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Tan0010217 (gene) of Snake gourd v1 genome

Gene IDTan0010217
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG03:72957865..72958449
RNA-Seq ExpressionTan0010217
SyntenyTan0010217
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXC12618.1 hypothetical protein L484_012996 [Morus notabilis]4.1e-2345.81Show/hide
Query:  MSHRKVLSQGNVPFSWEEKPGVSKFWFPD------FEAL----------ASLQSF--------------DGREIPPPPCRLQPRPIRNASGKGTRWEEDP
        M+HRKV SQG++PF WE+KPG+SK    D       +AL          +  Q F              D  +IPPPPC  QP P R++S KG RW+EDP
Subjt:  MSHRKVLSQGNVPFSWEEKPGVSKFWFPD------FEAL----------ASLQSF--------------DGREIPPPPCRLQPRPIRNASGKGTRWEEDP

Query:  FLLAYKECTKSVKNGQFLQTGSKGAVAVVKKSKFFGFSCKSVDSCEIREDGFFNL
        FLLAYKECTK VK G+  +   K +  V+ KS F  FSCK  +SCE+RED F  L
Subjt:  FLLAYKECTKSVKNGQFLQTGSKGAVAVVKKSKFFGFSCKSVDSCEIREDGFFNL

KAG6594957.1 hypothetical protein SDJN03_11510, partial [Cucurbita argyrosperma subsp. sororia]3.4e-3356.25Show/hide
Query:  MSHRKVLSQGNVPFSWEEKPGVS-KFWFPDFEALA-----SLQSFD--GREIPPPPCRLQPRPIRNASGKGTRWEEDPFLLAYKECTKSVKNGQFLQTGS
        MSH+K+ S+GNVPFSWEEKPG+S K  F D + L          FD  G+  PPPPCR+QP  +RNAS KG+RWEEDPFL AYKECTKSVK G+      
Subjt:  MSHRKVLSQGNVPFSWEEKPGVS-KFWFPDFEALA-----SLQSFD--GREIPPPPCRLQPRPIRNASGKGTRWEEDPFLLAYKECTKSVKNGQFLQTGS

Query:  KGAVAVVKKSKFFGFSCKSVDSCEIREDGFFNLRTYRIRTSTWK
             V KKSK FGF CKS DSCEIR+   F L    IR  +WK
Subjt:  KGAVAVVKKSKFFGFSCKSVDSCEIREDGFFNLRTYRIRTSTWK

KAG6604109.1 hypothetical protein SDJN03_04718, partial [Cucurbita argyrosperma subsp. sororia]5.2e-2660.53Show/hide
Query:  MSHRKVLSQGNVPFSWEEKPGVSKFWFPDFEALASLQS-----------FD-GREIPPPPCRLQPRPIRNASGKGTRWEEDPFLLAYKECTKSVKNGQFL
        M+HRKVLSQ N+PFSWE+ P  SKF+F DF+ALA   S           FD   +IPPPP R QPR IRNAS K    E+DPFL+AYKECTKSVKNG F+
Subjt:  MSHRKVLSQGNVPFSWEEKPGVSKFWFPDFEALASLQS-----------FD-GREIPPPPCRLQPRPIRNASGKGTRWEEDPFLLAYKECTKSVKNGQFL

Query:  QTGSKGAVAVVKKS
        + G+KGA AV KKS
Subjt:  QTGSKGAVAVVKKS

KGN48633.1 hypothetical protein Csa_003745 [Cucumis sativus]1.0e-2149.67Show/hide
Query:  HRKVLSQGN-VPFSWEEKPGVSKFWFPDFEALA-------------SLQSFD---GREIPPPPCRLQPRPIRNASGKGTRWEEDPFLLAYKECTKSVKNG
        HRK+LSQGN +P   +  PGVSK  F DF+ALA                 FD     +IPPPPCRL P P  NA        +DPFLLAYKECTKSVKN 
Subjt:  HRKVLSQGN-VPFSWEEKPGVSKFWFPDFEALA-------------SLQSFD---GREIPPPPCRLQPRPIRNASGKGTRWEEDPFLLAYKECTKSVKNG

Query:  QFLQTGSKGAVAVVKKSKF-FG-FSCKSVDSCEIREDGFFNLRTYRIRTSTWK
             G    V VVKKSKF FG FSCK++ SC+I ++ FF L    I  STWK
Subjt:  QFLQTGSKGAVAVVKKSKF-FG-FSCKSVDSCEIREDGFFNLRTYRIRTSTWK

PON40333.1 hypothetical protein PanWU01x14_298200 [Parasponia andersonii]1.6e-2246.21Show/hide
Query:  MSHRKVLSQGNVPFSWEEKPGVSKFWFP-------DFEALASLQS--------FDGREIPPPPCRLQPRPIRNASGKGTRWEEDPFLLAYKECTKSVK--
        MSHRKV SQG++PFSWE+KPG+SK             EAL  + S        ++  +IP PPC +   P R++S KG +W+EDPFLLAYKECTK +K  
Subjt:  MSHRKVLSQGNVPFSWEEKPGVSKFWFP-------DFEALASLQS--------FDGREIPPPPCRLQPRPIRNASGKGTRWEEDPFLLAYKECTKSVK--

Query:  ---NGQFLQTGSKGAVAVVKKSKFFGFSCKSVDSCEIREDGFFNL
           NGQ  + GSK     VKKS F  FSCK+  +CE++++ F  L
Subjt:  ---NGQFLQTGSKGAVAVVKKSKFFGFSCKSVDSCEIREDGFFNL

TrEMBL top hitse value%identityAlignment
A0A061DHT6 Uncharacterized protein4.2e-2143.75Show/hide
Query:  MSHRKVLSQGNVPFSWEEKPGVSKFWFPD------------------FEALASLQSFDGREIPPPPCRLQPRPIRNASGKGTR-WEEDPFLLAYKECTKS
        MS +KV SQGN+PFSWE+KPGVSK    D                   +A  S      +++PPPPC +Q  P R+ S KG R W+EDPFL AYKECTK 
Subjt:  MSHRKVLSQGNVPFSWEEKPGVSKFWFPD------------------FEALASLQSFDGREIPPPPCRLQPRPIRNASGKGTR-WEEDPFLLAYKECTKS

Query:  VKNGQFLQTGSKGAVAVVKKSKFFGFSCKSVDSCEIREDGFFNL
          NG++   G K   + V+K K   FSCK  +SC++R D    L
Subjt:  VKNGQFLQTGSKGAVAVVKKSKFFGFSCKSVDSCEIREDGFFNL

A0A0A0KGJ1 Uncharacterized protein4.9e-2249.67Show/hide
Query:  HRKVLSQGN-VPFSWEEKPGVSKFWFPDFEALA-------------SLQSFD---GREIPPPPCRLQPRPIRNASGKGTRWEEDPFLLAYKECTKSVKNG
        HRK+LSQGN +P   +  PGVSK  F DF+ALA                 FD     +IPPPPCRL P P  NA        +DPFLLAYKECTKSVKN 
Subjt:  HRKVLSQGN-VPFSWEEKPGVSKFWFPDFEALA-------------SLQSFD---GREIPPPPCRLQPRPIRNASGKGTRWEEDPFLLAYKECTKSVKNG

Query:  QFLQTGSKGAVAVVKKSKF-FG-FSCKSVDSCEIREDGFFNLRTYRIRTSTWK
             G    V VVKKSKF FG FSCK++ SC+I ++ FF L    I  STWK
Subjt:  QFLQTGSKGAVAVVKKSKF-FG-FSCKSVDSCEIREDGFFNLRTYRIRTSTWK

A0A2P5AUW8 Uncharacterized protein7.6e-2346.21Show/hide
Query:  MSHRKVLSQGNVPFSWEEKPGVSKFWFP-------DFEALASLQS--------FDGREIPPPPCRLQPRPIRNASGKGTRWEEDPFLLAYKECTKSVK--
        MSHRKV SQG++PFSWE+KPG+SK             EAL  + S        ++  +IP PPC +   P R++S KG +W+EDPFLLAYKECTK +K  
Subjt:  MSHRKVLSQGNVPFSWEEKPGVSKFWFP-------DFEALASLQS--------FDGREIPPPPCRLQPRPIRNASGKGTRWEEDPFLLAYKECTKSVK--

Query:  ---NGQFLQTGSKGAVAVVKKSKFFGFSCKSVDSCEIREDGFFNL
           NGQ  + GSK     VKKS F  FSCK+  +CE++++ F  L
Subjt:  ---NGQFLQTGSKGAVAVVKKSKFFGFSCKSVDSCEIREDGFFNL

A0A2P5FS81 Uncharacterized protein4.9e-2244.76Show/hide
Query:  MSHRKVLSQGNVPFSWEEKPGVSKFW-FPDFEALASLQSFD------------GREIPPPPCRLQPRPIRNASGKGTRWEEDPFLLAYKECTKSVK----
        MSHRKV SQG++PFSWE+KPG+SK     ++     +++ D               IP PPC +   P R++S KG +W+EDPFLLAYKECTK +K    
Subjt:  MSHRKVLSQGNVPFSWEEKPGVSKFW-FPDFEALASLQSFD------------GREIPPPPCRLQPRPIRNASGKGTRWEEDPFLLAYKECTKSVK----

Query:  -NGQFLQTGSKGAVAVVKKSKFFGFSCKSVDSCEIREDGFFNL
         NGQ  + G+K     VKKS F  FSCKS  +CE++++ F  L
Subjt:  -NGQFLQTGSKGAVAVVKKSKFFGFSCKSVDSCEIREDGFFNL

W9RVC8 Uncharacterized protein2.0e-2345.81Show/hide
Query:  MSHRKVLSQGNVPFSWEEKPGVSKFWFPD------FEAL----------ASLQSF--------------DGREIPPPPCRLQPRPIRNASGKGTRWEEDP
        M+HRKV SQG++PF WE+KPG+SK    D       +AL          +  Q F              D  +IPPPPC  QP P R++S KG RW+EDP
Subjt:  MSHRKVLSQGNVPFSWEEKPGVSKFWFPD------FEAL----------ASLQSF--------------DGREIPPPPCRLQPRPIRNASGKGTRWEEDP

Query:  FLLAYKECTKSVKNGQFLQTGSKGAVAVVKKSKFFGFSCKSVDSCEIREDGFFNL
        FLLAYKECTK VK G+  +   K +  V+ KS F  FSCK  +SCE+RED F  L
Subjt:  FLLAYKECTKSVKNGQFLQTGSKGAVAVVKKSKFFGFSCKSVDSCEIREDGFFNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCACAGAAAAGTCCTTTCTCAAGGAAATGTTCCCTTTTCATGGGAGGAAAAGCCTGGCGTTTCCAAATTCTGGTTCCCTGATTTTGAAGCCCTTGCCAGCTTGCA
GTCCTTTGACGGAAGAGAGATTCCTCCGCCGCCTTGCCGGTTGCAGCCCCGTCCGATTAGAAACGCCTCCGGCAAGGGAACCCGCTGGGAGGAGGACCCTTTTCTCTTGG
CGTATAAGGAGTGTACAAAAAGTGTCAAAAATGGTCAATTTTTGCAGACGGGAAGTAAAGGAGCTGTTGCTGTTGTGAAGAAGAGTAAGTTTTTTGGCTTTTCTTGTAAA
AGTGTTGATTCTTGTGAAATTAGAGAGGATGGTTTCTTCAACCTTCGTACTTATAGAATTCGTACGTCCACTTGGAAATAG
mRNA sequenceShow/hide mRNA sequence
TCCCTAACGTCTTATTTTCCTTTGCTTGTCAATTATTAAACCTCAAGCCTTCGTCTTCACGTCACATGCTTTTTTCTTCTCCTCCTTTTAAAACACTGTATGAGAGCCTC
TGATTTGTCCCCAAAACAAAACCCCCTTTTTTTAAATTTTAATTTCATCACATTATGAGTCACAGAAAAGTCCTTTCTCAAGGAAATGTTCCCTTTTCATGGGAGGAAAA
GCCTGGCGTTTCCAAATTCTGGTTCCCTGATTTTGAAGCCCTTGCCAGCTTGCAGTCCTTTGACGGAAGAGAGATTCCTCCGCCGCCTTGCCGGTTGCAGCCCCGTCCGA
TTAGAAACGCCTCCGGCAAGGGAACCCGCTGGGAGGAGGACCCTTTTCTCTTGGCGTATAAGGAGTGTACAAAAAGTGTCAAAAATGGTCAATTTTTGCAGACGGGAAGT
AAAGGAGCTGTTGCTGTTGTGAAGAAGAGTAAGTTTTTTGGCTTTTCTTGTAAAAGTGTTGATTCTTGTGAAATTAGAGAGGATGGTTTCTTCAACCTTCGTACTTATAG
AATTCGTACGTCCACTTGGAAATAGGACCTGTGCA
Protein sequenceShow/hide protein sequence
MSHRKVLSQGNVPFSWEEKPGVSKFWFPDFEALASLQSFDGREIPPPPCRLQPRPIRNASGKGTRWEEDPFLLAYKECTKSVKNGQFLQTGSKGAVAVVKKSKFFGFSCK
SVDSCEIREDGFFNLRTYRIRTSTWK