CuGenDBv2

Gene ID	Tan0010236
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Multidrug resistance protein ABC transporter family protein, putative
Genome location	LG06:5670690..5671887
RNA-Seq Expression	Tan0010236
Synteny	Tan0010236
Gene Ontology terms	GO:0006810 - transport (biological process)
InterPro domains	IPR025322 - Protein of unknown function DUF4228, plant

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6575773.1 hypothetical protein SDJN03_26412, partial [Cucurbita argyrosperma subsp. sororia]

6.4e-70

76.38

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Query:  MGNVTSVSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEIR-STVAGKRPTPLPADEKLDLKKVYMMLPIKGGKPTSLSSEEIHRILQCVNSALRS
        MGNVTSVS VGKVVLSNGS+HEFNEPLT AELMLEHPR VVVE+R ST+A KRPTPLPAD KLDLKKVYMMLPI+GGKP SLSSEEI R++ C NSALRS
Subjt:  MGNVTSVSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEIR-STVAGKRPTPLPADEKLDLKKVYMMLPIKGGKPTSLSSEEIHRILQCVNSALRS

Query:  RSLFLSSSKVLPWFARACTTTTATTTKGATRVEIKNEEDHNHIEIGGEESSWETE---TAEGRPEYLSRQLSGRGWKPSLDTIKEKKMERKFSHWLFKF
        RSL LSSSKVLPW ARA + TT T T GA  V++K +ED   I   GEE  WETE    AEGRPEYLSRQLSG+ WKPSLDTIKEKK E+K SHWLFKF
Subjt:  RSLFLSSSKVLPWFARACTTTTATTTKGATRVEIKNEEDHNHIEIGGEESSWETE---TAEGRPEYLSRQLSGRGWKPSLDTIKEKKMERKFSHWLFKF

KAG7014321.1 hypothetical protein SDJN02_24498, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.2e-70

76.88

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Query:  MGNVTSVSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEIR-STVAGKRPTPLPADEKLDLKKVYMMLPIKGGKPTSLSSEEIHRILQCVNSALRS
        MGNVTSVS VGKVVLSNGS+HEFNEPLT AELMLEHPR VVVE+R STVA KRPTPLPAD KLDLKKVYMMLPI+GGKP SLSSEEI R++ C NSALRS
Subjt:  MGNVTSVSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEIR-STVAGKRPTPLPADEKLDLKKVYMMLPIKGGKPTSLSSEEIHRILQCVNSALRS

Query:  RSLFLSSSKVLPWFARACTTTTATTTKGATRVEIKNEEDHNHIEIGGEESSWETE---TAEGRPEYLSRQLSGRGWKPSLDTIKEKKMERKFSHWLFKF
        RSL LSSSKVLPW ARA + TT TTT GA  V++K ++D   I   GEE  WETE    AEGRPEYLSRQLSG+ WKPSLDTIKEKK E+K SHWLFKF
Subjt:  RSLFLSSSKVLPWFARACTTTTATTTKGATRVEIKNEEDHNHIEIGGEESSWETE---TAEGRPEYLSRQLSGRGWKPSLDTIKEKKMERKFSHWLFKF

XP_004135994.1 uncharacterized protein LOC101221516 [Cucumis sativus]

2.9e-70

76.38

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Query:  MGNVTS-VSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEI-RSTVAGKRPTPLPADEKLDLKKVYMMLPIKGGKPTSLSSEEIHRILQCVNSALR
        MGNVTS VS VGKVVLSNGS+ EFNEP T AELMLEHPRQVVVEI +STV GKRPTPLPADEKL+  KVYMMLPI+GGKP SLSSE+I R+L C NSALR
Subjt:  MGNVTS-VSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEI-RSTVAGKRPTPLPADEKLDLKKVYMMLPIKGGKPTSLSSEEIHRILQCVNSALR

Query:  SRSLFLSSSKVLPWFARAC--TTTTATTTKGATRVEIKNEEDHNHIEIGGEESSWETETAEGRPEYLSRQLSGRGWKPSLDTIKEKKMERKFSHWLFKF
        SRSL LSSSKVLPWFARAC  TTTTA+TT    R + K E D   +++ GEE  W  ET EGRPEYLSRQLSGRGWKPSLDTIKEKK E+K SHWLFKF
Subjt:  SRSLFLSSSKVLPWFARAC--TTTTATTTKGATRVEIKNEEDHNHIEIGGEESSWETETAEGRPEYLSRQLSGRGWKPSLDTIKEKKMERKFSHWLFKF

XP_008451489.1 PREDICTED: uncharacterized protein LOC103492763 [Cucumis melo]

1.3e-70

76.88

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Query:  MGNVTS-VSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEI-RSTVAGKRPTPLPADEKLDLKKVYMMLPIKGGKPTSLSSEEIHRILQCVNSALR
        MGNVTS VS VGKVVLSNGS+ EFNEP T AELMLEHPRQVVVEI +STV GKRPTPLPADEKL+  KVYMMLPI+GGKP SLSSE+I R+L C NSALR
Subjt:  MGNVTS-VSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEI-RSTVAGKRPTPLPADEKLDLKKVYMMLPIKGGKPTSLSSEEIHRILQCVNSALR

Query:  SRSLFLSSSKVLPWFARAC--TTTTATTTKGATRVEIKNEEDHNHIEIGGEESSWETETAEGRPEYLSRQLSGRGWKPSLDTIKEKKMERKFSHWLFKF
        SRSL LSSSKVLPWFARAC  TTT  TTT    R EIK E D   +++ GEE  W  ETAEGRPEYLSRQLSGRGWKPSLDTIKEKK+E+K SHWLF F
Subjt:  SRSLFLSSSKVLPWFARAC--TTTTATTTKGATRVEIKNEEDHNHIEIGGEESSWETETAEGRPEYLSRQLSGRGWKPSLDTIKEKKMERKFSHWLFKF

XP_038899617.1 uncharacterized protein LOC120086875 [Benincasa hispida]

8.4e-70

75.13

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Query:  MGNVTSVSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEI-RSTVAGKRPTPLPADEKLDLKKVYMMLPIKGGKPTSLSSEEIHRILQCVNSALRS
        MGNVT VS +G+VVLS+GS+ +FNEP TAAELMLEHPRQVVVEI +ST+  KR TPLPADEKLD KKVYMMLPI+GGKP SLSSEEI R+L C NSALRS
Subjt:  MGNVTSVSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEI-RSTVAGKRPTPLPADEKLDLKKVYMMLPIKGGKPTSLSSEEIHRILQCVNSALRS

Query:  RSLFLSSSKVLPWFARACTTTTATTTKGATRVEIKNEEDHNHIEIGGEESSWETE-TAEGRPEYLSRQLSGRGWKPSLDTIKEKKMERKFSHWLFKF
        RSL LSSSKVLPWFARA T+ T TTT+   +VEIK E+    ++I GEE  WETE  AEGRPEYLSRQLSGRGWKPSLDTIKEKK E+K+SHWLF F
Subjt:  RSLFLSSSKVLPWFARACTTTTATTTKGATRVEIKNEEDHNHIEIGGEESSWETE-TAEGRPEYLSRQLSGRGWKPSLDTIKEKKMERKFSHWLFKF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K6C6 Uncharacterized protein

1.4e-70

76.38

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Query:  MGNVTS-VSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEI-RSTVAGKRPTPLPADEKLDLKKVYMMLPIKGGKPTSLSSEEIHRILQCVNSALR
        MGNVTS VS VGKVVLSNGS+ EFNEP T AELMLEHPRQVVVEI +STV GKRPTPLPADEKL+  KVYMMLPI+GGKP SLSSE+I R+L C NSALR
Subjt:  MGNVTS-VSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEI-RSTVAGKRPTPLPADEKLDLKKVYMMLPIKGGKPTSLSSEEIHRILQCVNSALR

Query:  SRSLFLSSSKVLPWFARAC--TTTTATTTKGATRVEIKNEEDHNHIEIGGEESSWETETAEGRPEYLSRQLSGRGWKPSLDTIKEKKMERKFSHWLFKF
        SRSL LSSSKVLPWFARAC  TTTTA+TT    R + K E D   +++ GEE  W  ET EGRPEYLSRQLSGRGWKPSLDTIKEKK E+K SHWLFKF
Subjt:  SRSLFLSSSKVLPWFARAC--TTTTATTTKGATRVEIKNEEDHNHIEIGGEESSWETETAEGRPEYLSRQLSGRGWKPSLDTIKEKKMERKFSHWLFKF

A0A1S3BSP6 uncharacterized protein LOC103492763

6.3e-71

76.88

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Query:  MGNVTS-VSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEI-RSTVAGKRPTPLPADEKLDLKKVYMMLPIKGGKPTSLSSEEIHRILQCVNSALR
        MGNVTS VS VGKVVLSNGS+ EFNEP T AELMLEHPRQVVVEI +STV GKRPTPLPADEKL+  KVYMMLPI+GGKP SLSSE+I R+L C NSALR
Subjt:  MGNVTS-VSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEI-RSTVAGKRPTPLPADEKLDLKKVYMMLPIKGGKPTSLSSEEIHRILQCVNSALR

Query:  SRSLFLSSSKVLPWFARAC--TTTTATTTKGATRVEIKNEEDHNHIEIGGEESSWETETAEGRPEYLSRQLSGRGWKPSLDTIKEKKMERKFSHWLFKF
        SRSL LSSSKVLPWFARAC  TTT  TTT    R EIK E D   +++ GEE  W  ETAEGRPEYLSRQLSGRGWKPSLDTIKEKK+E+K SHWLF F
Subjt:  SRSLFLSSSKVLPWFARAC--TTTTATTTKGATRVEIKNEEDHNHIEIGGEESSWETETAEGRPEYLSRQLSGRGWKPSLDTIKEKKMERKFSHWLFKF

A0A6J1DD99 uncharacterized protein LOC111019977

2.0e-69

75.51

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Query:  MGNVTSVSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEIRSTVAGKRPTPLPADEKLDLKKVYMMLPIKGGKPTSLSSEEIHRILQCVNSALRSR
        MGN TS S  GKVVLS+GSV E NE LTAAELMLEHPRQVVVEI ST+AGKRPT LPADEKLDLKKVY+MLPI+GGKP SLSSEEI RIL C NS LR  
Subjt:  MGNVTSVSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEIRSTVAGKRPTPLPADEKLDLKKVYMMLPIKGGKPTSLSSEEIHRILQCVNSALRSR

Query:  SLFLSSSKVLPWFARACTTTTATTTKGATRVEIKNEEDHNHIEIGGEESSWETE-TAEGRPEYLSRQLSGRGWKPSLDTIKEKKMERKFSHWLFKF
        SLF SSSKVLPWFAR CTTTTATT  G   V++K  ++       GEE+ WETE  AEGRPEYLSRQ SGRGWKPSLDTIKEKK E+K SHWLFKF
Subjt:  SLFLSSSKVLPWFARACTTTTATTTKGATRVEIKNEEDHNHIEIGGEESSWETE-TAEGRPEYLSRQLSGRGWKPSLDTIKEKKMERKFSHWLFKF

A0A6J1GN59 uncharacterized protein LOC111455974

2.6e-69

73.87

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Query:  MGNVTSVSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEIRST-VAGKRPTPLPADEKLDLKKVYMMLPIKGGKPTSLSSEEIHRILQCVNSALRS
        MGNVTSVS VGK+VLS+GS+HEFNEPLT AELMLEHPR VVVE+RS+ V  KRPTPLPAD KLDLKKVYMMLPI+GGKP SLSSEEI R++ C NSALRS
Subjt:  MGNVTSVSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEIRST-VAGKRPTPLPADEKLDLKKVYMMLPIKGGKPTSLSSEEIHRILQCVNSALRS

Query:  RSLFLSSSKVLPWFARACTTTTATTTKGATRVEIKNEEDHNHIEIGGEESSWETE---TAEGRPEYLSRQLSGRGWKPSLDTIKEKKMERKFSHWLFKF
        RSL LSSSKVLPW ARA + TT TTT GA  V++K ++    + + GEE  WETE    AEGRPEYLSRQLSG+ WKPSLDTIKEKK E+K SHWLFKF
Subjt:  RSLFLSSSKVLPWFARACTTTTATTTKGATRVEIKNEEDHNHIEIGGEESSWETE---TAEGRPEYLSRQLSGRGWKPSLDTIKEKKMERKFSHWLFKF

A0A6J1JQZ4 uncharacterized protein LOC111488113

1.1e-67

74.87

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Query:  MGNVTSVSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEIR-STVAGKRPTPLPADEKLDLKKVYMMLPIKGGKPTSLSSEEIHRILQCVNSALRS
        MGNVTSVS VGKVVLS+GS+HEFNEPLT AELMLEHPR VVVE+R STVA KRPTPLPAD KLDLKKVYMMLPI+GGKP SLSSEEI  +L C NSALRS
Subjt:  MGNVTSVSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEIR-STVAGKRPTPLPADEKLDLKKVYMMLPIKGGKPTSLSSEEIHRILQCVNSALRS

Query:  RSLFLSSSKVLPWFARACTTTTATTTKGATRVEIKNEEDHNHIEIGGEESSWETE---TAEGRPEYLSRQLSGRGWKPSLDTIKEKKMERKFSHWLFKF
        RSL LSSSKVLPW ARA + TT     GA  V++K ++D   I   GEE  WETE    AEGRPEYLSRQLSG+ WKPSLDTIKEKK E+K SHWLFKF
Subjt:  RSLFLSSSKVLPWFARACTTTTATTTKGATRVEIKNEEDHNHIEIGGEESSWETE---TAEGRPEYLSRQLSGRGWKPSLDTIKEKKMERKFSHWLFKF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G02090.1 unknown protein

3.7e-23

38.81

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Query:  GKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEI---------RSTVAGKRPTPLPADEKLDLKKVYMMLPIK--GGKPTS-----LSSEEIHRILQCVN
        GKVVLS+G V    E  T AE+MLE+P+ VVVE           +    ++  PLPAD+ L+  K+Y++LP K  GG+        L+SEE+ ++L    
Subjt:  GKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEI---------RSTVAGKRPTPLPADEKLDLKKVYMMLPIK--GGKPTS-----LSSEEIHRILQCVN

Query:  SALRSRSLFLSSSKVLPWFAR--------ACTTTTATTTKGATRVEIKNEEDHNHIEIGGEESSWETETAEGRPEYLSRQLSGRGWKPSLDTIKEKKMER
        + +RS   F     +LPWF          A  T  A T+ G  R+E + EE                   E RPE+LSRQLSGRGWKPSLD I+EKK ++
Subjt:  SALRSRSLFLSSSKVLPWFAR--------ACTTTTATTTKGATRVEIKNEEDHNHIEIGGEESSWETETAEGRPEYLSRQLSGRGWKPSLDTIKEKKMER

Query:  K
        K
Subjt:  K

AT5G17350.1 unknown protein

1.2e-05

25.82

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Query:  TSVSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEIRSTVAGKRPTPLPADEKLDLK--KVYMMLPIKGGKPTSLSSEEIHRILQCVNSALRSRSL
        +S S   KV+L +G V   + P+ AAELM+E P   +V+ +S   G++  PL AD+ L +K   VY+  P+     ++ ++ ++ R+        R R  
Subjt:  TSVSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEIRSTVAGKRPTPLPADEKLDLK--KVYMMLPIKGGKPTSLSSEEIHRILQCVNSALRSRSL

Query:  FLSSSKVLPWFARACTTTTATTTKGATRVEIKNEEDHNHIEIGGEESSWETETAEGRPEYLSRQLSGRGWKPSLDTIKEKKM
           SS  +    + C            RV    E D   +   G + + E        E++ R    +  KP L+TI E+ +
Subjt:  FLSSSKVLPWFARACTTTTATTTKGATRVEIKNEEDHNHIEIGGEESSWETETAEGRPEYLSRQLSGRGWKPSLDTIKEKKM

Sequences

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CDS sequence

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ATGGGCAACGTCACCTCCGTCTCCGTCGTCGGAAAAGTCGTTCTCTCTAACGGTTCCGTCCATGAGTTCAATGAGCCATTGACGGCGGCCGAGCTCATGCTCGAACACCC
ACGACAGGTTGTCGTGGAGATTCGCTCGACTGTTGCTGGGAAACGACCGACTCCGTTACCAGCTGACGAGAAACTCGATTTGAAAAAGGTTTACATGATGTTACCGATAA
AAGGAGGCAAGCCAACATCATTGTCGTCTGAGGAAATCCATCGCATTCTTCAATGTGTCAACTCAGCTCTACGATCACGCTCTCTCTTCCTATCTTCTTCTAAGGTTCTT
CCTTGGTTTGCGAGGGCATGCACAACAACAACTGCGACGACGACGAAGGGAGCGACCCGAGTGGAGATTAAGAATGAAGAAGATCATAATCACATAGAGATTGGAGGAGA
GGAAAGTAGCTGGGAAACGGAGACGGCGGAGGGGAGGCCGGAGTATTTGAGCAGACAATTATCCGGCAGAGGTTGGAAGCCAAGCTTGGATACGATTAAGGAGAAGAAAA
TGGAGAGGAAATTTTCTCATTGGCTGTTCAAATTTTGA

mRNA sequence

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CAAACTCCTTCCCTTTTACATCTCTTCTTATTTCATTCCTTCCTTTCTCCTCCTCAGCTCACTTACTATCATCCTCCCATGGGCAACGTCACCTCCGTCTCCGTCGTCGG
AAAAGTCGTTCTCTCTAACGGTTCCGTCCATGAGTTCAATGAGCCATTGACGGCGGCCGAGCTCATGCTCGAACACCCACGACAGGTTGTCGTGGAGATTCGCTCGACTG
TTGCTGGGAAACGACCGACTCCGTTACCAGCTGACGAGAAACTCGATTTGAAAAAGGTTTACATGATGTTACCGATAAAAGGAGGCAAGCCAACATCATTGTCGTCTGAG
GAAATCCATCGCATTCTTCAATGTGTCAACTCAGCTCTACGATCACGCTCTCTCTTCCTATCTTCTTCTAAGGTTCTTCCTTGGTTTGCGAGGGCATGCACAACAACAAC
TGCGACGACGACGAAGGGAGCGACCCGAGTGGAGATTAAGAATGAAGAAGATCATAATCACATAGAGATTGGAGGAGAGGAAAGTAGCTGGGAAACGGAGACGGCGGAGG
GGAGGCCGGAGTATTTGAGCAGACAATTATCCGGCAGAGGTTGGAAGCCAAGCTTGGATACGATTAAGGAGAAGAAAATGGAGAGGAAATTTTCTCATTGGCTGTTCAAA
TTTTGAAAGGGATTTGGAAGCCATTAATGGCATTGAATGTGCATTATTATTATTAAGAACCTTTCAAATATTATGAAAATATATGTGAAAAAAATAGAGTTAATGTGTTA
AATGTCTTAGAAGTTTCTTGTTTTTGTAAATTTATGTTGTGG

Protein sequence

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MGNVTSVSVVGKVVLSNGSVHEFNEPLTAAELMLEHPRQVVVEIRSTVAGKRPTPLPADEKLDLKKVYMMLPIKGGKPTSLSSEEIHRILQCVNSALRSRSLFLSSSKVL
PWFARACTTTTATTTKGATRVEIKNEEDHNHIEIGGEESSWETETAEGRPEYLSRQLSGRGWKPSLDTIKEKKMERKFSHWLFKF

Tan0010236 (gene) of Snake gourd v1 genome