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Tan0010151 (gene) of Snake gourd v1 genome

Gene IDTan0010151
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionFerredoxin-thioredoxin reductase catalytic chain, chloroplastic
Genome locationLG06:44531942..44536448
RNA-Seq ExpressionTan0010151
SyntenyTan0010151
Gene Ontology termsGO:0016730 - oxidoreductase activity, acting on iron-sulfur proteins as donors (molecular function)
InterPro domainsIPR004209 - Ferredoxin thioredoxin reductase catalytic beta subunit
IPR036644 - Ferredoxin thioredoxin reductase catalytic beta subunit superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602457.1 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.4e-1854.81Show/hide
Query:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPPEKSLKIMRKISSSML-VSRTYLRVDKGLRLLL-----------------SRHYDEKAFEVAQGFWNCPCV
        S+ NIAVPLSG S  RS H+HV RAQGEP +KS++IMRK S      S TY  VDKG+  ++                  RHYD+KA EVAQGFWNCPCV
Subjt:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPPEKSLKIMRKISSSML-VSRTYLRVDKGLRLLL-----------------SRHYDEKAFEVAQGFWNCPCV

Query:  PMRE
        PMRE
Subjt:  PMRE

XP_022134322.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Momordica charantia]5.7e-1752.88Show/hide
Query:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPPEKSLKIMRKISSSML-VSRTYLRVDKGLRLLL-----------------SRHYDEKAFEVAQGFWNCPCV
        S+ NIA+PLS  S RRS   HV RAQGEP +KS++IMRK S      S TY  VDKG+  ++                  RHYD+KA EVAQGFWNCPCV
Subjt:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPPEKSLKIMRKISSSML-VSRTYLRVDKGLRLLL-----------------SRHYDEKAFEVAQGFWNCPCV

Query:  PMRE
        PMRE
Subjt:  PMRE

XP_022923802.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita moschata]1.4e-1854.81Show/hide
Query:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPPEKSLKIMRKISSSML-VSRTYLRVDKGLRLLL-----------------SRHYDEKAFEVAQGFWNCPCV
        S+ NIAVPLSG S  RS H+HV RAQGEP +KS++IMRK S      S TY  VDKG+  ++                  RHYD+KA EVAQGFWNCPCV
Subjt:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPPEKSLKIMRKISSSML-VSRTYLRVDKGLRLLL-----------------SRHYDEKAFEVAQGFWNCPCV

Query:  PMRE
        PMRE
Subjt:  PMRE

XP_022989856.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita maxima]1.4e-1854.81Show/hide
Query:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPPEKSLKIMRKISSSML-VSRTYLRVDKGLRLLL-----------------SRHYDEKAFEVAQGFWNCPCV
        S+ NIAVPLSG S  RS H+HV RAQGEP +KS++IMRK S      S TY  VDKG+  ++                  RHYD+KA EVAQGFWNCPCV
Subjt:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPPEKSLKIMRKISSSML-VSRTYLRVDKGLRLLL-----------------SRHYDEKAFEVAQGFWNCPCV

Query:  PMRE
        PMRE
Subjt:  PMRE

XP_023511536.1 ferredoxin-thioredoxin reductase catalytic chain, chloroplastic-like [Cucurbita pepo subsp. pepo]6.7e-1853.85Show/hide
Query:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPPEKSLKIMRKISSSML-VSRTYLRVDKGLRLLL-----------------SRHYDEKAFEVAQGFWNCPCV
        S+ NI VPLSG S  RS H+HV RAQGEP +KS++IMRK S      S TY  VDKG+  ++                  RHYD+KA EVAQGFWNCPCV
Subjt:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPPEKSLKIMRKISSSML-VSRTYLRVDKGLRLLL-----------------SRHYDEKAFEVAQGFWNCPCV

Query:  PMRE
        PMRE
Subjt:  PMRE

TrEMBL top hitse value%identityAlignment
A0A1S3C819 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic1.1e-1652.88Show/hide
Query:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPPEKSLKIMRKISSSML-VSRTYLRVDKGLRLLL-----------------SRHYDEKAFEVAQGFWNCPCV
        S+ NIAVPLSG S   S H HV RAQ EP EKS++IMRK S      S TY  VDKG+  ++                  RHYD+K  EVAQGFWNCPCV
Subjt:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPPEKSLKIMRKISSSML-VSRTYLRVDKGLRLLL-----------------SRHYDEKAFEVAQGFWNCPCV

Query:  PMRE
        PMRE
Subjt:  PMRE

A0A5A7T273 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic1.1e-1652.88Show/hide
Query:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPPEKSLKIMRKISSSML-VSRTYLRVDKGLRLLL-----------------SRHYDEKAFEVAQGFWNCPCV
        S+ NIAVPLSG S   S H HV RAQ EP EKS++IMRK S      S TY  VDKG+  ++                  RHYD+K  EVAQGFWNCPCV
Subjt:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPPEKSLKIMRKISSSML-VSRTYLRVDKGLRLLL-----------------SRHYDEKAFEVAQGFWNCPCV

Query:  PMRE
        PMRE
Subjt:  PMRE

A0A6J1BYG9 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic2.8e-1752.88Show/hide
Query:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPPEKSLKIMRKISSSML-VSRTYLRVDKGLRLLL-----------------SRHYDEKAFEVAQGFWNCPCV
        S+ NIA+PLS  S RRS   HV RAQGEP +KS++IMRK S      S TY  VDKG+  ++                  RHYD+KA EVAQGFWNCPCV
Subjt:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPPEKSLKIMRKISSSML-VSRTYLRVDKGLRLLL-----------------SRHYDEKAFEVAQGFWNCPCV

Query:  PMRE
        PMRE
Subjt:  PMRE

A0A6J1E756 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic6.6e-1954.81Show/hide
Query:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPPEKSLKIMRKISSSML-VSRTYLRVDKGLRLLL-----------------SRHYDEKAFEVAQGFWNCPCV
        S+ NIAVPLSG S  RS H+HV RAQGEP +KS++IMRK S      S TY  VDKG+  ++                  RHYD+KA EVAQGFWNCPCV
Subjt:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPPEKSLKIMRKISSSML-VSRTYLRVDKGLRLLL-----------------SRHYDEKAFEVAQGFWNCPCV

Query:  PMRE
        PMRE
Subjt:  PMRE

A0A6J1JLC1 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic6.6e-1954.81Show/hide
Query:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPPEKSLKIMRKISSSML-VSRTYLRVDKGLRLLL-----------------SRHYDEKAFEVAQGFWNCPCV
        S+ NIAVPLSG S  RS H+HV RAQGEP +KS++IMRK S      S TY  VDKG+  ++                  RHYD+KA EVAQGFWNCPCV
Subjt:  STDNIAVPLSGPSPRRSCHNHVFRAQGEPPEKSLKIMRKISSSML-VSRTYLRVDKGLRLLL-----------------SRHYDEKAFEVAQGFWNCPCV

Query:  PMRE
        PMRE
Subjt:  PMRE

SwissProt top hitse value%identityAlignment
O49856 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic3.3e-1547.22Show/hide
Query:  STFDSTDNIAVPLSGPSPRRSCHNHVFRAQGEPPEKSLKIMRKISSSML-VSRTYLRVDKGLR-----------------LLLSRHYDEKAFEVAQGFWN
        +T  ST  +AVP      RR  +  V RAQ EP +KS++IMRK S      S TY  VDKG+                  L   RHYD+KA EVAQGFWN
Subjt:  STFDSTDNIAVPLSGPSPRRSCHNHVFRAQGEPPEKSLKIMRKISSSML-VSRTYLRVDKGLR-----------------LLLSRHYDEKAFEVAQGFWN

Query:  CPCVPMRE
        CPCVPMRE
Subjt:  CPCVPMRE

P41348 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic8.9e-1345.45Show/hide
Query:  PLSGP--SPRRSCHNHVFRAQGEPPEKSLKIMRKISSSML-VSRTYLRVDK-----------------GLRLLLSRHYDEKAFEVAQGFWNCPCVPMRE
        P+S P  SPRR   + V RAQ +P +KS+++MRK S      S TY  VDK                 G  L   RHYD+K  E  QGFWNCPCVPMRE
Subjt:  PLSGP--SPRRSCHNHVFRAQGEPPEKSLKIMRKISSSML-VSRTYLRVDK-----------------GLRLLLSRHYDEKAFEVAQGFWNCPCVPMRE

P41349 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic9.2e-1044.58Show/hide
Query:  VFRAQGEPPEKSLKIMRKISSSML-VSRTYLRVDKGLR-----------------LLLSRHYDEKAFEVAQGFWNCPCVPMRE
        V  ++ EP +KS++IMRK S      S TY  VDKG+                  L   R+YD+KA E  QGFWNCPCVPMRE
Subjt:  VFRAQGEPPEKSLKIMRKISSSML-VSRTYLRVDKGLR-----------------LLLSRHYDEKAFEVAQGFWNCPCVPMRE

Q6K471 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic7.8e-0943.75Show/hide
Query:  PSPR-RSCHNHV--FRAQGEPPEKSLKIMRKISSSML-VSRTYLRVDK-----------------GLRLLLSRHYDEKAFEVAQGFWNCPCVPMRE
        P PR R C   V    A  +  +KSL+IMRK S      S T+   +K                 G  L   RHYD+KA EVAQGFWNCPCVPMRE
Subjt:  PSPR-RSCHNHV--FRAQGEPPEKSLKIMRKISSSML-VSRTYLRVDK-----------------GLRLLLSRHYDEKAFEVAQGFWNCPCVPMRE

Q9SJ89 Ferredoxin-thioredoxin reductase catalytic chain, chloroplastic9.5e-1546.36Show/hide
Query:  LQSTFDSTDNIAVPLSGPSPRRSCHNHVFRAQGEPPEKSLKIMRKISSSML-VSRTYLRVDKGLR-----------------LLLSRHYDEKAFEVAQGF
        LQ+   S   ++ PL G +PR S    V RA+ EP EKS++IMRK S      S TY  VDKG+                  L   RHYD+KA EV QGF
Subjt:  LQSTFDSTDNIAVPLSGPSPRRSCHNHVFRAQGEPPEKSLKIMRKISSSML-VSRTYLRVDKGLR-----------------LLLSRHYDEKAFEVAQGF

Query:  WNCPCVPMRE
        WNCPCVPMRE
Subjt:  WNCPCVPMRE

Arabidopsis top hitse value%identityAlignment
AT2G04700.1 ferredoxin thioredoxin reductase catalytic beta chain family protein6.7e-1646.36Show/hide
Query:  LQSTFDSTDNIAVPLSGPSPRRSCHNHVFRAQGEPPEKSLKIMRKISSSML-VSRTYLRVDKGLR-----------------LLLSRHYDEKAFEVAQGF
        LQ+   S   ++ PL G +PR S    V RA+ EP EKS++IMRK S      S TY  VDKG+                  L   RHYD+KA EV QGF
Subjt:  LQSTFDSTDNIAVPLSGPSPRRSCHNHVFRAQGEPPEKSLKIMRKISSSML-VSRTYLRVDKGLR-----------------LLLSRHYDEKAFEVAQGF

Query:  WNCPCVPMRE
        WNCPCVPMRE
Subjt:  WNCPCVPMRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGGATTGCCATTAGGCGAAATTAGGAGTATTATAAGCGAAAATTCCAAATTGCTCCCTCTTCTGCATCTTCTTCAATCGACATTCGACTCAACCGACAATATCGC
CGTTCCACTCTCCGGTCCTTCCCCAGACGCCTCTCACACAACCATGTCTTTCGAGCTCAAGGAAAATTCCAAATTGCTCCCTCTTCTGCATCTTCTTCAATCGACATTCG
ACTCAACCGACAATATCGCCGTTCCACTCTCCGGTCCTTCCCCCAGACGTTCCTGTCACAACCATGTCTTTCGAGCTCAAGGAGAACCGCCCGAGAAGTCGCTCAAAATA
ATGAGGAAAATCTCGAGTAGTATGCTCGTAAGTCGAACGTATTTACGTGTAGACAAGGGGTTACGGTTGTTGTTATCAAGGCATTATGATGAAAAAGCTTTTGAGGTTGC
ACAAGGTTTTTGGAACTGTCCATGTGTTCCTATGAGAGAAAGCTTCATAATTCTTATTCTTATAAAAGAGAAAGGAAAAGAGAAGGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATAGGATTGCCATTAGGCGAAATTAGGAGTATTATAAGCGAAAATTCCAAATTGCTCCCTCTTCTGCATCTTCTTCAATCGACATTCGACTCAACCGACAATATCGC
CGTTCCACTCTCCGGTCCTTCCCCAGACGCCTCTCACACAACCATGTCTTTCGAGCTCAAGGAAAATTCCAAATTGCTCCCTCTTCTGCATCTTCTTCAATCGACATTCG
ACTCAACCGACAATATCGCCGTTCCACTCTCCGGTCCTTCCCCCAGACGTTCCTGTCACAACCATGTCTTTCGAGCTCAAGGAGAACCGCCCGAGAAGTCGCTCAAAATA
ATGAGGAAAATCTCGAGTAGTATGCTCGTAAGTCGAACGTATTTACGTGTAGACAAGGGGTTACGGTTGTTGTTATCAAGGCATTATGATGAAAAAGCTTTTGAGGTTGC
ACAAGGTTTTTGGAACTGTCCATGTGTTCCTATGAGAGAAAGCTTCATAATTCTTATTCTTATAAAAGAGAAAGGAAAAGAGAAGGGGTGA
Protein sequenceShow/hide protein sequence
MIGLPLGEIRSIISENSKLLPLLHLLQSTFDSTDNIAVPLSGPSPDASHTTMSFELKENSKLLPLLHLLQSTFDSTDNIAVPLSGPSPRRSCHNHVFRAQGEPPEKSLKI
MRKISSSMLVSRTYLRVDKGLRLLLSRHYDEKAFEVAQGFWNCPCVPMRESFIILILIKEKGKEKG