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Tan0010303 (gene) of Snake gourd v1 genome

Gene IDTan0010303
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGag/pol protein
Genome locationLG02:15661468..15661701
RNA-Seq ExpressionTan0010303
SyntenyTan0010303
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]7.5e-2268.83Show/hide
Query:  MSDILAKKHEGMITAKEIMDSVHGMFGQQSTQGRHNALKYIFNSRMSEGTSVRDHVLDMMVHFNIAESNGASIDESS
        +S++LAKKHE M+TA+EIMDS+  MFGQ S Q +H+ALKYI+N+RM+EG SVR+HVL+MMVHFN+AE NGA IDE+S
Subjt:  MSDILAKKHEGMITAKEIMDSVHGMFGQQSTQGRHNALKYIFNSRMSEGTSVRDHVLDMMVHFNIAESNGASIDESS

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]7.5e-2268.83Show/hide
Query:  MSDILAKKHEGMITAKEIMDSVHGMFGQQSTQGRHNALKYIFNSRMSEGTSVRDHVLDMMVHFNIAESNGASIDESS
        +S++LAKKHE M+TA+EIMDS+  MFGQ S Q +H+ALKYI+N+RM+EG SVR+HVL+MMVHFN+AE NGA IDE+S
Subjt:  MSDILAKKHEGMITAKEIMDSVHGMFGQQSTQGRHNALKYIFNSRMSEGTSVRDHVLDMMVHFNIAESNGASIDESS

KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]7.5e-2268.83Show/hide
Query:  MSDILAKKHEGMITAKEIMDSVHGMFGQQSTQGRHNALKYIFNSRMSEGTSVRDHVLDMMVHFNIAESNGASIDESS
        +S++LAKKHE M+TA+EIMDS+  MFGQ S Q +H+ALKYI+N+RM+EG SVR+HVL+MMVHFN+AE NGA IDE+S
Subjt:  MSDILAKKHEGMITAKEIMDSVHGMFGQQSTQGRHNALKYIFNSRMSEGTSVRDHVLDMMVHFNIAESNGASIDESS

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]7.5e-2268.83Show/hide
Query:  MSDILAKKHEGMITAKEIMDSVHGMFGQQSTQGRHNALKYIFNSRMSEGTSVRDHVLDMMVHFNIAESNGASIDESS
        +S++LAKKHE M+TA+EIMDS+  MFGQ S Q +H+ALKYI+N+RM+EG SVR+HVL+MMVHFN+AE NGA IDE+S
Subjt:  MSDILAKKHEGMITAKEIMDSVHGMFGQQSTQGRHNALKYIFNSRMSEGTSVRDHVLDMMVHFNIAESNGASIDESS

XP_022152352.1 uncharacterized protein LOC111020095 [Momordica charantia]8.9e-2373.33Show/hide
Query:  MSDILAKKHEGMITAKEIMDSVHGMFGQQSTQGRHNALKYIFNSRMSEGTSVRDHVLDMMVHFNIAESNGASIDE
        +SD+LAKKHE  ITAKEIMDS+  MFGQ S+Q RH ALK+I+NSRM EG+SVR+HVL++MVHFN+AESNGA IDE
Subjt:  MSDILAKKHEGMITAKEIMDSVHGMFGQQSTQGRHNALKYIFNSRMSEGTSVRDHVLDMMVHFNIAESNGASIDE

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein3.6e-2268.83Show/hide
Query:  MSDILAKKHEGMITAKEIMDSVHGMFGQQSTQGRHNALKYIFNSRMSEGTSVRDHVLDMMVHFNIAESNGASIDESS
        +S++LAKKHE M+TA+EIMDS+  MFGQ S Q +H+ALKYI+N+RM+EG SVR+HVL+MMVHFN+AE NGA IDE+S
Subjt:  MSDILAKKHEGMITAKEIMDSVHGMFGQQSTQGRHNALKYIFNSRMSEGTSVRDHVLDMMVHFNIAESNGASIDESS

A0A5A7TU93 Gag/pol protein3.6e-2268.83Show/hide
Query:  MSDILAKKHEGMITAKEIMDSVHGMFGQQSTQGRHNALKYIFNSRMSEGTSVRDHVLDMMVHFNIAESNGASIDESS
        +S++LAKKHE M+TA+EIMDS+  MFGQ S Q +H+ALKYI+N+RM+EG SVR+HVL+MMVHFN+AE NGA IDE+S
Subjt:  MSDILAKKHEGMITAKEIMDSVHGMFGQQSTQGRHNALKYIFNSRMSEGTSVRDHVLDMMVHFNIAESNGASIDESS

A0A5A7V4M1 Gag/pol protein3.6e-2268.83Show/hide
Query:  MSDILAKKHEGMITAKEIMDSVHGMFGQQSTQGRHNALKYIFNSRMSEGTSVRDHVLDMMVHFNIAESNGASIDESS
        +S++LAKKHE M+TA+EIMDS+  MFGQ S Q +H+ALKYI+N+RM+EG SVR+HVL+MMVHFN+AE NGA IDE+S
Subjt:  MSDILAKKHEGMITAKEIMDSVHGMFGQQSTQGRHNALKYIFNSRMSEGTSVRDHVLDMMVHFNIAESNGASIDESS

A0A5D3CPJ6 Gag/pol protein3.6e-2268.83Show/hide
Query:  MSDILAKKHEGMITAKEIMDSVHGMFGQQSTQGRHNALKYIFNSRMSEGTSVRDHVLDMMVHFNIAESNGASIDESS
        +S++LAKKHE M+TA+EIMDS+  MFGQ S Q +H+ALKYI+N+RM+EG SVR+HVL+MMVHFN+AE NGA IDE+S
Subjt:  MSDILAKKHEGMITAKEIMDSVHGMFGQQSTQGRHNALKYIFNSRMSEGTSVRDHVLDMMVHFNIAESNGASIDESS

A0A6J1DFZ2 uncharacterized protein LOC1110200954.3e-2373.33Show/hide
Query:  MSDILAKKHEGMITAKEIMDSVHGMFGQQSTQGRHNALKYIFNSRMSEGTSVRDHVLDMMVHFNIAESNGASIDE
        +SD+LAKKHE  ITAKEIMDS+  MFGQ S+Q RH ALK+I+NSRM EG+SVR+HVL++MVHFN+AESNGA IDE
Subjt:  MSDILAKKHEGMITAKEIMDSVHGMFGQQSTQGRHNALKYIFNSRMSEGTSVRDHVLDMMVHFNIAESNGASIDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGACATATTAGCCAAGAAGCATGAGGGCATGATAACCGCCAAGGAAATCATGGATTCAGTGCATGGTATGTTCGGACAACAGTCCACACAAGGCCGGCACAATGC
CCTAAAGTACATATTCAACTCAAGGATGTCAGAGGGTACATCTGTTCGGGATCATGTCCTGGATATGATGGTGCACTTTAACATCGCGGAGTCGAATGGTGCTTCTATCG
ATGAATCGAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGACATATTAGCCAAGAAGCATGAGGGCATGATAACCGCCAAGGAAATCATGGATTCAGTGCATGGTATGTTCGGACAACAGTCCACACAAGGCCGGCACAATGC
CCTAAAGTACATATTCAACTCAAGGATGTCAGAGGGTACATCTGTTCGGGATCATGTCCTGGATATGATGGTGCACTTTAACATCGCGGAGTCGAATGGTGCTTCTATCG
ATGAATCGAGCTAA
Protein sequenceShow/hide protein sequence
MSDILAKKHEGMITAKEIMDSVHGMFGQQSTQGRHNALKYIFNSRMSEGTSVRDHVLDMMVHFNIAESNGASIDESS