; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0010233 (gene) of Snake gourd v1 genome

Gene IDTan0010233
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGibberellin regulated protein
Genome locationLG11:862587..863083
RNA-Seq ExpressionTan0010233
SyntenyTan0010233
Gene Ontology termsNA
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU15944.1 hypothetical protein TSUD_41670 [Trifolium subterraneum]4.3e-2763.92Show/hide
Query:  MGSLKATKFLAIFLLVLMH--NSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP
        M   K T  LA+  L+L+     YSG+Q M+  SQ IDC GKC YRCS+ SR KIC+RAC  CC RC+CVPPGTSGNRDLCPCYA++TTH GKLKCP
Subjt:  MGSLKATKFLAIFLLVLMH--NSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP

XP_007143651.1 hypothetical protein PHAVU_007G089800g [Phaseolus vulgaris]6.2e-2659.79Show/hide
Query:  MGSLKATKFLAIFLLVLMH--NSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP
        M   + T  +AIF  +LMH    +SG++ M+  + KIDC GKC+YRC KA R K+C+RAC +CC RC+CVPPGTSGN+DLCPCYA +TTH GKLKCP
Subjt:  MGSLKATKFLAIFLLVLMH--NSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP

XP_015886323.1 gibberellin-regulated protein 2-like [Ziziphus jujuba]1.8e-2561.86Show/hide
Query:  MGSLKATKFLAI--FLLVLMHNSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP
        M   KAT   AI  F L++    + G + M++ +QKIDC  KCEYRCSKASR K+C+RAC TCC RC+CVPPGTSGN D+CPCYANMTTH G+ KCP
Subjt:  MGSLKATKFLAI--FLLVLMHNSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP

XP_030461663.1 gibberellin-regulated protein 2-like isoform X1 [Syzygium oleosum]4.3e-2763.92Show/hide
Query:  MGSLKATKFLAIFLLVLMHN--SYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP
        M S K +   AI  +VL+H    + G Q   E +QKIDCK KC YRCSKASR K+C+RAC TCCNRC+CVPPGTSGN D+CPCYANMTTH G+ KCP
Subjt:  MGSLKATKFLAIFLLVLMHN--SYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP

XP_030461664.1 gibberellin-regulated protein 2-like isoform X2 [Syzygium oleosum]6.2e-2664.21Show/hide
Query:  MGSLKATKFLAIFLLVLMHNSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP
        M S K +   AI  +VL+   + G Q   E +QKIDCK KC YRCSKASR K+C+RAC TCCNRC+CVPPGTSGN D+CPCYANMTTH G+ KCP
Subjt:  MGSLKATKFLAIFLLVLMHNSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP

TrEMBL top hitse value%identityAlignment
A0A1S2XY37 gibberellin-regulated protein 2-like1.1e-2565.12Show/hide
Query:  LAIFLLVLMHNSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP
        L  F+L+     Y+G+Q M+  +++IDC GKC YRCSKASR KICMRAC  CC  C+CVPPGTSGNRD+CPCYA++TTH GKLKCP
Subjt:  LAIFLLVLMHNSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP

A0A6A4QBQ1 Putative gibberellin regulated protein1.1e-2558.76Show/hide
Query:  MGSLKATKFLAIFLLVLMH--NSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP
        M   ++T  LAI   +L H      G+Q ++  +Q IDC+GKC+YRCSKASR KIC RAC +CC RC CVPPGT+GN+D+CPCYA +TTH GKLKCP
Subjt:  MGSLKATKFLAIFLLVLMH--NSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP

A0A6P4A0N1 gibberellin-regulated protein 2-like8.7e-2661.86Show/hide
Query:  MGSLKATKFLAI--FLLVLMHNSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP
        M   KAT   AI  F L++    + G + M++ +QKIDC  KCEYRCSKASR K+C+RAC TCC RC+CVPPGTSGN D+CPCYANMTTH G+ KCP
Subjt:  MGSLKATKFLAI--FLLVLMHNSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP

A0A7N0V9C5 Uncharacterized protein7.9e-2760.42Show/hide
Query:  MGSLKATKFLAIFLLVLMHN-SYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP
        MG  K T  L +   VL+H    +  Q ++  ++KIDC  KCEYRC KASR K+C+RAC TCC+RC+CVPPGTSGNR++CPCYANMTTH G+LKCP
Subjt:  MGSLKATKFLAIFLLVLMHN-SYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP

V7BDM6 Uncharacterized protein3.0e-2659.79Show/hide
Query:  MGSLKATKFLAIFLLVLMH--NSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP
        M   + T  +AIF  +LMH    +SG++ M+  + KIDC GKC+YRC KA R K+C+RAC +CC RC+CVPPGTSGN+DLCPCYA +TTH GKLKCP
Subjt:  MGSLKATKFLAIFLLVLMH--NSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP

SwissProt top hitse value%identityAlignment
F4IQJ4 Gibberellin-regulated protein 114.5e-1947.83Show/hide
Query:  LKATKFLAIFLLVLMHNSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP
        L A+  +++ +L  +H     S      + KIDC  +C+ RCS +SR  +C RAC TCC RC+CV PGTSGN D CPCY ++TTH G+ KCP
Subjt:  LKATKFLAIFLLVLMHNSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP

P46687 Gibberellin-regulated protein 36.2e-2148.48Show/hide
Query:  MGSLKATKFLAIFLLVL----MHNSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP
        M   ++T  L + L  L    +H   +    + E   KIDC G+C+ RCSK+SR  +C+RAC +CC RC+CVPPGT+GN  LCPCYA++TT  G+LKCP
Subjt:  MGSLKATKFLAIFLLVL----MHNSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP

P46688 Gibberellin-regulated protein 23.9e-2350.51Show/hide
Query:  MGSLKATKFLAIFLLVL----MHNSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP
        M   ++T  L + ++ L    +H   +    + E   KIDC G+C+ RCSK+SR K+C+RAC +CC+RC+CVPPGTSGN  LCPCYA++TTH G+LKCP
Subjt:  MGSLKATKFLAIFLLVL----MHNSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP

P46689 Gibberellin-regulated protein 11.2e-1947.31Show/hide
Query:  SLKATKFLAIFLLVLMHNSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP
        +L A+  +++ +L L+      SQ    Y++KIDC   C  RC  + R ++C RAC TCC RC+CVPPGT GN D C CYA++TTH G+ KCP
Subjt:  SLKATKFLAIFLLVLMHNSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP

Q93X17 Snakin-21.2e-1959.46Show/hide
Query:  SGSQSMIEYS-QKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP
        S + S   YS +KIDC G C  RC  +SR ++C RAC TCC RC+CVPPGTSGN + CPCYA++TTH  K KCP
Subjt:  SGSQSMIEYS-QKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP

Arabidopsis top hitse value%identityAlignment
AT1G75750.1 GAST1 protein homolog 18.4e-2147.31Show/hide
Query:  SLKATKFLAIFLLVLMHNSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP
        +L A+  +++ +L L+      SQ    Y++KIDC   C  RC  + R ++C RAC TCC RC+CVPPGT GN D C CYA++TTH G+ KCP
Subjt:  SLKATKFLAIFLLVLMHNSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP

AT1G75750.2 GAST1 protein homolog 19.2e-2052.87Show/hide
Query:  LAIFLLVL-MHNSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP
        L I LLVL +  +   SQ    Y++KIDC   C  RC  + R ++C RAC TCC RC+CVPPGT GN D C CYA++TTH G+ KCP
Subjt:  LAIFLLVL-MHNSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP

AT2G18420.1 Gibberellin-regulated family protein3.2e-2047.83Show/hide
Query:  LKATKFLAIFLLVLMHNSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP
        L A+  +++ +L  +H     S      + KIDC  +C+ RCS +SR  +C RAC TCC RC+CV PGTSGN D CPCY ++TTH G+ KCP
Subjt:  LKATKFLAIFLLVLMHNSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP

AT4G09600.1 GAST1 protein homolog 34.4e-2248.48Show/hide
Query:  MGSLKATKFLAIFLLVL----MHNSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP
        M   ++T  L + L  L    +H   +    + E   KIDC G+C+ RCSK+SR  +C+RAC +CC RC+CVPPGT+GN  LCPCYA++TT  G+LKCP
Subjt:  MGSLKATKFLAIFLLVL----MHNSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP

AT4G09610.1 GAST1 protein homolog 22.8e-2450.51Show/hide
Query:  MGSLKATKFLAIFLLVL----MHNSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP
        M   ++T  L + ++ L    +H   +    + E   KIDC G+C+ RCSK+SR K+C+RAC +CC+RC+CVPPGTSGN  LCPCYA++TTH G+LKCP
Subjt:  MGSLKATKFLAIFLLVL----MHNSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTCCCTCAAGGCAACAAAATTCCTGGCAATTTTTTTGCTTGTACTCATGCACAATAGCTATAGTGGGTCTCAATCTATGATTGAATATTCCCAAAAGATAGACTG
CAAAGGAAAGTGCGAGTATAGATGCAGCAAGGCTTCAAGGTTGAAGATTTGCATGAGAGCTTGTGTGACGTGCTGCAATAGATGCCATTGCGTCCCGCCGGGAACTTCCG
GCAACCGAGACCTCTGCCCTTGCTATGCCAACATGACTACTCACGATGGCAAGCTCAAATGCCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCTCCCTCAAGGCAACAAAATTCCTGGCAATTTTTTTGCTTGTACTCATGCACAATAGCTATAGTGGGTCTCAATCTATGATTGAATATTCCCAAAAGATAGACTG
CAAAGGAAAGTGCGAGTATAGATGCAGCAAGGCTTCAAGGTTGAAGATTTGCATGAGAGCTTGTGTGACGTGCTGCAATAGATGCCATTGCGTCCCGCCGGGAACTTCCG
GCAACCGAGACCTCTGCCCTTGCTATGCCAACATGACTACTCACGATGGCAAGCTCAAATGCCCTTGA
Protein sequenceShow/hide protein sequence
MGSLKATKFLAIFLLVLMHNSYSGSQSMIEYSQKIDCKGKCEYRCSKASRLKICMRACVTCCNRCHCVPPGTSGNRDLCPCYANMTTHDGKLKCP