; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0010159 (gene) of Snake gourd v1 genome

Gene IDTan0010159
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPMD domain-containing protein
Genome locationLG09:47703623..47706492
RNA-Seq ExpressionTan0010159
SyntenyTan0010159
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053466.1 hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]2.1e-3451.08Show/hide
Query:  IPTTVRGPMMVLFSGEGGAKYFNDFEARVHIHKGKYVSWYASLPARNRGELLRDDEKLSFWSSSFFISVRSCFLSLRSVSSMVIEAYNPCRFSRQFGFYQ
        +P  VRGP M  FSGEGG+ YF ++EAR  IH G  + W+A+L  RN+ E + D    SF   S+F+S+RSC+LS R  ++ +I +Y+P RF RQFGFYQ
Subjt:  IPTTVRGPMMVLFSGEGGAKYFNDFEARVHIHKGKYVSWYASLPARNRGELLRDDEKLSFWSSSFFISVRSCFLSLRSVSSMVIEAYNPCRFSRQFGFYQ

Query:  DVPHDLGQKIPEVNLDNVLRLWMICIQGGTLSEIYLPVR
        D+P+D+G   P + LDN+L  W IC++  TLSE+YLPVR
Subjt:  DVPHDLGQKIPEVNLDNVLRLWMICIQGGTLSEIYLPVR

KAA0053466.1 hypothetical protein E6C27_scaffold190G00140 [Cucumis melo var. makuwa]8.8e-0125.83Show/hide
Query:  ACLNLASLPLGM-------------MRLATSKIFQGISETCGTNLPSLQKVVGEYFQRVEKFNELQLSFSSQLTLTSKASQLQETKFSLEKIQSNESLTL
        A L  + LPLG+             +R   + +  GI +     L SL++ +  Y +RVE FN++Q S+S+QL+ T KA QL E   ++++  +      
Subjt:  ACLNLASLPLGM-------------MRLATSKIFQGISETCGTNLPSLQKVVGEYFQRVEKFNELQLSFSSQLTLTSKASQLQETKFSLEKIQSNESLTL

Query:  AEIDALSQQHQQILQEKEEYKAKIRTL--EIINLEMLRGMLEDA--QQELQ
         +   + ++  ++  E++E + +++++  E   L +L     +A  QQEL+
Subjt:  AEIDALSQQHQQILQEKEEYKAKIRTL--EIINLEMLRGMLEDA--QQELQ

KAA0060136.1 uncharacterized protein E6C27_scaffold39G00570 [Cucumis melo var. makuwa]1.2e-3759.85Show/hide
Query:  PTTVRGPMMVLFSGEGGAKYFNDFEARVHIHKGKYVSWYASLPARNRGELLRDDEKLSFWSSSFFISVRSCFLSLRSVSSMVIEAYNPCRFSRQFGFYQD
        PT++RGP MV FSGEGGAKY+ + EAR HIH  KYVSW+A L A+N+ ELL DD  L  W++SFFIS+R CFL  +  SS VIE Y+PCRF RQFGFYQD
Subjt:  PTTVRGPMMVLFSGEGGAKYFNDFEARVHIHKGKYVSWYASLPARNRGELLRDDEKLSFWSSSFFISVRSCFLSLRSVSSMVIEAYNPCRFSRQFGFYQD

Query:  VPHDLGQKIPEVNLDNVLRLWMICIQGGTLSE
        VP+DLG+KIP+ NL N    W +   G  L +
Subjt:  VPHDLGQKIPEVNLDNVLRLWMICIQGGTLSE

XP_031739998.1 uncharacterized protein LOC116403342 [Cucumis sativus]2.6e-4568.22Show/hide
Query:  MVLFSGEGGAKYFNDFEARVHIHKGKYVSWYASLPARNRGELLRDDEKLSFWSSSFFISVRSCFLSLRSVSSMVIEAYNPCRFSRQFGFYQDVPHDLGQK
        MV FSGEGGAKY+ + EAR HIHKGKYVSW+A LP +N+ ELL DD +L  W++SFFIS+RSCFLS +  SS VIE Y+PCRFSRQFGFYQDVP+DLG++
Subjt:  MVLFSGEGGAKYFNDFEARVHIHKGKYVSWYASLPARNRGELLRDDEKLSFWSSSFFISVRSCFLSLRSVSSMVIEAYNPCRFSRQFGFYQDVPHDLGQK

Query:  IPEVNLDNVLRLWMICIQGGTLSEIYLPV
        IPE N  NV   WMICI+  TLS++YLPV
Subjt:  IPEVNLDNVLRLWMICIQGGTLSEIYLPV

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]2.5e-4867.15Show/hide
Query:  PTTVRGPMMVLFSGEGGAKYFNDFEARVHIHKGKYVSWYASLPARNRGELLRDDEKLSFWSSSFFISVRSCFLSLRSVSSMVIEAYNPCRFSRQFGFYQD
        P ++RGP MV FSGEGGAKY+ + EAR HIHKGKYVSW+A LP +N+ ELL DD +L  W++SFFIS+RSCFLS +  SS VIE Y+PCRFSRQFGFYQD
Subjt:  PTTVRGPMMVLFSGEGGAKYFNDFEARVHIHKGKYVSWYASLPARNRGELLRDDEKLSFWSSSFFISVRSCFLSLRSVSSMVIEAYNPCRFSRQFGFYQD

Query:  VPHDLGQKIPEVNLDNVLRLWMICIQGGTLSEIYLPV
        VP+DLG++IPE N  NV   WMICI+  TLS++YLPV
Subjt:  VPHDLGQKIPEVNLDNVLRLWMICIQGGTLSEIYLPV

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]1.7e-1255Show/hide
Query:  MVYFTKHPDRKKNCLVILKDKDQPLDSGVILP-----------SQPPLDNSIFLSNLSKERPLSPDSTLKAWFLESSIHN
        MV+FT++ D  K CL+ILKD DQ L+ G+ILP           SQ P DN IFL   SKER ++P+S+LK+WFLESSIHN
Subjt:  MVYFTKHPDRKKNCLVILKDKDQPLDSGVILP-----------SQPPLDNSIFLSNLSKERPLSPDSTLKAWFLESSIHN

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]2.0e-4561.49Show/hide
Query:  PTTVRGPMMVLFSGEGGAKYFNDFEARVHIHKGKYVSWYASLPARNRGELLRDDEKLSFWSSSFFISVRSCFLSLRSVSSMVIEAYNPCRFSRQFGFYQD
        PT++RGP MV FSGEGGAKY+ + EAR HIHK KYVSW+A L A+N+ ELL DD  L  W++SFFIS+R CFL  +  SS VIE Y+PCRF RQFGFYQD
Subjt:  PTTVRGPMMVLFSGEGGAKYFNDFEARVHIHKGKYVSWYASLPARNRGELLRDDEKLSFWSSSFFISVRSCFLSLRSVSSMVIEAYNPCRFSRQFGFYQD

Query:  VPHDLGQKIPEVNLDNVLRLWMICIQGGTLSEIYLPVRGFACLNLASL
        VP+DLG+KIP+ NL NV   WMIC++  TLS++YLP   F   N  +L
Subjt:  VPHDLGQKIPEVNLDNVLRLWMICIQGGTLSEIYLPVRGFACLNLASL

TrEMBL top hitse value%identityAlignment
A0A5A7UGW6 PMD domain-containing protein1.0e-3451.08Show/hide
Query:  IPTTVRGPMMVLFSGEGGAKYFNDFEARVHIHKGKYVSWYASLPARNRGELLRDDEKLSFWSSSFFISVRSCFLSLRSVSSMVIEAYNPCRFSRQFGFYQ
        +P  VRGP M  FSGEGG+ YF ++EAR  IH G  + W+A+L  RN+ E + D    SF   S+F+S+RSC+LS R  ++ +I +Y+P RF RQFGFYQ
Subjt:  IPTTVRGPMMVLFSGEGGAKYFNDFEARVHIHKGKYVSWYASLPARNRGELLRDDEKLSFWSSSFFISVRSCFLSLRSVSSMVIEAYNPCRFSRQFGFYQ

Query:  DVPHDLGQKIPEVNLDNVLRLWMICIQGGTLSEIYLPVR
        D+P+D+G   P + LDN+L  W IC++  TLSE+YLPVR
Subjt:  DVPHDLGQKIPEVNLDNVLRLWMICIQGGTLSEIYLPVR

A0A5A7UGW6 PMD domain-containing protein4.3e-0125.83Show/hide
Query:  ACLNLASLPLGM-------------MRLATSKIFQGISETCGTNLPSLQKVVGEYFQRVEKFNELQLSFSSQLTLTSKASQLQETKFSLEKIQSNESLTL
        A L  + LPLG+             +R   + +  GI +     L SL++ +  Y +RVE FN++Q S+S+QL+ T KA QL E   ++++  +      
Subjt:  ACLNLASLPLGM-------------MRLATSKIFQGISETCGTNLPSLQKVVGEYFQRVEKFNELQLSFSSQLTLTSKASQLQETKFSLEKIQSNESLTL

Query:  AEIDALSQQHQQILQEKEEYKAKIRTL--EIINLEMLRGMLEDA--QQELQ
         +   + ++  ++  E++E + +++++  E   L +L     +A  QQEL+
Subjt:  AEIDALSQQHQQILQEKEEYKAKIRTL--EIINLEMLRGMLEDA--QQELQ

A0A5A7UGW6 PMD domain-containing protein2.9e-3450.36Show/hide
Query:  IPTTVRGPMMVLFSGEGGAKYFNDFEARVHIHKGKYVSWYASLPARNRGELLRDDEKLSFWSSSFFISVRSCFLSLRSVSSMVIEAYNPCRFSRQFGFYQ
        +PT VRGP M  FS EGG+ YF ++EAR  IH G  + W+ASL  R++ E + D    SF  +S+F+S+RSC+LS R  ++ +I +Y+P RF RQFGFYQ
Subjt:  IPTTVRGPMMVLFSGEGGAKYFNDFEARVHIHKGKYVSWYASLPARNRGELLRDDEKLSFWSSSFFISVRSCFLSLRSVSSMVIEAYNPCRFSRQFGFYQ

Query:  DVPHDLGQKIPEVNLDNVLRLWMICIQGGTLSEIYLPVR
        D+P+D+G   P + LDN+L  W IC +  TLSE+YLP R
Subjt:  DVPHDLGQKIPEVNLDNVLRLWMICIQGGTLSEIYLPVR

A0A5D3C9B7 Uncharacterized protein9.7e-4661.49Show/hide
Query:  PTTVRGPMMVLFSGEGGAKYFNDFEARVHIHKGKYVSWYASLPARNRGELLRDDEKLSFWSSSFFISVRSCFLSLRSVSSMVIEAYNPCRFSRQFGFYQD
        PT++RGP MV FSGEGGAKY+ + EAR HIHK KYVSW+A L A+N+ ELL DD  L  W++SFFIS+R CFL  +  SS VIE Y+PCRF RQFGFYQD
Subjt:  PTTVRGPMMVLFSGEGGAKYFNDFEARVHIHKGKYVSWYASLPARNRGELLRDDEKLSFWSSSFFISVRSCFLSLRSVSSMVIEAYNPCRFSRQFGFYQD

Query:  VPHDLGQKIPEVNLDNVLRLWMICIQGGTLSEIYLPVRGFACLNLASL
        VP+DLG+KIP+ NL NV   WMIC++  TLS++YLP   F   N  +L
Subjt:  VPHDLGQKIPEVNLDNVLRLWMICIQGGTLSEIYLPVRGFACLNLASL

A0A5D3C9B7 Uncharacterized protein1.6e-0349.18Show/hide
Query:  MVYFTKHPDRKKNCLVILKDKDQPLDSGVILP-----------SQPPLDNSIFLSNLSKER
        MVYFT++ D  K CL+ILKD++Q LDSG+ILP           SQ   DN I L   SKE+
Subjt:  MVYFTKHPDRKKNCLVILKDKDQPLDSGVILP-----------SQPPLDNSIFLSNLSKER

A0A5D3C9B7 Uncharacterized protein5.7e-3859.85Show/hide
Query:  PTTVRGPMMVLFSGEGGAKYFNDFEARVHIHKGKYVSWYASLPARNRGELLRDDEKLSFWSSSFFISVRSCFLSLRSVSSMVIEAYNPCRFSRQFGFYQD
        PT++RGP MV FSGEGGAKY+ + EAR HIH  KYVSW+A L A+N+ ELL DD  L  W++SFFIS+R CFL  +  SS VIE Y+PCRF RQFGFYQD
Subjt:  PTTVRGPMMVLFSGEGGAKYFNDFEARVHIHKGKYVSWYASLPARNRGELLRDDEKLSFWSSSFFISVRSCFLSLRSVSSMVIEAYNPCRFSRQFGFYQD

Query:  VPHDLGQKIPEVNLDNVLRLWMICIQGGTLSE
        VP+DLG+KIP+ NL N    W +   G  L +
Subjt:  VPHDLGQKIPEVNLDNVLRLWMICIQGGTLSE

E5GCB9 PMD domain-containing protein4.2e-3349.64Show/hide
Query:  IPTTVRGPMMVLFSGEGGAKYFNDFEARVHIHKGKYVSWYASLPARNRGELLRDDEKLSFWSSSFFISVRSCFLSLRSVSSMVIEAYNPCRFSRQFGFYQ
        +PT VRGP M  FSGEGG+ YF ++EAR  IH G  + W+A+L  R++ E + D    SF   S+F+S+RSC+LS R  ++ +I +Y+P R  RQFGFYQ
Subjt:  IPTTVRGPMMVLFSGEGGAKYFNDFEARVHIHKGKYVSWYASLPARNRGELLRDDEKLSFWSSSFFISVRSCFLSLRSVSSMVIEAYNPCRFSRQFGFYQ

Query:  DVPHDLGQKIPEVNLDNVLRLWMICIQGGTLSEIYLPVR
        D+P+D+G   P + LDN+L  W IC +  TL E+YLPVR
Subjt:  DVPHDLGQKIPEVNLDNVLRLWMICIQGGTLSEIYLPVR

E5GCB9 PMD domain-containing protein1.6e+0025.4Show/hide
Query:  MRLATSKIFQGISETCGTNLPSLQKVVGEYFQRVEKFNELQLSFSSQLTLTSKASQLQETKFSLEKIQSNESLTLAEIDALSQQHQQILQEKEEYKAKIR
        +R   + +  GI +     L SL++ +  Y +RV+ FN++Q S+S+QL  T KA QL E   ++++  +       ++  + ++  ++  E++E + ++ 
Subjt:  MRLATSKIFQGISETCGTNLPSLQKVVGEYFQRVEKFNELQLSFSSQLTLTSKASQLQETKFSLEKIQSNESLTLAEIDALSQQHQQILQEKEEYKAKIR

Query:  TL--EIINLEMLRGMLEDA--QQELQ
        ++  E   L +L     +A  QQEL+
Subjt:  TL--EIINLEMLRGMLEDA--QQELQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTATTTTACGAAACACCCTGATCGAAAGAAAAATTGCTTGGTCATTTTAAAAGATAAAGATCAGCCTCTCGATAGTGGAGTCATTCTTCCGTCACAACCACCCTT
AGACAACTCTATCTTTCTATCCAATTTGTCTAAAGAGCGACCCCTAAGTCCTGATTCTACATTGAAGGCGTGGTTTTTAGAGTCATCGATACATAATATGATAGGAATCC
CTACAACTGTTAGGGGGCCAATGATGGTGTTGTTTTCTGGCGAAGGTGGAGCCAAGTACTTCAATGATTTTGAAGCTCGTGTACATATTCACAAGGGTAAGTATGTCTCG
TGGTATGCGAGCCTTCCAGCTAGAAATAGGGGTGAACTTTTGCGAGATGACGAGAAACTGTCATTCTGGTCTTCTTCGTTCTTTATAAGTGTTCGATCTTGCTTTTTATC
CTTGCGGTCAGTCTCTTCGATGGTCATTGAAGCTTATAATCCCTGTCGATTTAGTCGACAATTTGGATTTTATCAGGATGTACCACATGATTTGGGCCAGAAGATTCCTG
AAGTCAATCTCGACAATGTGTTACGCCTTTGGATGATATGTATTCAAGGAGGAACATTGTCTGAAATATATCTTCCAGTAAGAGGATTCGCATGTTTGAACCTAGCGAGT
TTGCCCCTAGGGATGATGAGGCTAGCGACGAGCAAAATTTTTCAAGGGATCTCAGAGACTTGTGGTACCAATCTTCCTTCTCTTCAAAAAGTTGTAGGCGAGTATTTTCA
GAGAGTGGAAAAGTTTAACGAATTACAGTTGTCTTTTTCTTCCCAACTTACCTTAACAAGTAAGGCAAGTCAACTGCAAGAAACTAAATTTAGTTTGGAGAAGATACAAA
GCAATGAAAGCCTAACACTTGCAGAGATAGATGCGCTTTCACAACAACATCAACAAATATTACAGGAGAAGGAAGAATATAAAGCAAAGATTAGAACTCTGGAAATCATT
AACTTGGAGATGCTTCGAGGAATGTTGGAGGATGCACAACAAGAACTGCAGAACTACAAGTGGATGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGTATTTTACGAAACACCCTGATCGAAAGAAAAATTGCTTGGTCATTTTAAAAGATAAAGATCAGCCTCTCGATAGTGGAGTCATTCTTCCGTCACAACCACCCTT
AGACAACTCTATCTTTCTATCCAATTTGTCTAAAGAGCGACCCCTAAGTCCTGATTCTACATTGAAGGCGTGGTTTTTAGAGTCATCGATACATAATATGATAGGAATCC
CTACAACTGTTAGGGGGCCAATGATGGTGTTGTTTTCTGGCGAAGGTGGAGCCAAGTACTTCAATGATTTTGAAGCTCGTGTACATATTCACAAGGGTAAGTATGTCTCG
TGGTATGCGAGCCTTCCAGCTAGAAATAGGGGTGAACTTTTGCGAGATGACGAGAAACTGTCATTCTGGTCTTCTTCGTTCTTTATAAGTGTTCGATCTTGCTTTTTATC
CTTGCGGTCAGTCTCTTCGATGGTCATTGAAGCTTATAATCCCTGTCGATTTAGTCGACAATTTGGATTTTATCAGGATGTACCACATGATTTGGGCCAGAAGATTCCTG
AAGTCAATCTCGACAATGTGTTACGCCTTTGGATGATATGTATTCAAGGAGGAACATTGTCTGAAATATATCTTCCAGTAAGAGGATTCGCATGTTTGAACCTAGCGAGT
TTGCCCCTAGGGATGATGAGGCTAGCGACGAGCAAAATTTTTCAAGGGATCTCAGAGACTTGTGGTACCAATCTTCCTTCTCTTCAAAAAGTTGTAGGCGAGTATTTTCA
GAGAGTGGAAAAGTTTAACGAATTACAGTTGTCTTTTTCTTCCCAACTTACCTTAACAAGTAAGGCAAGTCAACTGCAAGAAACTAAATTTAGTTTGGAGAAGATACAAA
GCAATGAAAGCCTAACACTTGCAGAGATAGATGCGCTTTCACAACAACATCAACAAATATTACAGGAGAAGGAAGAATATAAAGCAAAGATTAGAACTCTGGAAATCATT
AACTTGGAGATGCTTCGAGGAATGTTGGAGGATGCACAACAAGAACTGCAGAACTACAAGTGGATGCCATGA
Protein sequenceShow/hide protein sequence
MVYFTKHPDRKKNCLVILKDKDQPLDSGVILPSQPPLDNSIFLSNLSKERPLSPDSTLKAWFLESSIHNMIGIPTTVRGPMMVLFSGEGGAKYFNDFEARVHIHKGKYVS
WYASLPARNRGELLRDDEKLSFWSSSFFISVRSCFLSLRSVSSMVIEAYNPCRFSRQFGFYQDVPHDLGQKIPEVNLDNVLRLWMICIQGGTLSEIYLPVRGFACLNLAS
LPLGMMRLATSKIFQGISETCGTNLPSLQKVVGEYFQRVEKFNELQLSFSSQLTLTSKASQLQETKFSLEKIQSNESLTLAEIDALSQQHQQILQEKEEYKAKIRTLEII
NLEMLRGMLEDAQQELQNYKWMP