; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0010300 (gene) of Snake gourd v1 genome

Gene IDTan0010300
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCentromere protein X
Genome locationLG09:73064707..73066092
RNA-Seq ExpressionTan0010300
SyntenyTan0010300
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0051382 - kinetochore assembly (biological process)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR018552 - Centromere protein X


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589406.1 Protein JINGUBANG, partial [Cucurbita argyrosperma subsp. sororia]7.1e-4494.17Show/hide
Query:  MEESAFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKRSRPMSANANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILPQLL
        MEES FDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSK+SRPMSANANALKL+SKLLQIF+SEA+QRAA IAEAEGISRIEATHLERILPQLL
Subjt:  MEESAFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKRSRPMSANANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILPQLL

Query:  LDF
        LDF
Subjt:  LDF

XP_022135388.1 protein MHF2 homolog [Momordica charantia]6.0e-4394.17Show/hide
Query:  MEESAFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKRSRPMSANANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILPQLL
        MEESAFD DLIHAIFKLEWSRRSLERE+NESSDAMDCEV+AGTSK+SRPMSANANALKLSSKLLQIFISEA+QRAA IAEAEGISRIEATHLERILPQLL
Subjt:  MEESAFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKRSRPMSANANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILPQLL

Query:  LDF
        LDF
Subjt:  LDF

XP_022921828.1 protein MHF2 homolog [Cucurbita moschata]7.1e-4494.17Show/hide
Query:  MEESAFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKRSRPMSANANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILPQLL
        MEES FDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSK+SRPMSANANALKL+SKLLQIF+SEA+QRAA IAEAEGISRIEATHLERILPQLL
Subjt:  MEESAFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKRSRPMSANANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILPQLL

Query:  LDF
        LDF
Subjt:  LDF

XP_022987126.1 protein MHF2 homolog [Cucurbita maxima]7.1e-4494.17Show/hide
Query:  MEESAFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKRSRPMSANANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILPQLL
        MEES FDPDLIHAIFKLEW+RRSLEREKNESSDAMDCEVDAGTSK+SRPMSANANALKLSSKLLQIF+SEA+QRAA IAEAEGISRIEATHLERILPQLL
Subjt:  MEESAFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKRSRPMSANANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILPQLL

Query:  LDF
        LDF
Subjt:  LDF

XP_023516676.1 protein MHF2 homolog [Cucurbita pepo subsp. pepo]3.2e-4495.15Show/hide
Query:  MEESAFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKRSRPMSANANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILPQLL
        MEES FDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSK+SRPMSANANALKLSSKLLQIF+SEA+QRAA IAEAEGISRIEATHLERILPQLL
Subjt:  MEESAFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKRSRPMSANANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILPQLL

Query:  LDF
        LDF
Subjt:  LDF

TrEMBL top hitse value%identityAlignment
A0A0A0LU58 Uncharacterized protein7.5e-3986.79Show/hide
Query:  MEESAFDPDLIHAIFKLEWSRRSLEREKNESS-DAMDCEVD--AGTSKRSRPMSANANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILP
        MEE+ F PDLIHAIFKLEWSRRSLEREKNE++ DAMDCEVD  AGTSK+SRPMSANANALKLSSKL+QIFISEA+QRAA IAEAEGISRIE THLER+LP
Subjt:  MEESAFDPDLIHAIFKLEWSRRSLEREKNESS-DAMDCEVD--AGTSKRSRPMSANANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILP

Query:  QLLLDF
        QLLLDF
Subjt:  QLLLDF

A0A1S3CLK5 centromere protein X isoform X21.5e-3986.67Show/hide
Query:  MEESAFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVD--AGTSKRSRPMSANANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILPQ
        MEE+ F PDLIHAIFKLEWSRRSLEREKNE+ DAMDCEVD  AGTSK+SRPMSANANALKLSSKL+QIFISEA+QRAA IAEAEGI RIE THLER+LPQ
Subjt:  MEESAFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVD--AGTSKRSRPMSANANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILPQ

Query:  LLLDF
        LLLDF
Subjt:  LLLDF

A0A6J1C4N9 protein MHF2 homolog2.9e-4394.17Show/hide
Query:  MEESAFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKRSRPMSANANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILPQLL
        MEESAFD DLIHAIFKLEWSRRSLERE+NESSDAMDCEV+AGTSK+SRPMSANANALKLSSKLLQIFISEA+QRAA IAEAEGISRIEATHLERILPQLL
Subjt:  MEESAFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKRSRPMSANANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILPQLL

Query:  LDF
        LDF
Subjt:  LDF

A0A6J1E4X1 protein MHF2 homolog3.5e-4494.17Show/hide
Query:  MEESAFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKRSRPMSANANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILPQLL
        MEES FDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSK+SRPMSANANALKL+SKLLQIF+SEA+QRAA IAEAEGISRIEATHLERILPQLL
Subjt:  MEESAFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKRSRPMSANANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILPQLL

Query:  LDF
        LDF
Subjt:  LDF

A0A6J1JD93 protein MHF2 homolog3.5e-4494.17Show/hide
Query:  MEESAFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKRSRPMSANANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILPQLL
        MEES FDPDLIHAIFKLEW+RRSLEREKNESSDAMDCEVDAGTSK+SRPMSANANALKLSSKLLQIF+SEA+QRAA IAEAEGISRIEATHLERILPQLL
Subjt:  MEESAFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKRSRPMSANANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILPQLL

Query:  LDF
        LDF
Subjt:  LDF

SwissProt top hitse value%identityAlignment
A8MT69 Centromere protein X7.5e-0445.1Show/hide
Query:  NANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILPQLLLDF
        + +AL+L  +LL++F+ EA  R    A+AE   R++   LE++LPQLLLDF
Subjt:  NANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILPQLLLDF

P0DJH7 Centromere protein X2.8e-0649.02Show/hide
Query:  NANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILPQLLLDF
        N +AL L ++LL++F+ EA  RAA  A+AE + +++  H+E++LPQLLLDF
Subjt:  NANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILPQLLLDF

Q2NKU0 Centromere protein X4.0e-0541.38Show/hide
Query:  RSRPMSANANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILPQLLLDF
        + +    + +AL+L ++LL+IF+ EA  R+   A+AEG++ ++   LE++LPQLLLDF
Subjt:  RSRPMSANANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILPQLLLDF

Q8C4X1 Centromere protein X7.5e-0445.1Show/hide
Query:  NANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILPQLLLDF
        + +AL+L ++ L+IF+ EA  R    A+AE +  +E   LE++LPQLLLDF
Subjt:  NANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILPQLLLDF

Q8L7N3 Protein MHF2 homolog2.3e-2968Show/hide
Query:  SAFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKRSRPMSANANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILPQLLLDF
        + FD DLIHAIFK  W+RR  ERE++++ DA + EV  GT+K++R  SANANALKLS +LL+ F+SEA+QRAAIIAEAEG+ +IEATHLERILPQLLLDF
Subjt:  SAFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKRSRPMSANANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILPQLLLDF

Arabidopsis top hitse value%identityAlignment
AT1G78790.1 unknown protein1.6e-3068Show/hide
Query:  SAFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKRSRPMSANANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILPQLLLDF
        + FD DLIHAIFK  W+RR  ERE++++ DA + EV  GT+K++R  SANANALKLS +LL+ F+SEA+QRAAIIAEAEG+ +IEATHLERILPQLLLDF
Subjt:  SAFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKRSRPMSANANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILPQLLLDF

AT1G78790.2 unknown protein6.9e-2155Show/hide
Query:  SAFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKRSRPMSANANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILPQLLLDF
        + FD DLIHAIFK  W+RR  ERE++++ DA + EV  GT+K++R                    SEA+QRAAIIAEAEG+ +IEATHLERILPQLLLDF
Subjt:  SAFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKRSRPMSANANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILPQLLLDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGAGCGCATTCGATCCTGATCTGATTCACGCCATCTTCAAGCTCGAGTGGAGCAGAAGATCACTTGAGCGCGAGAAAAACGAGAGTTCTGATGCTATGGATTG
CGAGGTTGACGCTGGAACATCCAAGAGGAGCAGGCCAATGTCAGCCAATGCAAATGCACTTAAATTGAGCTCTAAACTACTACAAATTTTTATCTCAGAGGCGATACAAC
GTGCTGCAATAATTGCTGAAGCAGAAGGTATTAGCAGAATTGAAGCCACTCATTTGGAGAGAATTCTTCCACAGTTACTACTGGATTTTTAA
mRNA sequenceShow/hide mRNA sequence
CGGGATAAGTTGAAATTTGAAAGTTGCTTCTTACAGAGTCCCACTCATAGTCGCCAGTTTCTCTCGCCATGGAAGAGAGCGCATTCGATCCTGATCTGATTCACGCCATC
TTCAAGCTCGAGTGGAGCAGAAGATCACTTGAGCGCGAGAAAAACGAGAGTTCTGATGCTATGGATTGCGAGGTTGACGCTGGAACATCCAAGAGGAGCAGGCCAATGTC
AGCCAATGCAAATGCACTTAAATTGAGCTCTAAACTACTACAAATTTTTATCTCAGAGGCGATACAACGTGCTGCAATAATTGCTGAAGCAGAAGGTATTAGCAGAATTG
AAGCCACTCATTTGGAGAGAATTCTTCCACAGTTACTACTGGATTTTTAAGGTAGCATTGTGTTTCACACATTGCAATGTTTTGCTCTTGAAGATTAAGTTCTTGATTTA
GATTGTTTAGCTACGTTAGTCATCACTCATCATTGAGTGAGTTTGTTATATGAGAGAGGTCTCATAAATAGAGTGGGTTGGGAGGGGGCGCTAGATGTTGGTACATGGTA
GTGTGCAATTGGGGAGAGTAGGG
Protein sequenceShow/hide protein sequence
MEESAFDPDLIHAIFKLEWSRRSLEREKNESSDAMDCEVDAGTSKRSRPMSANANALKLSSKLLQIFISEAIQRAAIIAEAEGISRIEATHLERILPQLLLDF