPNRMQTGFVPKKETQMSLAPQNPLAPHQFSASQRPPLQSQIQPSL

Query:  ALQGTLTGIPGGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHGEAVIPVHNAQIANPEAKPSLLPRPSLSDSDFQPGPSTAYSASQTVGS
        AL GTLTGIPGGSLLPS+SLPG++SVRQQVQVP S+SLKQHMRPPSQQYSGHG AVIP HNAQIANPEAKPSLLPRPSL D+DFQPG S AY ASQ VGS
Subjt:  ALQGTLTGIPGGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHGEAVIPVHNAQIANPEAKPSLLPRPSLSDSDFQPGPSTAYSASQTVGS

Query:  DIDKSSQVPLGVDGKRNILHGFSGTTNRPVKQIKLEDGKGSPFSAGGLSASVGTNGSGQLGIASDPNLPGTKISEKPTSMLSRDVESALLQQVLNLTPEQ
        D DKSSQV LGVDGKR I HGFSGTTNRPVKQIKLEDGKGSPFS GGLSASVG NG+ QLGIASDPNLPG +ISEKPTSML  DVESALLQQVLNLTPEQ
Subjt:  DIDKSSQVPLGVDGKRNILHGFSGTTNRPVKQIKLEDGKGSPFSAGGLSASVGTNGSGQLGIASDPNLPGTKISEKPTSMLSRDVESALLQQVLNLTPEQ

Query:  LNSLPLEQRQQVIELQQALRRDQMRPS
        LNSLPLEQRQQVI+LQQALRRDQMRPS
Subjt:  LNSLPLEQRQQVIELQQALRRDQMRPS

XP_022990313.1 cleavage stimulating factor 64 [Cucurbita maxima]

4.2e-265

91.84

Show/hide

Query:  MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGP
        MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGP
Subjt:  MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGP

Query:  GLVANAGGPTGHGESSQHQPIGLHIAITAAAVMAGALGGAQSATNQNILQSAAMPNDPLTLHLAKLSRNQLTEVMSGLKVMATQNKDLARQLLLARPQLS
        GLV NAGGPT HGESSQ QPIGLHIAITAAAVMAGALGGAQ+A+NQNILQS  MPNDPLTLHLAKLSR+QLTE +SGLKVMATQNKDLARQLLLARPQLS
Subjt:  GLVANAGGPTGHGESSQHQPIGLHIAITAAAVMAGALGGAQSATNQNILQSAAMPNDPLTLHLAKLSRNQLTEVMSGLKVMATQNKDLARQLLLARPQLS

Query:  KALFQSQIMLGMVTPQVLQKPNLRQPSTHPQLPLHDMQQGQPSSLQSQPGLPPLVPNRMQTGFVPKKETQMSLAPQNPLAPHQFSASQRPPLQSQIQPSL
        KALFQSQIMLGMVTPQVLQ PNLRQPSTHPQLPLHD+QQGQ SSLQ QPGLPPL PNRMQTGFVPKKETQ+S  PQNPLAPHQFSASQR PLQSQIQPSL
Subjt:  KALFQSQIMLGMVTPQVLQKPNLRQPSTHPQLPLHDMQQGQPSSLQSQPGLPPLVPNRMQTGFVPKKETQMSLAPQNPLAPHQFSASQRPPLQSQIQPSL

Query:  ALQGTLTGIPGGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHGEAVIPVHNAQIANPEAKPSLLPRPSLSDSDFQPGPSTAYSASQTVGS
        ALQGTLTGIPGGSLLPS+SLPG++SVRQQVQVP S+SLKQHMRPPSQQYSGHGEAVIP HNAQIANPEAKPSLLPRPSL D+DFQPG S AY ASQ VGS
Subjt:  ALQGTLTGIPGGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHGEAVIPVHNAQIANPEAKPSLLPRPSLSDSDFQPGPSTAYSASQTVGS

Query:  DIDKSSQVPLGVDGKRNILHGFSGTTNRPVKQIKLEDGKGSPFSAGGLSASVGTNGSGQLGIASDPNLPGTKISEKPTSMLSRDVESALLQQVLNLTPEQ
        D DKSSQV LGVDGKR I HGFSGTTNRPVKQIKLEDGKGSPFSAGGLSASVG NG+ QLGIASDPNLPG +ISEKPTSML  DVESALLQQVLNLTPEQ
Subjt:  DIDKSSQVPLGVDGKRNILHGFSGTTNRPVKQIKLEDGKGSPFSAGGLSASVGTNGSGQLGIASDPNLPGTKISEKPTSMLSRDVESALLQQVLNLTPEQ

Query:  LNSLPLEQRQQVIELQQALRRDQMRPS
        LNSLPLEQRQQVI+LQQALRRDQMRPS
Subjt:  LNSLPLEQRQQVIELQQALRRDQMRPS

XP_023550987.1 cleavage stimulating factor 64 [Cucurbita pepo subsp. pepo]

1.7e-266

92.03

Show/hide

Query:  MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGP
        MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGP
Subjt:  MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGP

Query:  GLVANAGGPTGHGESSQHQPIGLHIAITAAAVMAGALGGAQSATNQNILQSAAMPNDPLTLHLAKLSRNQLTEVMSGLKVMATQNKDLARQLLLARPQLS
        GLV NAGGPT HGESSQ QPIGLHIAITAAAVMAGALGGAQ+A+NQNILQS  MPNDPLTLHLAKLSR+QLTE MSGLKVMATQNKDLARQLLLARPQLS
Subjt:  GLVANAGGPTGHGESSQHQPIGLHIAITAAAVMAGALGGAQSATNQNILQSAAMPNDPLTLHLAKLSRNQLTEVMSGLKVMATQNKDLARQLLLARPQLS

Query:  KALFQSQIMLGMVTPQVLQKPNLRQPSTHPQLPLHDMQQGQPSSLQSQPGLPPLVPNRMQTGFVPKKETQMSLAPQNPLAPHQFSASQRPPLQSQIQPSL
        KALFQSQIMLGMVTPQVLQ PNLRQPSTHPQLPLHD+QQGQ SSLQ QPGLPPL PNRMQTGFVPKKETQ+SL PQNPLAPHQFSASQRPPLQSQIQPSL
Subjt:  KALFQSQIMLGMVTPQVLQKPNLRQPSTHPQLPLHDMQQGQPSSLQSQPGLPPLVPNRMQTGFVPKKETQMSLAPQNPLAPHQFSASQRPPLQSQIQPSL

Query:  ALQGTLTGIPGGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHGEAVIPVHNAQIANPEAKPSLLPRPSLSDSDFQPGPSTAYSASQTVGS
        ALQGTLTGIPGGSLLPS+SLPG++SVRQQVQVP S+SLKQHMRPPSQQYSGHG AVIP HNAQIANPEAKPSLLPRPSL D+DFQPG S AY ASQ VGS
Subjt:  ALQGTLTGIPGGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHGEAVIPVHNAQIANPEAKPSLLPRPSLSDSDFQPGPSTAYSASQTVGS

Query:  DIDKSSQVPLGVDGKRNILHGFSGTTNRPVKQIKLEDGKGSPFSAGGLSASVGTNGSGQLGIASDPNLPGTKISEKPTSMLSRDVESALLQQVLNLTPEQ
        D D+SSQVPLGVDGKR I HGFSGTTNRPVK IKLEDGKGSPFSAGGLSASVG NG+ QLGIASDPNLPG +ISEKPTSML  DVESALLQQVLNLTPEQ
Subjt:  DIDKSSQVPLGVDGKRNILHGFSGTTNRPVKQIKLEDGKGSPFSAGGLSASVGTNGSGQLGIASDPNLPGTKISEKPTSMLSRDVESALLQQVLNLTPEQ

Query:  LNSLPLEQRQQVIELQQALRRDQMRPS
        LNSLPLEQRQQVI+LQQALRRDQMRPS
Subjt:  LNSLPLEQRQQVIELQQALRRDQMRPS

XP_038885247.1 LOW QUALITY PROTEIN: cleavage stimulating factor 64 [Benincasa hispida]

1.3e-258

90.13

Show/hide

Query:  MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGP
        MASSQHRCVFVGNIPYDATEEQLIEICQE GPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGP
Subjt:  MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGP

Query:  GLVANAGGPTGHGESSQHQPIGLHIAITAAAVMAGALGGAQSATNQNILQSAAMPNDPLTLHLAKLSRNQLTEVMSGLKVMATQNKDLARQLLLARPQLS
        GLVANAGGPT  GESSQHQPIGLHIAITAAAVMAG+LGGAQ+A++QN LQSA MPNDPLTLHLAKLSR+QLTEVMSGLK MATQNKDLARQLLLARPQLS
Subjt:  GLVANAGGPTGHGESSQHQPIGLHIAITAAAVMAGALGGAQSATNQNILQSAAMPNDPLTLHLAKLSRNQLTEVMSGLKVMATQNKDLARQLLLARPQLS

Query:  KALFQSQIMLGMVTPQVLQKPNLRQPSTHPQLPLHDMQQGQPSSLQSQPGLPPLVPNRMQTGFVPKKETQMSLAPQNPLAPHQFSASQRPPLQSQIQPSL
        KALFQSQIMLGMVTPQVLQKPNL QPSTH +LPLH++QQGQPSSLQ QPGLPPL PNRMQTGFVPKKETQ+SL PQNPLAPHQFSAS RPPLQSQIQPS 
Subjt:  KALFQSQIMLGMVTPQVLQKPNLRQPSTHPQLPLHDMQQGQPSSLQSQPGLPPLVPNRMQTGFVPKKETQMSLAPQNPLAPHQFSASQRPPLQSQIQPSL

Query:  ALQGTLTGIPGGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHGEAVIPVHNAQIANPEAKPSLLPRPSLSDSDFQPGPSTAYSASQTVGS
        ALQG+LTGIPGGS LPSISL GNISVRQQVQVP SSSLKQHMRPP QQYSGHG A+IP HNA IANPEAKPSLLP PSLSD+DFQPGPSTAY AS  VGS
Subjt:  ALQGTLTGIPGGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHGEAVIPVHNAQIANPEAKPSLLPRPSLSDSDFQPGPSTAYSASQTVGS

Query:  DIDKSSQVPLGVDGKRNILHGFSGTTNRPVKQIKLEDGKGSPFSAGGLSASVGTNGSGQLGIASDPNLPGTKISEKPTSMLSRDVESALLQQVLNLTPEQ
        D+DKSSQVPLGVDGKRN+LHGFSGTTNRPVKQIKLEDGKGSPFSAGGLSAS+GTNGSGQLGI+SDPNL GT+ SEKPTS+L  +VES LLQQVLNLTPEQ
Subjt:  DIDKSSQVPLGVDGKRNILHGFSGTTNRPVKQIKLEDGKGSPFSAGGLSASVGTNGSGQLGIASDPNLPGTKISEKPTSMLSRDVESALLQQVLNLTPEQ

Query:  LNSLPLEQRQQVIELQQALRRDQMRPS
        LN LPLEQR QV+ELQ ALRRDQMRPS
Subjt:  LNSLPLEQRQQVIELQQALRRDQMRPS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KCI7 RRM domain-containing protein

4.1e-258

88.8

Show/hide

Query:  MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGP
        MAS+QHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGP
Subjt:  MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGP

Query:  GLVANAGGPTGHGESSQHQPIGLHIAITAAAVMAGALGGAQSATNQNILQSAAMPNDPLTLHLAKLSRNQLTEVMSGLKVMATQNKDLARQLLLARPQLS
        GLVANAGGPT HGE+SQHQPIGLHIAITAAAVMAGALGGAQ+A+NQN LQSA MPNDPLTLHLAKLSR+QLTEVMSGLK MATQNKDLARQLLLARPQLS
Subjt:  GLVANAGGPTGHGESSQHQPIGLHIAITAAAVMAGALGGAQSATNQNILQSAAMPNDPLTLHLAKLSRNQLTEVMSGLKVMATQNKDLARQLLLARPQLS

Query:  KALFQSQIMLGMVTPQVLQKPNLRQPSTHPQLPLHDMQQGQPSSLQSQPGLPPLVPNRMQTGFVPKKETQMSLAPQNPLAPHQFSASQRPPLQSQIQPSL
        KALFQSQIMLGMVTPQVLQKPNL+Q +THPQLPLH+ QQGQPSSLQ QPGLPPL PNRMQTGFVPKKETQ SL PQNPLAPHQFSASQRP LQSQIQPS 
Subjt:  KALFQSQIMLGMVTPQVLQKPNLRQPSTHPQLPLHDMQQGQPSSLQSQPGLPPLVPNRMQTGFVPKKETQMSLAPQNPLAPHQFSASQRPPLQSQIQPSL

Query:  ALQGTLTGIPGGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHGEAVIPVHNAQIANPEAKPSLLPRPSLSDSDFQPGPSTAYSASQTVGS
         LQG+LTGIPGGS LPSISL GNIS+RQQVQ P+SSSLKQHMRPP QQY GHG A+IP HN  I NPEAKPSLLP PSLSD+DFQPGPSTAYS  Q VGS
Subjt:  ALQGTLTGIPGGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHGEAVIPVHNAQIANPEAKPSLLPRPSLSDSDFQPGPSTAYSASQTVGS

Query:  DIDKSSQVPLGVDGKRNILHGFSGTTNRPVKQIKLEDGKGSPFSAGGLSASVGTNGSGQLGIASDPNLPGTKISEKPTSMLSRDVESALLQQVLNLTPEQ
        D+DKSS VPLGVDGKR +LHGFSGTTNRPVKQIKLEDGKGS F AGGLS S+GTNGSGQLGIASDPN+ GT++SEKPTS+L ++VES LLQQVLNLTPEQ
Subjt:  DIDKSSQVPLGVDGKRNILHGFSGTTNRPVKQIKLEDGKGSPFSAGGLSASVGTNGSGQLGIASDPNLPGTKISEKPTSMLSRDVESALLQQVLNLTPEQ

Query:  LNSLPLEQRQQVIELQQALRRDQMRPS
        LNSLPLEQR QVIELQ ALRRDQMRPS
Subjt:  LNSLPLEQRQQVIELQQALRRDQMRPS

A0A1S3C3F6 cleavage stimulating factor 64

8.2e-259

88.61

Show/hide

Query:  MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGP
        MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGP
Subjt:  MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGP

Query:  GLVANAGGPTGHGESSQHQPIGLHIAITAAAVMAGALGGAQSATNQNILQSAAMPNDPLTLHLAKLSRNQLTEVMSGLKVMATQNKDLARQLLLARPQLS
        GLVANAGGPT HG+SSQHQPIGLHIAITAAAVMAGALGGAQ+A+NQN LQSA MPNDPLTLHLAKLSR+QLTEVMSGLK MATQNKDLARQLLLARPQLS
Subjt:  GLVANAGGPTGHGESSQHQPIGLHIAITAAAVMAGALGGAQSATNQNILQSAAMPNDPLTLHLAKLSRNQLTEVMSGLKVMATQNKDLARQLLLARPQLS

Query:  KALFQSQIMLGMVTPQVLQKPNLRQPSTHPQLPLHDMQQGQPSSLQSQPGLPPLVPNRMQTGFVPKKETQMSLAPQNPLAPHQFSASQRPPLQSQIQPSL
        KALFQSQIMLGMVTPQVLQKPNL+Q +THPQLPLH++QQGQPSS+Q QPGLPPL PNRMQTGF+PKKETQ+SL PQNPLAPHQFSAS RP LQSQIQPS 
Subjt:  KALFQSQIMLGMVTPQVLQKPNLRQPSTHPQLPLHDMQQGQPSSLQSQPGLPPLVPNRMQTGFVPKKETQMSLAPQNPLAPHQFSASQRPPLQSQIQPSL

Query:  ALQGTLTGIPGGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHGEAVIPVHNAQIANPEAKPSLLPRPSLSDSDFQPGPSTAYSASQTVGS
         LQG LTGIPGGS LPSI+L GNIS+RQQVQ P SSSLKQHMRPP QQY GHG A+IP HNA I NPEAKPSLLP PS+SD DFQPGPSTAYS  Q VGS
Subjt:  ALQGTLTGIPGGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHGEAVIPVHNAQIANPEAKPSLLPRPSLSDSDFQPGPSTAYSASQTVGS

Query:  DIDKSSQVPLGVDGKRNILHGFSGTTNRPVKQIKLEDGKGSPFSAGGLSASVGTNGSGQLGIASDPNLPGTKISEKPTSMLSRDVESALLQQVLNLTPEQ
        D+DKSS VPLGVDGKR +LHGFSGTTNRPVKQIKLEDGKGSPFSAGGLS S+GTNGSGQLGIASDPN+ GT++SEKPTS+L ++VES LLQQVLNLTPEQ
Subjt:  DIDKSSQVPLGVDGKRNILHGFSGTTNRPVKQIKLEDGKGSPFSAGGLSASVGTNGSGQLGIASDPNLPGTKISEKPTSMLSRDVESALLQQVLNLTPEQ

Query:  LNSLPLEQRQQVIELQQALRRDQMRPS
        LNSLPLEQR QVIELQ ALRRDQMRPS
Subjt:  LNSLPLEQRQQVIELQQALRRDQMRPS

A0A5D3BZN4 Cleavage stimulating factor 64

8.2e-259

88.61

Show/hide

Query:  MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGP
        MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGP
Subjt:  MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGP

Query:  GLVANAGGPTGHGESSQHQPIGLHIAITAAAVMAGALGGAQSATNQNILQSAAMPNDPLTLHLAKLSRNQLTEVMSGLKVMATQNKDLARQLLLARPQLS
        GLVANAGGPT HG+SSQHQPIGLHIAITAAAVMAGALGGAQ+A+NQN LQSA MPNDPLTLHLAKLSR+QLTEVMSGLK MATQNKDLARQLLLARPQLS
Subjt:  GLVANAGGPTGHGESSQHQPIGLHIAITAAAVMAGALGGAQSATNQNILQSAAMPNDPLTLHLAKLSRNQLTEVMSGLKVMATQNKDLARQLLLARPQLS

Query:  KALFQSQIMLGMVTPQVLQKPNLRQPSTHPQLPLHDMQQGQPSSLQSQPGLPPLVPNRMQTGFVPKKETQMSLAPQNPLAPHQFSASQRPPLQSQIQPSL
        KALFQSQIMLGMVTPQVLQKPNL+Q +THPQLPLH++QQGQPSS+Q QPGLPPL PNRMQTGF+PKKETQ+SL PQNPLAPHQFSAS RP LQSQIQPS 
Subjt:  KALFQSQIMLGMVTPQVLQKPNLRQPSTHPQLPLHDMQQGQPSSLQSQPGLPPLVPNRMQTGFVPKKETQMSLAPQNPLAPHQFSASQRPPLQSQIQPSL

Query:  ALQGTLTGIPGGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHGEAVIPVHNAQIANPEAKPSLLPRPSLSDSDFQPGPSTAYSASQTVGS
         LQG LTGIPGGS LPSI+L GNIS+RQQVQ P SSSLKQHMRPP QQY GHG A+IP HNA I NPEAKPSLLP PS+SD DFQPGPSTAYS  Q VGS
Subjt:  ALQGTLTGIPGGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHGEAVIPVHNAQIANPEAKPSLLPRPSLSDSDFQPGPSTAYSASQTVGS

Query:  DIDKSSQVPLGVDGKRNILHGFSGTTNRPVKQIKLEDGKGSPFSAGGLSASVGTNGSGQLGIASDPNLPGTKISEKPTSMLSRDVESALLQQVLNLTPEQ
        D+DKSS VPLGVDGKR +LHGFSGTTNRPVKQIKLEDGKGSPFSAGGLS S+GTNGSGQLGIASDPN+ GT++SEKPTS+L ++VES LLQQVLNLTPEQ
Subjt:  DIDKSSQVPLGVDGKRNILHGFSGTTNRPVKQIKLEDGKGSPFSAGGLSASVGTNGSGQLGIASDPNLPGTKISEKPTSMLSRDVESALLQQVLNLTPEQ

Query:  LNSLPLEQRQQVIELQQALRRDQMRPS
        LNSLPLEQR QVIELQ ALRRDQMRPS
Subjt:  LNSLPLEQRQQVIELQQALRRDQMRPS

A0A6J1HJJ0 cleavage stimulating factor 64

2.0e-265

91.65

Show/hide

Query:  MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGP
        MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGP
Subjt:  MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGP

Query:  GLVANAGGPTGHGESSQHQPIGLHIAITAAAVMAGALGGAQSATNQNILQSAAMPNDPLTLHLAKLSRNQLTEVMSGLKVMATQNKDLARQLLLARPQLS
        GLV NAGGPT HGESSQ QPIGLHIAITAAAVMAGALGGAQ+A+NQNILQS  MPNDPLTLHLAKLSR+QLTEVMSGLKVMATQNKDLARQLLLARPQLS
Subjt:  GLVANAGGPTGHGESSQHQPIGLHIAITAAAVMAGALGGAQSATNQNILQSAAMPNDPLTLHLAKLSRNQLTEVMSGLKVMATQNKDLARQLLLARPQLS

Query:  KALFQSQIMLGMVTPQVLQKPNLRQPSTHPQLPLHDMQQGQPSSLQSQPGLPPLVPNRMQTGFVPKKETQMSLAPQNPLAPHQFSASQRPPLQSQIQPSL
        KALFQSQIMLGMVTPQVLQ PNLRQPSTHPQLPLHD+QQGQ SSLQ QPGLPPL PNRMQTGFVPKKETQ+S+ PQNPLAPHQFSASQRPPLQSQIQP+L
Subjt:  KALFQSQIMLGMVTPQVLQKPNLRQPSTHPQLPLHDMQQGQPSSLQSQPGLPPLVPNRMQTGFVPKKETQMSLAPQNPLAPHQFSASQRPPLQSQIQPSL

Query:  ALQGTLTGIPGGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHGEAVIPVHNAQIANPEAKPSLLPRPSLSDSDFQPGPSTAYSASQTVGS
        AL GTLTGIPGGSLLPS+SLPG++SVRQQVQVP S+SLKQHMRPPSQQYSGHG AVIP HNAQIANPEAKPSLLPRPSL D+DFQPG S AY ASQ VGS
Subjt:  ALQGTLTGIPGGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHGEAVIPVHNAQIANPEAKPSLLPRPSLSDSDFQPGPSTAYSASQTVGS

Query:  DIDKSSQVPLGVDGKRNILHGFSGTTNRPVKQIKLEDGKGSPFSAGGLSASVGTNGSGQLGIASDPNLPGTKISEKPTSMLSRDVESALLQQVLNLTPEQ
        D DKSSQV LGVDGKR I HGFSGTTNRPVKQIKLEDGKGSPFS GGLSASVG NG+ QLGIASDPNLPG +ISEKPTSML  DVESALLQQVLNLTPEQ
Subjt:  DIDKSSQVPLGVDGKRNILHGFSGTTNRPVKQIKLEDGKGSPFSAGGLSASVGTNGSGQLGIASDPNLPGTKISEKPTSMLSRDVESALLQQVLNLTPEQ

Query:  LNSLPLEQRQQVIELQQALRRDQMRPS
        LNSLPLEQRQQVI+LQQALRRDQMRPS
Subjt:  LNSLPLEQRQQVIELQQALRRDQMRPS

A0A6J1JSX2 cleavage stimulating factor 64

2.0e-265

91.84

Show/hide

Query:  MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGP
        MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGP
Subjt:  MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGP

Query:  GLVANAGGPTGHGESSQHQPIGLHIAITAAAVMAGALGGAQSATNQNILQSAAMPNDPLTLHLAKLSRNQLTEVMSGLKVMATQNKDLARQLLLARPQLS
        GLV NAGGPT HGESSQ QPIGLHIAITAAAVMAGALGGAQ+A+NQNILQS  MPNDPLTLHLAKLSR+QLTE +SGLKVMATQNKDLARQLLLARPQLS
Subjt:  GLVANAGGPTGHGESSQHQPIGLHIAITAAAVMAGALGGAQSATNQNILQSAAMPNDPLTLHLAKLSRNQLTEVMSGLKVMATQNKDLARQLLLARPQLS

Query:  KALFQSQIMLGMVTPQVLQKPNLRQPSTHPQLPLHDMQQGQPSSLQSQPGLPPLVPNRMQTGFVPKKETQMSLAPQNPLAPHQFSASQRPPLQSQIQPSL
        KALFQSQIMLGMVTPQVLQ PNLRQPSTHPQLPLHD+QQGQ SSLQ QPGLPPL PNRMQTGFVPKKETQ+S  PQNPLAPHQFSASQR PLQSQIQPSL
Subjt:  KALFQSQIMLGMVTPQVLQKPNLRQPSTHPQLPLHDMQQGQPSSLQSQPGLPPLVPNRMQTGFVPKKETQMSLAPQNPLAPHQFSASQRPPLQSQIQPSL

Query:  ALQGTLTGIPGGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHGEAVIPVHNAQIANPEAKPSLLPRPSLSDSDFQPGPSTAYSASQTVGS
        ALQGTLTGIPGGSLLPS+SLPG++SVRQQVQVP S+SLKQHMRPPSQQYSGHGEAVIP HNAQIANPEAKPSLLPRPSL D+DFQPG S AY ASQ VGS
Subjt:  ALQGTLTGIPGGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHGEAVIPVHNAQIANPEAKPSLLPRPSLSDSDFQPGPSTAYSASQTVGS

Query:  DIDKSSQVPLGVDGKRNILHGFSGTTNRPVKQIKLEDGKGSPFSAGGLSASVGTNGSGQLGIASDPNLPGTKISEKPTSMLSRDVESALLQQVLNLTPEQ
        D DKSSQV LGVDGKR I HGFSGTTNRPVKQIKLEDGKGSPFSAGGLSASVG NG+ QLGIASDPNLPG +ISEKPTSML  DVESALLQQVLNLTPEQ
Subjt:  DIDKSSQVPLGVDGKRNILHGFSGTTNRPVKQIKLEDGKGSPFSAGGLSASVGTNGSGQLGIASDPNLPGTKISEKPTSMLSRDVESALLQQVLNLTPEQ

Query:  LNSLPLEQRQQVIELQQALRRDQMRPS
        LNSLPLEQRQQVI+LQQALRRDQMRPS
Subjt:  LNSLPLEQRQQVIELQQALRRDQMRPS

SwissProt top hits

e value

%identity

Alignment

P33240 Cleavage stimulation factor subunit 2

4.2e-34

32.41

Show/hide

Query:  RCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANA
        R VFVGNIPY+ATEEQL +I  EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA RNL G E +GR LRVD A ++K  +  +  G G P + +  
Subjt:  RCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANA

Query:  GGPTGHGESSQHQPIGLHIAITAAAVMAGALGGAQSATNQNILQSAAMPNDPLTLHLAKLSRNQLTEVMSGLKVMATQNKDLARQLLLARPQLSKALFQS
          P G   S +  P  +  A+                                    A L   Q+ E+M  +K+    +   AR +LL  PQL+ AL Q+
Subjt:  GGPTGHGESSQHQPIGLHIAITAAAVMAGALGGAQSATNQNILQSAAMPNDPLTLHLAKLSRNQLTEVMSGLKVMATQNKDLARQLLLARPQLSKALFQS

Query:  QIMLGMVTPQVLQKPNLRQPST------HPQLPLH----------DMQQGQPSSLQSQP-------GLPPLVPNRMQTGFVPKKETQMSLAPQNP--LAP
        Q+++ +V P++  K   RQ +       +PQ P+H           M Q  P + Q+Q        G PPL+   MQ G     +   ++    P  LAP
Subjt:  QIMLGMVTPQVLQKPNLRQPST------HPQLPLH----------DMQQGQPSSLQSQP-------GLPPLVPNRMQTGFVPKKETQMSLAPQNP--LAP

Query:  --------------------------HQFSASQRPPLQSQIQPSLALQGTLTGIPGGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHGEA
                                     +A QR  L + +     L G     P G  L  +S+ G +  R  +  P       H  PP     GH   
Subjt:  --------------------------HQFSASQRPPLQSQIQPSLALQGTLTGIPGGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHGEA

Query:  VIPVHNAQIAN-PEAKPSLL-PRPSLSDSDFQPGP
          P H  +    PE +P +  PR  + D   Q GP
Subjt:  VIPVHNAQIAN-PEAKPSLL-PRPSLSDSDFQPGP

Q5RDA3 Cleavage stimulation factor subunit 2

3.2e-34

32.87

Show/hide

Query:  RCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANA
        R VFVGNIPY+ATEEQL +I  EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA RNL G E +GR LRVD A ++K  +  +  G G P + +  
Subjt:  RCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANA

Query:  GGPTGHGESSQHQPIGLHIAITAAAVMAGALGGAQSATNQNILQSAAMPNDPLTLHLAKLSRNQLTEVMSGLKVMATQNKDLARQLLLARPQLSKALFQS
          P G   S +  P  +  A+                                    A L   Q+ E+M  +K+    +   AR +LL  PQL+ AL Q+
Subjt:  GGPTGHGESSQHQPIGLHIAITAAAVMAGALGGAQSATNQNILQSAAMPNDPLTLHLAKLSRNQLTEVMSGLKVMATQNKDLARQLLLARPQLSKALFQS

Query:  QIMLGMVTPQVLQKPNLRQPST------HPQLPLH----------DMQQGQPSSLQSQP-------GLPPLVPNRMQTGF-----VPKKET---------
        Q+++ +V P++  K   RQ +       +PQ P+H           M Q  P + Q+Q        G PPL+   MQ G      +P   T         
Subjt:  QIMLGMVTPQVLQKPNLRQPST------HPQLPLH----------DMQQGQPSSLQSQP-------GLPPLVPNRMQTGF-----VPKKET---------

Query:  ------QMSLAPQNPLA------PHQ--FSASQRPPLQSQIQPSLALQGTLTGIPGGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHGEA
              Q+ +    P++      P Q   +A QR  L + +     L G     P G  L  +S+ G +  R  +  P       H  PP     GH   
Subjt:  ------QMSLAPQNPLA------PHQ--FSASQRPPLQSQIQPSLALQGTLTGIPGGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHGEA

Query:  VIPVHNAQIAN-PEAKPSLL-PRPSLSDSDFQPGP
          P H  +    PE +P +  PR  + D   Q GP
Subjt:  VIPVHNAQIAN-PEAKPSLL-PRPSLSDSDFQPGP

Q8BIQ5 Cleavage stimulation factor subunit 2

1.2e-33

33.11

Show/hide

Query:  RCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANA
        R VFVGNIPY+ATEEQL +I  EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA RNL G E +GR LRVD A ++K  +  +  G G P + +  
Subjt:  RCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANA

Query:  GGPTGHGESSQHQPIGLHIAITAAAVMAGALGGAQSATNQNILQSAAMPNDPLTLHLAKLSRNQLTEVMSGLKVMATQNKDLARQLLLARPQLSKALFQS
          P G   S +  P  +  A+                                    A L   Q+ E+M  +K+    +   AR +LL  PQL+ AL Q+
Subjt:  GGPTGHGESSQHQPIGLHIAITAAAVMAGALGGAQSATNQNILQSAAMPNDPLTLHLAKLSRNQLTEVMSGLKVMATQNKDLARQLLLARPQLSKALFQS

Query:  QIMLGMVTPQVLQKPNLRQP------STHPQLPLH----------DMQQGQPSSLQSQP-------GLPPLVPNRMQTGFVPKKETQMSLAPQNP----L
        Q+++ +V P++  K   RQ       S +PQ P+H           M Q  P + Q+Q        G PP++   M  G VP    QM+ A   P    L
Subjt:  QIMLGMVTPQVLQKPNLRQP------STHPQLPLH----------DMQQGQPSSLQSQP-------GLPPLVPNRMQTGFVPKKETQMSLAPQNP----L

Query:  AP--------------------------HQFSASQRPPLQSQIQPSLALQGTLTGIPGGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHG
        AP                             +A QR  L + +     L G     P G  L +++  G++  R  +  P       H  PP     GH 
Subjt:  AP--------------------------HQFSASQRPPLQSQIQPSLALQGTLTGIPGGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHG

Query:  EAVIPVHNAQIANPEAKPSLL---PRPSLSDSDFQPGP
            P H+ +   P A+P  L   PR  + D   Q GP
Subjt:  EAVIPVHNAQIANPEAKPSLL---PRPSLSDSDFQPGP

Q8HXM1 Cleavage stimulation factor subunit 2

1.3e-35

28.43

Show/hide

Query:  RCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANA
        R VFVGNIPY+ATEEQL +I  EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA RNL G E +GR LRVD A ++K  +  +  G G P + +  
Subjt:  RCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANA

Query:  GGPTGHGESSQHQPIGLHIAITAAAVMAGALGGAQSATNQNILQSAAMPNDPLTLHLAKLSRNQLTEVMSGLKVMATQNKDLARQLLLARPQLSKALFQS
          P G   S +  P  +  A+                                    A L   Q+ E+M  +K+    +   AR +LL  PQL+ AL Q+
Subjt:  GGPTGHGESSQHQPIGLHIAITAAAVMAGALGGAQSATNQNILQSAAMPNDPLTLHLAKLSRNQLTEVMSGLKVMATQNKDLARQLLLARPQLSKALFQS

Query:  QIMLGMVTPQVLQKPNLRQPST------HPQLPLH----------DMQQGQPSSLQSQP-------GLPPLVPNRMQTGFVPKKETQMSLAPQNP--LAP
        Q+++ +V P++  K   RQ +       +PQ  +H           M Q  P + Q+Q        G PPL+   +Q G     +   ++    P  LAP
Subjt:  QIMLGMVTPQVLQKPNLRQPST------HPQLPLH----------DMQQGQPSSLQSQP-------GLPPLVPNRMQTGFVPKKETQMSLAPQNP--LAP

Query:  --------------------------HQFSASQRPPLQSQIQPSLALQGTLTGIPGGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHGEA
                                     +A QR PL + +     L G     P G  L  +S+ G +  R  +  P       H  PP     GH   
Subjt:  --------------------------HQFSASQRPPLQSQIQPSLALQGTLTGIPGGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHGEA

Query:  VIPVHNAQIANPEAKPSLLPRPSLSDSDFQPGPSTAYSASQTVGSDIDKSSQVPLGVDGKRNILHGFS--GTTNRPVKQIKLE-----------------
          P H  +       P   PRP +++     GP          G    +  + P G+D +     G    G   R ++   +E                 
Subjt:  VIPVHNAQIANPEAKPSLLPRPSLSDSDFQPGPSTAYSASQTVGSDIDKSSQVPLGVDGKRNILHGFS--GTTNRPVKQIKLE-----------------

Query:  -------------DGKGSPFSAG--GLS----ASVGTNGSGQLGIASDPNLPGTKI---------SEKPTSMLSRDVE-SALLQQVLNLTPEQLNSLPLE
                      G   P  +G  G S     +VG  GS Q+ +     + G  I         S     +  +D E +AL+ QVL LT +Q+  LP E
Subjt:  -------------DGKGSPFSAG--GLS----ASVGTNGSGQLGIASDPNLPGTKI---------SEKPTSMLSRDVE-SALLQQVLNLTPEQLNSLPLE

Query:  QRQQVIELQQALRRDQMRP
        QRQ ++ L++ +++    P
Subjt:  QRQQVIELQQALRRDQMRP

Q9M9G6 Cleavage stimulating factor 64

4.6e-97

Show/hide

Query:  ASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPG
        +SSQ RCVFVGNIPYDATEEQL EIC EVGPVVSFRLV DRETGKPKGYGFCEYKDEETALSARRNLQ YEINGRQLRVDFAENDKG D+ R+Q +GGPG
Subjt:  ASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPG

Query:  LVANA---------GGPTGHGESSQHQPIGLHIAITAAAVMAGALGGAQ--SATNQNILQSAAMPNDPLTLHLAKLSRNQLTEVMSGLKVMATQNKDLAR
        L +           GGP    +S+ HQP+GLH+A TAA+V+AGALGG Q  S   Q+ LQ  A  +DPL LHLAK+SR+QLTE++S +K+MATQNK+ AR
Subjt:  LVANA---------GGPTGHGESSQHQPIGLHIAITAAAVMAGALGGAQ--SATNQNILQSAAMPNDPLTLHLAKLSRNQLTEVMSGLKVMATQNKDLAR

Query:  QLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLRQPSTHPQLPLHDMQQGQPSSLQSQPGLPPLVPNRMQTGFVPKKETQMSLAPQNPLAPHQFSASQRP
        QLL++RPQL KA+F +Q+MLG+V+PQVLQ PN+ Q  +H  +    +Q  Q   L  Q  LPPL           ++  Q+S AP           SQ P
Subjt:  QLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLRQPSTHPQLPLHDMQQGQPSSLQSQPGLPPLVPNRMQTGFVPKKETQMSLAPQNPLAPHQFSASQRP

Query:  PLQSQIQPSLALQGTLTGIPGGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHGEAVIPVHNAQIANPEAKPSLLPRPSLSDSDFQPGPST
          QS  QP   +   L   PG S +       N   R QV+V  +   +Q + P S       +  +P       N   +PS +P  +L +S  Q G   
Subjt:  PLQSQIQPSLALQGTLTGIPGGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHGEAVIPVHNAQIANPEAKPSLLPRPSLSDSDFQPGPST

Query:  AYSASQTVGSDIDKSSQVPLGVDGKRNILHGFSGTTNRPVKQIKLEDGKGSPFSAGGLSASVGTNGSGQLGIASDPNLPGTKISEKPTSMLSRDVESALL
             QTV  +            GKR        + NRP K +K+ED + +    G +S S+               LP    ++ P + +S DV+S LL
Subjt:  AYSASQTVGSDIDKSSQVPLGVDGKRNILHGFSGTTNRPVKQIKLEDGKGSPFSAGGLSASVGTNGSGQLGIASDPNLPGTKISEKPTSMLSRDVESALL

Query:  QQVLNLTPEQLNSLPLEQRQQVIELQQALRRDQM
        QQV+NLTPEQL  L  EQ+Q+V++LQQAL++D M
Subjt:  QQVLNLTPEQLNSLPLEQRQQVIELQQALRRDQM

Arabidopsis top hits

e value

%identity

Alignment

AT1G60000.1 RNA-binding (RRM/RBD/RNP motifs) family protein

3.9e-11

38.1

Show/hide

Query:  SQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDK
        ++H+ +FVGN+ +  T E L    +E G VV  R+V D +TG+ +GYGF  Y  +    +A  +L G+E+ GR +RV+ A+  K
Subjt:  SQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDK

AT1G71800.1 cleavage stimulating factor 64

3.2e-98

Show/hide

Query:  ASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPG
        +SSQ RCVFVGNIPYDATEEQL EIC EVGPVVSFRLV DRETGKPKGYGFCEYKDEETALSARRNLQ YEINGRQLRVDFAENDKG D+ R+Q +GGPG
Subjt:  ASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPG

Query:  LVANA---------GGPTGHGESSQHQPIGLHIAITAAAVMAGALGGAQ--SATNQNILQSAAMPNDPLTLHLAKLSRNQLTEVMSGLKVMATQNKDLAR
        L +           GGP    +S+ HQP+GLH+A TAA+V+AGALGG Q  S   Q+ LQ  A  +DPL LHLAK+SR+QLTE++S +K+MATQNK+ AR
Subjt:  LVANA---------GGPTGHGESSQHQPIGLHIAITAAAVMAGALGGAQ--SATNQNILQSAAMPNDPLTLHLAKLSRNQLTEVMSGLKVMATQNKDLAR

Query:  QLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLRQPSTHPQLPLHDMQQGQPSSLQSQPGLPPLVPNRMQTGFVPKKETQMSLAPQNPLAPHQFSASQRP
        QLL++RPQL KA+F +Q+MLG+V+PQVLQ PN+ Q  +H  +    +Q  Q   L  Q  LPPL           ++  Q+S AP           SQ P
Subjt:  QLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLRQPSTHPQLPLHDMQQGQPSSLQSQPGLPPLVPNRMQTGFVPKKETQMSLAPQNPLAPHQFSASQRP

Query:  PLQSQIQPSLALQGTLTGIPGGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHGEAVIPVHNAQIANPEAKPSLLPRPSLSDSDFQPGPST
          QS  QP   +   L   PG S +       N   R QV+V  +   +Q + P S       +  +P       N   +PS +P  +L +S  Q G   
Subjt:  PLQSQIQPSLALQGTLTGIPGGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHGEAVIPVHNAQIANPEAKPSLLPRPSLSDSDFQPGPST

Query:  AYSASQTVGSDIDKSSQVPLGVDGKRNILHGFSGTTNRPVKQIKLEDGKGSPFSAGGLSASVGTNGSGQLGIASDPNLPGTKISEKPTSMLSRDVESALL
             QTV  +            GKR        + NRP K +K+ED + +    G +S S+               LP    ++ P + +S DV+S LL
Subjt:  AYSASQTVGSDIDKSSQVPLGVDGKRNILHGFSGTTNRPVKQIKLEDGKGSPFSAGGLSASVGTNGSGQLGIASDPNLPGTKISEKPTSMLSRDVESALL

Query:  QQVLNLTPEQLNSLPLEQRQQVIELQQALRRDQM
        QQV+NLTPEQL  L  EQ+Q+V++LQQAL++D M
Subjt:  QQVLNLTPEQLNSLPLEQRQQVIELQQALRRDQM

AT1G73840.1 hydroxyproline-rich glycoprotein family protein

1.3e-14

29.07

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Query:  LTLHLAKLSRNQLTEVMSGLKVMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLRQPSTHPQLPLHDMQQGQPS--SLQSQPGLPPLVP
        L  +LA ++++QL ++MS +K +  QN   AR++L+  P L+KALFQ+QIMLGMV P          P   P++    +QQ Q S  S+  +P +   + 
Subjt:  LTLHLAKLSRNQLTEVMSGLKVMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLRQPSTHPQLPLHDMQQGQPS--SLQSQPGLPPLVP

Query:  NRMQTGFVPKKETQMSLAPQNPLAPHQF-SASQRPPLQSQIQPSLALQGTLTGIP--GGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHG
        +    G V   E   ++ PQ P+  H        PP    +  + A        P   G L P+++   ++S  Q  QV  +     H  P SQQ   H 
Subjt:  NRMQTGFVPKKETQMSLAPQNPLAPHQF-SASQRPPLQSQIQPSLALQGTLTGIP--GGSLLPSISLPGNISVRQQVQVPASSSLKQHMRPPSQQYSGHG

Query:  EAVIPVHNAQIANPEAKPSLLPRPSLSDS--------DFQPGPSTAYSASQTVGSDIDKSSQVPLGVDGKRNILHG----------------------FS
           IP  + Q+          P  +   S          Q GP+T +   Q  G+     SQ P+   G R    G                      + 
Subjt:  EAVIPVHNAQIANPEAKPSLLPRPSLSDS--------DFQPGPSTAYSASQTVGSDIDKSSQVPLGVDGKRNILHG----------------------FS

Query:  GTTNRPVKQIKLEDGKGSPFSAGGLSASVGTNGSGQLGIASDPNLPGTKISEKP-TSMLSRDVESALLQQVLNLTPEQLNSLPLEQRQQVIELQQALRR
        G  N       +   +G  + AG   +S  T+  G LG    P+  G      P  + +S ++E ALLQQV++LTPEQ+N LP EQR QV++LQQ LR+
Subjt:  GTTNRPVKQIKLEDGKGSPFSAGGLSASVGTNGSGQLGIASDPNLPGTKISEKP-TSMLSRDVESALLQQVLNLTPEQLNSLPLEQRQQVIELQQALRR

AT3G47120.1 RNA recognition motif (RRM)-containing protein

6.7e-11

33.67

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Query:  VFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVD----FAENDKGADRNREQGRGGPGL
        V+VG IP+D TE  L+ +  + G +V   L+ D+ TGK KG+ F  Y+D+ + + A  NL G  + GR ++VD    + ++++  +  R Q R   G+
Subjt:  VFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVD----FAENDKGADRNREQGRGGPGL

AT5G61030.1 glycine-rich RNA-binding protein 3

6.1e-12

36.28

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Query:  MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGP
        M+SS+   +F+G + Y   E+ L E   + G VV  R+++DRETG+ +G+GF  +   E A SA + L G +++GR ++V++A      DR    G GG 
Subjt:  MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGP

Query:  GLVANAGGPTGHG
        G     GG  G G
Subjt:  GLVANAGGPTGHG

Sequences

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CDS sequence

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ATGGCCTCCTCTCAGCACCGCTGTGTTTTCGTTGGGAATATACCGTATGATGCTACTGAAGAGCAGCTTATAGAAATCTGCCAAGAAGTTGGACCCGTAGTGTCGTTCAG
ATTAGTTATTGACAGAGAAACTGGAAAACCAAAAGGCTACGGGTTTTGTGAGTATAAGGATGAAGAAACAGCTTTGAGTGCTCGCCGCAATCTTCAAGGTTATGAAATTA
ATGGCCGTCAGTTACGAGTTGATTTTGCTGAGAATGACAAGGGTGCAGACAGAAATAGAGAACAGGGTCGTGGTGGACCTGGATTGGTTGCAAATGCTGGCGGCCCAACA
GGCCATGGGGAATCCAGTCAACATCAACCAATTGGTCTTCATATAGCTATAACTGCTGCAGCCGTCATGGCAGGAGCCCTTGGTGGTGCACAATCCGCTACTAATCAGAA
TATTTTGCAGAGTGCAGCAATGCCCAATGATCCTCTAACTCTACATCTGGCTAAACTTTCTAGGAATCAGCTCACTGAAGTTATGTCAGGGCTAAAGGTAATGGCTACAC
AAAACAAGGATTTGGCTCGTCAGCTATTGCTGGCAAGACCACAATTGTCAAAAGCTCTTTTTCAGTCACAGATAATGCTTGGAATGGTCACTCCACAAGTGTTGCAGAAG
CCTAATTTACGACAACCTTCTACTCATCCTCAGCTTCCTTTGCATGACATGCAGCAGGGTCAACCATCATCTCTTCAAAGTCAACCAGGGCTGCCCCCTCTTGTACCTAA
CAGGATGCAGACTGGTTTTGTACCTAAAAAAGAAACCCAAATGTCTCTGGCGCCTCAAAATCCTTTGGCTCCCCATCAGTTTTCTGCATCCCAACGGCCTCCACTTCAGT
CTCAAATTCAGCCATCACTTGCTTTACAAGGCACTTTGACTGGAATCCCAGGAGGCTCGTTGCTTCCTTCCATAAGTTTGCCGGGAAATATATCTGTTAGGCAACAGGTT
CAGGTGCCTGCCTCCTCTTCTTTAAAGCAGCACATGCGTCCCCCTTCTCAACAATATTCAGGGCATGGTGAAGCTGTAATTCCAGTACATAATGCTCAGATTGCTAATCC
AGAAGCTAAACCTTCTCTTTTGCCTCGCCCTTCCTTATCAGATTCTGACTTTCAGCCTGGCCCCTCCACAGCGTATAGTGCATCTCAGACAGTGGGCAGTGATATTGATA
AGTCTTCTCAAGTTCCTCTTGGTGTAGATGGTAAAAGAAATATACTTCATGGCTTTTCAGGAACAACTAATCGCCCTGTAAAGCAGATAAAATTAGAGGATGGAAAAGGC
AGCCCTTTCTCAGCCGGAGGTCTAAGTGCATCAGTAGGTACCAACGGATCTGGACAACTTGGAATTGCCTCAGATCCCAATCTCCCAGGGACAAAAATCTCTGAGAAACC
AACTTCAATGCTTTCCCGCGACGTCGAATCTGCACTACTGCAACAAGTTTTGAATCTAACTCCCGAACAGCTAAACTCGTTGCCGCTCGAACAGAGGCAGCAAGTTATTG
AGCTCCAGCAAGCACTTCGCAGAGATCAAATGCGGCCATCCTAG

mRNA sequence

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AAAAAAAGACGAAGAAATATAAACACTTACAGAAAGGGGGGCGACCTCTGGAATTAAATCTGCCTTGGAACAGGATCTTCTCGGAACGTTTCATTCTTCTTCGCCGTCCC
CATTGTGTTTGTTCGGAATCTTCAAAATCTCATTCGATTTCTTTAGAAATCTTTGCTCTTGAAGACAAAACTTCGCTCACTTACGAACTCAATTGATCTGCGTTCCATTT
GCGGAGCTTCTGTGCAGTTTTGAGCTGCAGAGCATCAGTGGGAGCCGGATAAGTTTGAAAAGTATGCTGAGGAGGAAGAAGATGAAGCATTGCTTCAGCTTCATCTTCTT
CTTCTGTTGATTAATGGCCTCCTCTCAGCACCGCTGTGTTTTCGTTGGGAATATACCGTATGATGCTACTGAAGAGCAGCTTATAGAAATCTGCCAAGAAGTTGGACCCG
TAGTGTCGTTCAGATTAGTTATTGACAGAGAAACTGGAAAACCAAAAGGCTACGGGTTTTGTGAGTATAAGGATGAAGAAACAGCTTTGAGTGCTCGCCGCAATCTTCAA
GGTTATGAAATTAATGGCCGTCAGTTACGAGTTGATTTTGCTGAGAATGACAAGGGTGCAGACAGAAATAGAGAACAGGGTCGTGGTGGACCTGGATTGGTTGCAAATGC
TGGCGGCCCAACAGGCCATGGGGAATCCAGTCAACATCAACCAATTGGTCTTCATATAGCTATAACTGCTGCAGCCGTCATGGCAGGAGCCCTTGGTGGTGCACAATCCG
CTACTAATCAGAATATTTTGCAGAGTGCAGCAATGCCCAATGATCCTCTAACTCTACATCTGGCTAAACTTTCTAGGAATCAGCTCACTGAAGTTATGTCAGGGCTAAAG
GTAATGGCTACACAAAACAAGGATTTGGCTCGTCAGCTATTGCTGGCAAGACCACAATTGTCAAAAGCTCTTTTTCAGTCACAGATAATGCTTGGAATGGTCACTCCACA
AGTGTTGCAGAAGCCTAATTTACGACAACCTTCTACTCATCCTCAGCTTCCTTTGCATGACATGCAGCAGGGTCAACCATCATCTCTTCAAAGTCAACCAGGGCTGCCCC
CTCTTGTACCTAACAGGATGCAGACTGGTTTTGTACCTAAAAAAGAAACCCAAATGTCTCTGGCGCCTCAAAATCCTTTGGCTCCCCATCAGTTTTCTGCATCCCAACGG
CCTCCACTTCAGTCTCAAATTCAGCCATCACTTGCTTTACAAGGCACTTTGACTGGAATCCCAGGAGGCTCGTTGCTTCCTTCCATAAGTTTGCCGGGAAATATATCTGT
TAGGCAACAGGTTCAGGTGCCTGCCTCCTCTTCTTTAAAGCAGCACATGCGTCCCCCTTCTCAACAATATTCAGGGCATGGTGAAGCTGTAATTCCAGTACATAATGCTC
AGATTGCTAATCCAGAAGCTAAACCTTCTCTTTTGCCTCGCCCTTCCTTATCAGATTCTGACTTTCAGCCTGGCCCCTCCACAGCGTATAGTGCATCTCAGACAGTGGGC
AGTGATATTGATAAGTCTTCTCAAGTTCCTCTTGGTGTAGATGGTAAAAGAAATATACTTCATGGCTTTTCAGGAACAACTAATCGCCCTGTAAAGCAGATAAAATTAGA
GGATGGAAAAGGCAGCCCTTTCTCAGCCGGAGGTCTAAGTGCATCAGTAGGTACCAACGGATCTGGACAACTTGGAATTGCCTCAGATCCCAATCTCCCAGGGACAAAAA
TCTCTGAGAAACCAACTTCAATGCTTTCCCGCGACGTCGAATCTGCACTACTGCAACAAGTTTTGAATCTAACTCCCGAACAGCTAAACTCGTTGCCGCTCGAACAGAGG
CAGCAAGTTATTGAGCTCCAGCAAGCACTTCGCAGAGATCAAATGCGGCCATCCTAGCGAGTAAATTGCCACTGATCAACCCGACACACTCGGCAGCTCCGCTCCGAGCA
ACCAAAGCTGGAAGGTGCTAGATTCAGCTAAGTAGATTGTAATATATTTGGCTCCACAAAAGATTCAACAAGTGACAGTCTAAACACCTGTAAAATTATTGCTTGCCGAA
GGGGTCCAAAAGCGACGGGTCCTGTCAACAAGGTATGAGTTTCCATAAACAGTATTCATGTAAGGCTTACAAGTTTGTGATTTATAGTGATTCCTGAATAATAACAATTG
AAGATGGGGGAAAATCCAATGGTGGAAGAATTTTGATTTTTTTAGGGTCTCTCTTATGGCCATTAGATTTAAGATCATATTTTTGCCACTTTTGCATCTCTTTCCTTTGC
ATAGTTTTATCGTCGTTTTCAGATTCTCGAGCGGTCGTTTTATGGTTTCGGTTCGTTCGTTTCTCTGTGTTTTCTATTTGGATCTTATTTTTGTTCCTGAATTGTG

Protein sequence

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MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPT
GHGESSQHQPIGLHIAITAAAVMAGALGGAQSATNQNILQSAAMPNDPLTLHLAKLSRNQLTEVMSGLKVMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQK
PNLRQPSTHPQLPLHDMQQGQPSSLQSQPGLPPLVPNRMQTGFVPKKETQMSLAPQNPLAPHQFSASQRPPLQSQIQPSLALQGTLTGIPGGSLLPSISLPGNISVRQQV
QVPASSSLKQHMRPPSQQYSGHGEAVIPVHNAQIANPEAKPSLLPRPSLSDSDFQPGPSTAYSASQTVGSDIDKSSQVPLGVDGKRNILHGFSGTTNRPVKQIKLEDGKG
SPFSAGGLSASVGTNGSGQLGIASDPNLPGTKISEKPTSMLSRDVESALLQQVLNLTPEQLNSLPLEQRQQVIELQQALRRDQMRPS

Tan0010120 (gene) of Snake gourd v1 genome