CuGenDBv2

Gene ID	Tan0010308
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Gag/pol protein
Genome location	LG04:18151780..18152679
RNA-Seq Expression	Tan0010308
Synteny	Tan0010308
Gene Ontology terms	GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function)
InterPro domains	IPR001584 - Integrase, catalytic core IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0025945.1 gag/pol protein [Cucumis melo var. makuwa]

1.9e-93

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Query:  MHRKSETLEKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIEHEITSQLSAP----QNGESERRNRTLLDMVQSMMSYARLPDSFWGYAVETRV
        M  KSE LEKFKEYKTEVENLL K IK L+SDRGGEYMD  FQDYMIEH I SQLSAP    QNG SERRNRTLLDMV+SMMSYA+LP SFWGYAVET V
Subjt:  MHRKSETLEKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIEHEITSQLSAP----QNGESERRNRTLLDMVQSMMSYARLPDSFWGYAVETRV

Query:  YILNNVSSKSVCETPFELWNSRK---------------------------------GYPKKTRGDLFYDPKENRVLVSTNATFLEEDHIKDHLPRSKIVL
        +ILNNV SKSV ETPFELW  RK                                 GYPK+TRG LF+DP+ENRV VSTNATFLEEDH+++H PRSK+VL
Subjt:  YILNNVSSKSVCETPFELWNSRK---------------------------------GYPKKTRGDLFYDPKENRVLVSTNATFLEEDHIKDHLPRSKIVL

Query:  NEMDSTSARVDDGASTSASVVDPSTSSQVH-SQELGMPQRSGRVVRQPEHYMGLAETQVVTPNDDYEDPLTYDQGMENVDKDEWIKAMDQEMESMYFNSV
        +E    S RV D    S+ V + +TS Q H SQ L MP+RSGRVV QP  Y+GL ETQVV P+D  EDPL+Y Q M +VDKD+W+KAMD EMESMYFNSV
Subjt:  NEMDSTSARVDDGASTSASVVDPSTSSQVH-SQELGMPQRSGRVVRQPEHYMGLAETQVVTPNDDYEDPLTYDQGMENVDKDEWIKAMDQEMESMYFNSV

KAA0035907.1 gag/pol protein [Cucumis melo var. makuwa]

4.3e-93

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Query:  MHRKSETLEKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIEHEITSQLSAP----QNGESERRNRTLLDMVQSMMSYARLPDSFWGYAVETRV
        M  KSE LEKFKEYKTEVENLL K IK  +SDRGGEYMD  FQDYMIEH I SQLSAP    QNG SERRNRTLLDMV+SMMSYA+LP SFWGYAVET V
Subjt:  MHRKSETLEKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIEHEITSQLSAP----QNGESERRNRTLLDMVQSMMSYARLPDSFWGYAVETRV

Query:  YILNNVSSKSVCETPFELWNSRK---------------------------------GYPKKTRGDLFYDPKENRVLVSTNATFLEEDHIKDHLPRSKIVL
        +ILNNV SKSV ETPFELW  RK                                 GYPK+TRG LF+DPKENRV VSTNATFLEEDH+++H PRSK+VL
Subjt:  YILNNVSSKSVCETPFELWNSRK---------------------------------GYPKKTRGDLFYDPKENRVLVSTNATFLEEDHIKDHLPRSKIVL

Query:  NEMDSTSARVDDGASTSASVVDPSTSSQVH-SQELGMPQRSGRVVRQPEHYMGLAETQVVTPNDDYEDPLTYDQGMENVDKDEWIKAMDQEMESMYFNSV
        +E    S RV D    S+ V + +TS Q H SQ L MP+RSGRVV QP  Y+GL ETQVV P+D  EDPL+Y Q M +VDKD+W+KAMD EMESMYFNSV
Subjt:  NEMDSTSARVDDGASTSASVVDPSTSSQVH-SQELGMPQRSGRVVRQPEHYMGLAETQVVTPNDDYEDPLTYDQGMENVDKDEWIKAMDQEMESMYFNSV

KAA0059226.1 gag/pol protein [Cucumis melo var. makuwa]

1.9e-93

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Query:  MHRKSETLEKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIEHEITSQLSAP----QNGESERRNRTLLDMVQSMMSYARLPDSFWGYAVETRV
        M  KSE LEKFKEYKTEVENLL K IK L+SDRGGEYMD  FQDYMIEH I SQLSAP    QNG SERRNRTLLDMV+SMMSYA+LP SFWGYAVET V
Subjt:  MHRKSETLEKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIEHEITSQLSAP----QNGESERRNRTLLDMVQSMMSYARLPDSFWGYAVETRV

Query:  YILNNVSSKSVCETPFELWNSRK---------------------------------GYPKKTRGDLFYDPKENRVLVSTNATFLEEDHIKDHLPRSKIVL
        +ILNNV SKSV ETPFELW  RK                                 GYPK+TRG LF+DP+ENRV VSTNATFLEEDH+++H PRSK+VL
Subjt:  YILNNVSSKSVCETPFELWNSRK---------------------------------GYPKKTRGDLFYDPKENRVLVSTNATFLEEDHIKDHLPRSKIVL

Query:  NEMDSTSARVDDGASTSASVVDPSTSSQVH-SQELGMPQRSGRVVRQPEHYMGLAETQVVTPNDDYEDPLTYDQGMENVDKDEWIKAMDQEMESMYFNSV
        +E    S RV D    S+ V + +TS Q H SQ L MP+RSGRVV QP  Y+GL ETQVV P+D  EDPL+Y Q M +VDKD+W+KAMD EMESMYFNSV
Subjt:  NEMDSTSARVDDGASTSASVVDPSTSSQVH-SQELGMPQRSGRVVRQPEHYMGLAETQVVTPNDDYEDPLTYDQGMENVDKDEWIKAMDQEMESMYFNSV

TYK02840.1 gag/pol protein [Cucumis melo var. makuwa]

1.9e-93

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Query:  MHRKSETLEKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIEHEITSQLSAP----QNGESERRNRTLLDMVQSMMSYARLPDSFWGYAVETRV
        M  KSE LEKFKEYKTEVENLL K IK L+SDRGGEYMD  FQDYMIEH I SQLSAP    QNG SERRNRTLLDMV+SMMSYA+LP SFWGYAVET V
Subjt:  MHRKSETLEKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIEHEITSQLSAP----QNGESERRNRTLLDMVQSMMSYARLPDSFWGYAVETRV

Query:  YILNNVSSKSVCETPFELWNSRK---------------------------------GYPKKTRGDLFYDPKENRVLVSTNATFLEEDHIKDHLPRSKIVL
        +ILNNV SKSV ETPFELW  RK                                 GYPK+TRG LF+DP+ENRV VSTNATFLEEDH+++H PRSK+VL
Subjt:  YILNNVSSKSVCETPFELWNSRK---------------------------------GYPKKTRGDLFYDPKENRVLVSTNATFLEEDHIKDHLPRSKIVL

Query:  NEMDSTSARVDDGASTSASVVDPSTSSQVH-SQELGMPQRSGRVVRQPEHYMGLAETQVVTPNDDYEDPLTYDQGMENVDKDEWIKAMDQEMESMYFNSV
        +E    S RV D    S+ V + +TS Q H SQ L MP+RSGRVV QP  Y+GL ETQVV P+D  EDPL+Y Q M +VDKD+W+KAMD EMESMYFNSV
Subjt:  NEMDSTSARVDDGASTSASVVDPSTSSQVH-SQELGMPQRSGRVVRQPEHYMGLAETQVVTPNDDYEDPLTYDQGMENVDKDEWIKAMDQEMESMYFNSV

TYK15984.1 gag/pol protein [Cucumis melo var. makuwa]

1.4e-91

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Query:  MHRKSETLEKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIEHEITSQLSAP----QNGESERRNRTLLDMVQSMMSYARLPDSFWGYAVETRV
        M  KSE LEKFKEYK EVENLL K IK L+SDRGGEYMD  FQDYMIEH I SQLSAP    QNG SERRNRTLLDMV SMMSYA+LP SFWGYAVET V
Subjt:  MHRKSETLEKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIEHEITSQLSAP----QNGESERRNRTLLDMVQSMMSYARLPDSFWGYAVETRV

Query:  YILNNVSSKSVCETPFELWNSRK---------------------------------GYPKKTRGDLFYDPKENRVLVSTNATFLEEDHIKDHLPRSKIVL
        +ILNNV SKSV + PFELW  RK                                 GYPK+TRG LF+DP+ENRV VSTNATFLEEDH+++H PRSK+VL
Subjt:  YILNNVSSKSVCETPFELWNSRK---------------------------------GYPKKTRGDLFYDPKENRVLVSTNATFLEEDHIKDHLPRSKIVL

Query:  NEMDSTSARVDDGASTSASVVDPSTSSQVH-SQELGMPQRSGRVVRQPEHYMGLAETQVVTPNDDYEDPLTYDQGMENVDKDEWIKAMDQEMESMYFNSV
        +E    S RV D    S+ V + +TS Q H SQ L MP+RSGRVV QP  Y+GL ETQVV P+D  EDPL+Y Q M +VDKD+W+KAMD EMESMYFNSV
Subjt:  NEMDSTSARVDDGASTSASVVDPSTSSQVH-SQELGMPQRSGRVVRQPEHYMGLAETQVVTPNDDYEDPLTYDQGMENVDKDEWIKAMDQEMESMYFNSV

TrEMBL top hits

e value

%identity

Alignment

A0A5A7T2V9 Gag/pol protein

2.1e-93

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Query:  MHRKSETLEKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIEHEITSQLSAP----QNGESERRNRTLLDMVQSMMSYARLPDSFWGYAVETRV
        M  KSE LEKFKEYKTEVENLL K IK  +SDRGGEYMD  FQDYMIEH I SQLSAP    QNG SERRNRTLLDMV+SMMSYA+LP SFWGYAVET V
Subjt:  MHRKSETLEKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIEHEITSQLSAP----QNGESERRNRTLLDMVQSMMSYARLPDSFWGYAVETRV

Query:  YILNNVSSKSVCETPFELWNSRK---------------------------------GYPKKTRGDLFYDPKENRVLVSTNATFLEEDHIKDHLPRSKIVL
        +ILNNV SKSV ETPFELW  RK                                 GYPK+TRG LF+DPKENRV VSTNATFLEEDH+++H PRSK+VL
Subjt:  YILNNVSSKSVCETPFELWNSRK---------------------------------GYPKKTRGDLFYDPKENRVLVSTNATFLEEDHIKDHLPRSKIVL

Query:  NEMDSTSARVDDGASTSASVVDPSTSSQVH-SQELGMPQRSGRVVRQPEHYMGLAETQVVTPNDDYEDPLTYDQGMENVDKDEWIKAMDQEMESMYFNSV
        +E    S RV D    S+ V + +TS Q H SQ L MP+RSGRVV QP  Y+GL ETQVV P+D  EDPL+Y Q M +VDKD+W+KAMD EMESMYFNSV
Subjt:  NEMDSTSARVDDGASTSASVVDPSTSSQVH-SQELGMPQRSGRVVRQPEHYMGLAETQVVTPNDDYEDPLTYDQGMENVDKDEWIKAMDQEMESMYFNSV

A0A5A7TZD0 Gag/pol protein

9.3e-94

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Query:  MHRKSETLEKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIEHEITSQLSAP----QNGESERRNRTLLDMVQSMMSYARLPDSFWGYAVETRV
        M  KSE LEKFKEYKTEVENLL K IK L+SDRGGEYMD  FQDYMIEH I SQLSAP    QNG SERRNRTLLDMV+SMMSYA+LP SFWGYAVET V
Subjt:  MHRKSETLEKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIEHEITSQLSAP----QNGESERRNRTLLDMVQSMMSYARLPDSFWGYAVETRV

Query:  YILNNVSSKSVCETPFELWNSRK---------------------------------GYPKKTRGDLFYDPKENRVLVSTNATFLEEDHIKDHLPRSKIVL
        +ILNNV SKSV ETPFELW  RK                                 GYPK+TRG LF+DP+ENRV VSTNATFLEEDH+++H PRSK+VL
Subjt:  YILNNVSSKSVCETPFELWNSRK---------------------------------GYPKKTRGDLFYDPKENRVLVSTNATFLEEDHIKDHLPRSKIVL

Query:  NEMDSTSARVDDGASTSASVVDPSTSSQVH-SQELGMPQRSGRVVRQPEHYMGLAETQVVTPNDDYEDPLTYDQGMENVDKDEWIKAMDQEMESMYFNSV
        +E    S RV D    S+ V + +TS Q H SQ L MP+RSGRVV QP  Y+GL ETQVV P+D  EDPL+Y Q M +VDKD+W+KAMD EMESMYFNSV
Subjt:  NEMDSTSARVDDGASTSASVVDPSTSSQVH-SQELGMPQRSGRVVRQPEHYMGLAETQVVTPNDDYEDPLTYDQGMENVDKDEWIKAMDQEMESMYFNSV

A0A5A7UYE8 Gag/pol protein

9.3e-94

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Query:  MHRKSETLEKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIEHEITSQLSAP----QNGESERRNRTLLDMVQSMMSYARLPDSFWGYAVETRV
        M  KSE LEKFKEYKTEVENLL K IK L+SDRGGEYMD  FQDYMIEH I SQLSAP    QNG SERRNRTLLDMV+SMMSYA+LP SFWGYAVET V
Subjt:  MHRKSETLEKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIEHEITSQLSAP----QNGESERRNRTLLDMVQSMMSYARLPDSFWGYAVETRV

Query:  YILNNVSSKSVCETPFELWNSRK---------------------------------GYPKKTRGDLFYDPKENRVLVSTNATFLEEDHIKDHLPRSKIVL
        +ILNNV SKSV ETPFELW  RK                                 GYPK+TRG LF+DP+ENRV VSTNATFLEEDH+++H PRSK+VL
Subjt:  YILNNVSSKSVCETPFELWNSRK---------------------------------GYPKKTRGDLFYDPKENRVLVSTNATFLEEDHIKDHLPRSKIVL

Query:  NEMDSTSARVDDGASTSASVVDPSTSSQVH-SQELGMPQRSGRVVRQPEHYMGLAETQVVTPNDDYEDPLTYDQGMENVDKDEWIKAMDQEMESMYFNSV
        +E    S RV D    S+ V + +TS Q H SQ L MP+RSGRVV QP  Y+GL ETQVV P+D  EDPL+Y Q M +VDKD+W+KAMD EMESMYFNSV
Subjt:  NEMDSTSARVDDGASTSASVVDPSTSSQVH-SQELGMPQRSGRVVRQPEHYMGLAETQVVTPNDDYEDPLTYDQGMENVDKDEWIKAMDQEMESMYFNSV

A0A5D3BUN8 Gag/pol protein

9.3e-94

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Query:  MHRKSETLEKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIEHEITSQLSAP----QNGESERRNRTLLDMVQSMMSYARLPDSFWGYAVETRV
        M  KSE LEKFKEYKTEVENLL K IK L+SDRGGEYMD  FQDYMIEH I SQLSAP    QNG SERRNRTLLDMV+SMMSYA+LP SFWGYAVET V
Subjt:  MHRKSETLEKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIEHEITSQLSAP----QNGESERRNRTLLDMVQSMMSYARLPDSFWGYAVETRV

Query:  YILNNVSSKSVCETPFELWNSRK---------------------------------GYPKKTRGDLFYDPKENRVLVSTNATFLEEDHIKDHLPRSKIVL
        +ILNNV SKSV ETPFELW  RK                                 GYPK+TRG LF+DP+ENRV VSTNATFLEEDH+++H PRSK+VL
Subjt:  YILNNVSSKSVCETPFELWNSRK---------------------------------GYPKKTRGDLFYDPKENRVLVSTNATFLEEDHIKDHLPRSKIVL

Query:  NEMDSTSARVDDGASTSASVVDPSTSSQVH-SQELGMPQRSGRVVRQPEHYMGLAETQVVTPNDDYEDPLTYDQGMENVDKDEWIKAMDQEMESMYFNSV
        +E    S RV D    S+ V + +TS Q H SQ L MP+RSGRVV QP  Y+GL ETQVV P+D  EDPL+Y Q M +VDKD+W+KAMD EMESMYFNSV
Subjt:  NEMDSTSARVDDGASTSASVVDPSTSSQVH-SQELGMPQRSGRVVRQPEHYMGLAETQVVTPNDDYEDPLTYDQGMENVDKDEWIKAMDQEMESMYFNSV

A0A5D3CYF4 Gag/pol protein

6.6e-92

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Query:  MHRKSETLEKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIEHEITSQLSAP----QNGESERRNRTLLDMVQSMMSYARLPDSFWGYAVETRV
        M  KSE LEKFKEYK EVENLL K IK L+SDRGGEYMD  FQDYMIEH I SQLSAP    QNG SERRNRTLLDMV SMMSYA+LP SFWGYAVET V
Subjt:  MHRKSETLEKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIEHEITSQLSAP----QNGESERRNRTLLDMVQSMMSYARLPDSFWGYAVETRV

Query:  YILNNVSSKSVCETPFELWNSRK---------------------------------GYPKKTRGDLFYDPKENRVLVSTNATFLEEDHIKDHLPRSKIVL
        +ILNNV SKSV + PFELW  RK                                 GYPK+TRG LF+DP+ENRV VSTNATFLEEDH+++H PRSK+VL
Subjt:  YILNNVSSKSVCETPFELWNSRK---------------------------------GYPKKTRGDLFYDPKENRVLVSTNATFLEEDHIKDHLPRSKIVL

Query:  NEMDSTSARVDDGASTSASVVDPSTSSQVH-SQELGMPQRSGRVVRQPEHYMGLAETQVVTPNDDYEDPLTYDQGMENVDKDEWIKAMDQEMESMYFNSV
        +E    S RV D    S+ V + +TS Q H SQ L MP+RSGRVV QP  Y+GL ETQVV P+D  EDPL+Y Q M +VDKD+W+KAMD EMESMYFNSV
Subjt:  NEMDSTSARVDDGASTSASVVDPSTSSQVH-SQELGMPQRSGRVVRQPEHYMGLAETQVVTPNDDYEDPLTYDQGMENVDKDEWIKAMDQEMESMYFNSV

SwissProt top hits

e value

%identity

Alignment

P04146 Copia protein

7.0e-14

32.31

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Query:  KSETLEKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIEHEITSQLSAPQ----NGESERRNRTLLDMVQSMMSYARLPDSFWGYAVETRVYIL
        KS+    F+++  + E      +  L  D G EY+  E + + ++  I+  L+ P     NG SER  RT+ +  ++M+S A+L  SFWG AV T  Y++
Subjt:  KSETLEKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIEHEITSQLSAPQ----NGESERRNRTLLDMVQSMMSYARLPDSFWGYAVETRVYIL

Query:  NNVSSKSVCE---TPFELWNSRKGYPKKTR
        N + S+++ +   TP+E+W+++K Y K  R
Subjt:  NNVSSKSVCE---TPFELWNSRKGYPKKTR

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94

6.1e-18

25.31

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Query:  KSETLEKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIEHEITSQLSAP----QNGESERRNRTLLDMVQSMMSYARLPDSFWGYAVETRVYIL
        K +  + F+++   VE   G+ +K L+SD GGEY   EF++Y   H I  + + P     NG +ER NRT+++ V+SM+  A+LP SFWG AV+T  Y++
Subjt:  KSETLEKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIEHEITSQLSAP----QNGESERRNRTLLDMVQSMMSYARLPDSFWGYAVETRVYIL

Query:  NNVSSKSVC-ETPFELWNSRK-----------------------------------GYPKKTRGDLFYDPKENRVLVSTNATFLEEDHIKDHLPRSKIVL
        N   S  +  E P  +W +++                                   GY  +  G   +DP + +V+ S +  F  E  ++     S+ V 
Subjt:  NNVSSKSVC-ETPFELWNSRK-----------------------------------GYPKKTRGDLFYDPKENRVLVSTNATFLEEDHIKDHLPRSKIVL

Query:  N-----------------EMDSTSARVDDGASTSASVVDPSTSSQVHSQELGMP----------QRSGRVVRQPEHYMGLAETQVVTPNDDYEDPLTYDQ
        N                   +ST+  V +       V++         +E+  P          +RS R   +   Y     T+ V  +DD E P +  +
Subjt:  N-----------------EMDSTSARVDDGASTSASVVDPSTSSQVHSQELGMP----------QRSGRVVRQPEHYMGLAETQVVTPNDDYEDPLTYDQ

Query:  GMENVDKDEWIKAMDQEMESMYFN
         + + +K++ +KAM +EMES+  N
Subjt:  GMENVDKDEWIKAMDQEMESMYFN

P47024 Transposon Ty4-J Gag-Pol polyprotein

3.1e-06

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Query:  VENLLGKTIKTLQSDRGGEYMDTEFQDYM----IEHEITSQLSAPQNGESERRNRTLLDMVQSMMSYARLPDSFWGYAVETRVYILNNVSSKSVCETPFE
        VE    + ++ + SDRG E+ + + ++Y     I H +TS      NG +ER  RT++    +++  + L   FW YAV +   I N +  KS  + P +
Subjt:  VENLLGKTIKTLQSDRGGEYMDTEFQDYM----IEHEITSQLSAPQNGESERRNRTLLDMVQSMMSYARLPDSFWGYAVETRVYILNNVSSKSVCETPFE

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1

8.0e-10

31.01

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Query:  MHRKSETLEKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIEHEITSQLSAP----QNGESERRNRTLLDMVQSMMSYARLPDSFWGYAVETRV
        + +KS+  E F  +K  +EN     I T  SD GGE++     +Y  +H I+   S P     NG SER++R +++   +++S+A +P ++W YA    V
Subjt:  MHRKSETLEKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIEHEITSQLSAP----QNGESERRNRTLLDMVQSMMSYARLPDSFWGYAVETRV

Query:  YILNNVSSKSV-CETPFE-LWNSRKGYPK
        Y++N + +  +  E+PF+ L+ +   Y K
Subjt:  YILNNVSSKSV-CETPFE-LWNSRKGYPK

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2

4.2e-11

32.56

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Query:  MHRKSETLEKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIEHEITSQLSAP----QNGESERRNRTLLDMVQSMMSYARLPDSFWGYAVETRV
        + +KS+  + F  +K+ VEN     I TL SD GGE++    +DY+ +H I+   S P     NG SER++R +++M  +++S+A +P ++W YA    V
Subjt:  MHRKSETLEKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIEHEITSQLSAP----QNGESERRNRTLLDMVQSMMSYARLPDSFWGYAVETRV

Query:  YILNNVSSKSV-CETPFE-LWNSRKGYPK
        Y++N + +  +  ++PF+ L+     Y K
Subjt:  YILNNVSSKSV-CETPFE-LWNSRKGYPK

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCATAGGAAGTCTGAAACTCTTGAAAAGTTCAAGGAGTACAAGACTGAGGTTGAGAACCTGTTAGGTAAAACCATAAAAACACTTCAATCGGATCGAGGTGGAGAGTA
TATGGACACTGAATTCCAAGACTATATGATAGAACACGAAATTACGTCCCAACTCTCAGCACCGCAGAATGGTGAATCGGAGAGGAGAAACCGAACCCTGTTGGACATGG
TTCAGTCGATGATGAGCTATGCTCGTCTCCCTGATTCTTTTTGGGGTTACGCAGTGGAGACTAGAGTGTATATTTTGAACAATGTTTCGTCGAAGAGTGTTTGCGAAACA
CCTTTCGAACTCTGGAATAGTCGTAAAGGTTACCCAAAAAAGACTAGGGGTGATCTATTTTACGATCCTAAGGAAAATAGGGTGCTTGTGTCGACAAACGCCACTTTCCT
TGAGGAAGACCACATCAAGGATCATTTGCCTAGGAGCAAAATCGTGTTAAACGAAATGGACAGTACATCAGCAAGAGTTGATGATGGGGCTAGTACGTCAGCAAGTGTTG
TTGATCCTAGCACGTCAAGTCAAGTCCATTCCCAAGAGTTGGGAATGCCTCAACGTAGTGGGAGGGTTGTGAGACAGCCTGAACATTACATGGGTTTAGCTGAAACCCAA
GTCGTCACCCCAAATGATGACTACGAGGATCCATTGACCTATGATCAGGGAATGGAAAACGTTGACAAGGACGAATGGATTAAAGCTATGGACCAGGAAATGGAGTCGAT
GTACTTCAATTCTGTCTAG

mRNA sequence

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Protein sequence

Show/hide protein sequence

MHRKSETLEKFKEYKTEVENLLGKTIKTLQSDRGGEYMDTEFQDYMIEHEITSQLSAPQNGESERRNRTLLDMVQSMMSYARLPDSFWGYAVETRVYILNNVSSKSVCET
PFELWNSRKGYPKKTRGDLFYDPKENRVLVSTNATFLEEDHIKDHLPRSKIVLNEMDSTSARVDDGASTSASVVDPSTSSQVHSQELGMPQRSGRVVRQPEHYMGLAETQ
VVTPNDDYEDPLTYDQGMENVDKDEWIKAMDQEMESMYFNSV

Tan0010308 (gene) of Snake gourd v1 genome