; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0010280 (gene) of Snake gourd v1 genome

Gene IDTan0010280
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRNA-binding family protein
Genome locationLG09:58765097..58774260
RNA-Seq ExpressionTan0010280
SyntenyTan0010280
Gene Ontology termsGO:0008380 - RNA splicing (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0035145 - exon-exon junction complex (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR008111 - RNA-binding motif protein 8
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR033744 - RBM8, RNA recognition motif
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139049.1 RNA-binding protein Y14 [Cucumis sativus]7.1e-10198.48Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLPGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSL GGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLPGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWAFSHGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQI+NVDWAFSHGPIRRKN RPARERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWAFSHGPIRRKNTRPARERRSRSPRRRY

XP_022154366.1 RNA-binding protein Y14A [Momordica charantia]4.3e-9896.45Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLPGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSL  GPKKTKGRGFR+ESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLPGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWAFSHGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAE+AISAMDG+ELLTQI+NVDWAFSHGPIRRKNTRP RERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWAFSHGPIRRKNTRPARERRSRSPRRRY

XP_022961208.1 RNA-binding protein Y14-like [Cucurbita moschata]1.8e-9996.45Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLPGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSL GGPKKTKGRGFREESDRNTRL GSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLPGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWAFSHGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEI+NLHLNLDRRTGFVKGYALIEYE+FEEAEKAISAMDG+ELLTQI+NVDWAFSHGPIRRKNTRP RERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWAFSHGPIRRKNTRPARERRSRSPRRRY

XP_022988215.1 RNA-binding protein Y14A-like [Cucurbita maxima]2.5e-9895.43Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLPGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASP APFPKLKSAITGGASSSL GGPKKTKGRGFR+ESDRNTRL GSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLPGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWAFSHGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEI+NLHLNLDRRTGFVKGYALIEYE+FEEAEKAISAMDG+ELLTQI+NVDWAFSHGPIRRKNTRP RERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWAFSHGPIRRKNTRPARERRSRSPRRRY

XP_038880227.1 RNA-binding protein Y14A [Benincasa hispida]9.3e-10197.97Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLPGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSL GGPKKTKGRGFR+ESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLPGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWAFSHGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQNAFG+FGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQI+NVDWAFSHGPIRRKNTRPARERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWAFSHGPIRRKNTRPARERRSRSPRRRY

TrEMBL top hitse value%identityAlignment
A0A0A0M2V3 RRM domain-containing protein3.5e-10198.48Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLPGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSL GGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLPGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWAFSHGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQI+NVDWAFSHGPIRRKN RPARERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWAFSHGPIRRKNTRPARERRSRSPRRRY

A0A1S3BNH9 RNA-binding protein 8A-B3.5e-10198.48Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLPGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSL GGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLPGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWAFSHGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQI+NVDWAFSHGPIRRKN RPARERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWAFSHGPIRRKNTRPARERRSRSPRRRY

A0A6J1DNH7 RNA-binding protein Y14A2.1e-9896.45Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLPGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSL  GPKKTKGRGFR+ESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLPGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWAFSHGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAE+AISAMDG+ELLTQI+NVDWAFSHGPIRRKNTRP RERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWAFSHGPIRRKNTRPARERRSRSPRRRY

A0A6J1HB67 RNA-binding protein Y14-like8.5e-10096.45Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLPGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSL GGPKKTKGRGFREESDRNTRL GSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLPGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWAFSHGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEI+NLHLNLDRRTGFVKGYALIEYE+FEEAEKAISAMDG+ELLTQI+NVDWAFSHGPIRRKNTRP RERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWAFSHGPIRRKNTRPARERRSRSPRRRY

A0A6J1JIZ0 RNA-binding protein Y14A-like1.2e-9895.43Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLPGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT
        MASADVEAVDFEPEEDDLMDEDGAAEADASP APFPKLKSAITGGASSSL GGPKKTKGRGFR+ESDRNTRL GSDFDSLKSADGPGPQRSIEGWIILVT
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLPGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVT

Query:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWAFSHGPIRRKNTRPARERRSRSPRRRY
        GVHEEAQEDDLQNAFGEFGEI+NLHLNLDRRTGFVKGYALIEYE+FEEAEKAISAMDG+ELLTQI+NVDWAFSHGPIRRKNTRP RERRSRSPRRRY
Subjt:  GVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWAFSHGPIRRKNTRPARERRSRSPRRRY

SwissProt top hitse value%identityAlignment
B7FAL5 RNA-binding protein Y14A5.0e-6566.83Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLPG--GPKKTKGRGFREE-SDRNTRLAG----SDFDSLKSADGPGPQRSIE
        + +ADVEAVDF+P++DDLMDED    AD +P AP P+L+S I GG      G  G +KTKGRGFR++ + R++RLAG    SDFDSL S  GPGP RSIE
Subjt:  MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLPG--GPKKTKGRGFREE-SDRNTRLAG----SDFDSLKSADGPGPQRSIE

Query:  GWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWAFSHGPIRRKNTRPARERRSRS-
        GWI+LVTGVHEEAQEDDL N F +FG++KNLHLNLDRRTGFVKGYALIEYE+FEEA+ AI A+DG ELLTQI++VDWAFS+GP++R+N R    RRSRS 
Subjt:  GWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWAFSHGPIRRKNTRPARERRSRS-

Query:  PRRRY
        PRRRY
Subjt:  PRRRY

F4I9J7 RNA-binding protein Y142.3e-6568.45Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAA--EADASPRAPFPKLKSAITGGASSSLPGGPKKTKGRGFREE--SDRNTRLAGSDFDSLKSADGPGPQRSIEGWI
        MA+ + EAVDFEPEEDDLMDE+G A   AD SPRA  P+LKSAI G    S     KKTKGRGFREE  SDR  RL+  DF+SL S   PGPQRS+EGWI
Subjt:  MASADVEAVDFEPEEDDLMDEDGAA--EADASPRAPFPKLKSAITGGASSSLPGGPKKTKGRGFREE--SDRNTRLAGSDFDSLKSADGPGPQRSIEGWI

Query:  ILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWAFSHGP-----IRRKNTRPARERRSR
        ILV+GVHEE QE+D+ NAFG+FGEIKNL+LNLDRR+G+VKGYALIEYE  EEA+ AISAM+GAELLTQ ++VDWAFS GP      RRKN+R  R +RSR
Subjt:  ILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWAFSHGP-----IRRKNTRPARERRSR

Query:  SPRRRY
        SPRRRY
Subjt:  SPRRRY

Q28BZ1 RNA-binding protein 8A3.1e-3856.64Show/hide
Query:  KKTKGRGFREESDRNTRLAGSDFDSL-KSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAI
        KK KGRGF  +     R+   D+DS+ +  D PGPQRS+EGWI+ VTGVHEEA E+D+ + FGEFGEIKN+HLNLDRRTGF+KGYAL+EYE+++EA  A+
Subjt:  KKTKGRGFREESDRNTRLAGSDFDSL-KSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAI

Query:  SAMDGAELLTQILNVDWAFSHGPIRRKNTRPARERRSRSPRRR
          ++G +L+ Q ++VDW F  GP   K  R +  RRSRSP RR
Subjt:  SAMDGAELLTQILNVDWAFSHGPIRRKNTRPARERRSRSPRRR

Q6ATR0 RNA-binding protein Y14B9.5e-4049.26Show/hide
Query:  ASADVEAVDF---EPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLPGGPKKTKGRGFREESDRNTRLAGSD---FDSLKSADGP--GPQRSIE
        A+ DVE VD+   E EE+D MDED           P P + S            G  +++GR       R+T +  S+   FDSL  A  P  GPQRSIE
Subjt:  ASADVEAVDF---EPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLPGGPKKTKGRGFREESDRNTRLAGSD---FDSLKSADGP--GPQRSIE

Query:  GWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWAFSHGPIRRKNTRPARERRSRSP
        GWI+LV+GV E+A+EDDL N F +FG +K+LHLNL+RRTG+ KGYAL+EYESFEEA+ AI AM+G +LLT+ + VDWAFS GPI++  +     RRSR+P
Subjt:  GWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWAFSHGPIRRKNTRPARERRSRSP

Query:  RRR
         RR
Subjt:  RRR

Q6PH90 RNA-binding protein 8A-B1.1e-3857.34Show/hide
Query:  KKTKGRGFREESDRNTRLAGSDFDSL-KSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAI
        KK KGRGF  +    TR+   D+DS+ +  D PGPQRS+EGWI+ VTGVHEEA E+D+ + FGEFGEIKN+HLNLDRRTGF+KGYAL+EYE+++EA  A+
Subjt:  KKTKGRGFREESDRNTRLAGSDFDSL-KSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAI

Query:  SAMDGAELLTQILNVDWAFSHGPIRRKNTRPARERRSRSPRRR
          ++G +L+ Q ++VDW F  GP   K  R +  RRSRSP RR
Subjt:  SAMDGAELLTQILNVDWAFSHGPIRRKNTRPARERRSRSPRRR

Arabidopsis top hitse value%identityAlignment
AT1G51510.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.6e-6668.45Show/hide
Query:  MASADVEAVDFEPEEDDLMDEDGAA--EADASPRAPFPKLKSAITGGASSSLPGGPKKTKGRGFREE--SDRNTRLAGSDFDSLKSADGPGPQRSIEGWI
        MA+ + EAVDFEPEEDDLMDE+G A   AD SPRA  P+LKSAI G    S     KKTKGRGFREE  SDR  RL+  DF+SL S   PGPQRS+EGWI
Subjt:  MASADVEAVDFEPEEDDLMDEDGAA--EADASPRAPFPKLKSAITGGASSSLPGGPKKTKGRGFREE--SDRNTRLAGSDFDSLKSADGPGPQRSIEGWI

Query:  ILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWAFSHGP-----IRRKNTRPARERRSR
        ILV+GVHEE QE+D+ NAFG+FGEIKNL+LNLDRR+G+VKGYALIEYE  EEA+ AISAM+GAELLTQ ++VDWAFS GP      RRKN+R  R +RSR
Subjt:  ILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWAFSHGP-----IRRKNTRPARERRSR

Query:  SPRRRY
        SPRRRY
Subjt:  SPRRRY

AT3G11400.1 eukaryotic translation initiation factor 3G12.3e-0931.31Show/hide
Query:  AGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWA
        AG+D    +SA G   +R  +   + VT + E+ +E DL   F  FG +  +++ +D++TG  +G+  + + S E+A++AI+ ++G      IL V+WA
Subjt:  AGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWA

AT3G11400.2 eukaryotic translation initiation factor 3G12.3e-0931.31Show/hide
Query:  AGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWA
        AG+D    +SA G   +R  +   + VT + E+ +E DL   F  FG +  +++ +D++TG  +G+  + + S E+A++AI+ ++G      IL V+WA
Subjt:  AGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWA

AT5G64200.1 ortholog of human splicing factor SC352.0e-0830.77Show/hide
Query:  GPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWAFSHGPIRRKNTR---
        GP    + + +LV  +      DDL   F ++G++ ++ +  DRRTG  +G+A + Y+  +EA KA+  +DG  +  + + V +A  +GP   K ++   
Subjt:  GPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWAFSHGPIRRKNTR---

Query:  -----PARERRSRSPRR
              +R  RSRSPRR
Subjt:  -----PARERRSRSPRR

AT5G64200.2 ortholog of human splicing factor SC352.0e-0830.77Show/hide
Query:  GPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWAFSHGPIRRKNTR---
        GP    + + +LV  +      DDL   F ++G++ ++ +  DRRTG  +G+A + Y+  +EA KA+  +DG  +  + + V +A  +GP   K ++   
Subjt:  GPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWAFSHGPIRRKNTR---

Query:  -----PARERRSRSPRR
              +R  RSRSPRR
Subjt:  -----PARERRSRSPRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGCGCTGATGTAGAGGCTGTCGACTTTGAGCCCGAAGAAGACGACCTCATGGACGAGGATGGAGCCGCCGAAGCCGATGCCTCCCCACGAGCTCCTTTTCCTAA
GCTCAAATCCGCCATTACTGGCGGCGCATCTTCCTCGCTGCCCGGTGGTCCGAAGAAGACCAAGGGTCGTGGATTTCGAGAAGAGTCTGATCGTAACACCCGCCTTGCTG
GGTCGGACTTCGATTCCCTCAAGTCGGCTGATGGTCCTGGCCCCCAACGATCTATTGAAGGATGGATCATTCTGGTAACTGGTGTACATGAAGAGGCACAGGAGGATGAT
CTACAAAATGCATTTGGTGAGTTTGGGGAGATAAAGAATTTGCATCTTAATCTCGATCGCCGTACTGGGTTTGTCAAGGGATATGCATTGATCGAATACGAGAGCTTTGA
GGAAGCAGAGAAAGCAATATCTGCCATGGATGGCGCTGAACTTCTGACCCAAATTCTCAATGTTGATTGGGCATTCAGCCATGGACCCATCAGAAGGAAGAACACAAGAC
CCGCTCGGGAACGACGTTCGAGGAGCCCAAGGAGGAGATATTGA
mRNA sequenceShow/hide mRNA sequence
GGAAAATAAAAATAAAAGACGAAAGAGAATAAATCTAACAAAAAAAAAAAGGTTGGGTTAGCGGGCAAACCAGAAACCCTTGTTTCGATCCCCAAAAACCCCACCATTCC
CATCTTCTCTTCCCTCCCATTTTCCCTTTTAGCATTTTGCAGAACCGATTTGGAGCTCTGAGACACCACCTTGGTTAGCTATGGCGAGCGCTGATGTAGAGGCTGTCGAC
TTTGAGCCCGAAGAAGACGACCTCATGGACGAGGATGGAGCCGCCGAAGCCGATGCCTCCCCACGAGCTCCTTTTCCTAAGCTCAAATCCGCCATTACTGGCGGCGCATC
TTCCTCGCTGCCCGGTGGTCCGAAGAAGACCAAGGGTCGTGGATTTCGAGAAGAGTCTGATCGTAACACCCGCCTTGCTGGGTCGGACTTCGATTCCCTCAAGTCGGCTG
ATGGTCCTGGCCCCCAACGATCTATTGAAGGATGGATCATTCTGGTAACTGGTGTACATGAAGAGGCACAGGAGGATGATCTACAAAATGCATTTGGTGAGTTTGGGGAG
ATAAAGAATTTGCATCTTAATCTCGATCGCCGTACTGGGTTTGTCAAGGGATATGCATTGATCGAATACGAGAGCTTTGAGGAAGCAGAGAAAGCAATATCTGCCATGGA
TGGCGCTGAACTTCTGACCCAAATTCTCAATGTTGATTGGGCATTCAGCCATGGACCCATCAGAAGGAAGAACACAAGACCCGCTCGGGAACGACGTTCGAGGAGCCCAA
GGAGGAGATATTGATTTTGAGGTGTAAAACTCCATGTGTGGTGTTTATGGATTTTAATTGGGAAGCTGTTTTCTTGTGGATTGGATTAGGAGGTGTTTCTACTGAGCTCT
TTCTCAACTGTCTCAAGATCCCCCCTGGTTTCCAGGTTTCCAGCCCCTTTTTTCTCGGACGTTGATTTGGATTGATGTATGTAACTTAGAGGACCTGAGTTTTATGATTT
TTCCCTTTTTTGGATTACTTGAGGTTTATGCCTTTTTGTGTTGTTGATACTTGCTATTATACATATTTTTTGTTCCAAATTTGGCTTTTAATGTGTGGCTTTTGGATTCT
GCATTCTCCATTTCTTACAGCAAAGGCCTCTTTTCGATGTGTTTAGTTAGAATTTTTAAGGTCTAAT
Protein sequenceShow/hide protein sequence
MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLPGGPKKTKGRGFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDD
LQNAFGEFGEIKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQILNVDWAFSHGPIRRKNTRPARERRSRSPRRRY