; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0010315 (gene) of Snake gourd v1 genome

Gene IDTan0010315
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionF-box domain-containing protein
Genome locationLG10:4856492..4860526
RNA-Seq ExpressionTan0010315
SyntenyTan0010315
Gene Ontology termsGO:0009740 - gibberellic acid mediated signaling pathway (biological process)
GO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597321.1 hypothetical protein SDJN03_10501, partial [Cucurbita argyrosperma subsp. sororia]2.3e-12385.43Show/hide
Query:  FEFMARNDFLGGGARWKARKKKRANVSDENGSQN----VLLQDPLQVLGPDLLMAILSYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWFGKAHIP
        FEFMA +  LGGG RWK RKK R NVSDE G QN    VLLQDP +VLG DLLMAIL YVD+RSVALSLLVSRSWY +ASSD LWSSKCVELW GKAHIP
Subjt:  FEFMARNDFLGGGARWKARKKKRANVSDENGSQN----VLLQDPLQVLGPDLLMAILSYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWFGKAHIP

Query:  RLVHIRGLPKLAAYSLSIMDGKRTRIMREDLCDHAWQFHFNKEAPIYWRDLDPYWQGSLPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTFVGDGKI
        RL   RGLPK+AAYSLS+MDG RTRIMREDLCDHAWQFHFNKEAP+YWRDLDPYWQGS  LMRRYFHPDGSQTADPDDRVWGGHECCFSTVTT VGDGKI
Subjt:  RLVHIRGLPKLAAYSLSIMDGKRTRIMREDLCDHAWQFHFNKEAPIYWRDLDPYWQGSLPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTFVGDGKI

Query:  REHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKDGGTGPL
        REHYVRIN+WPRM VSRNEDWSW+MSNHFTSYSSIADAEKDGGTGPL
Subjt:  REHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKDGGTGPL

KAG7028788.1 hypothetical protein SDJN02_09969 [Cucurbita argyrosperma subsp. argyrosperma]2.2e-12185.25Show/hide
Query:  MARNDFLGGGARWKARKKKRANVSDENGSQN----VLLQDPLQVLGPDLLMAILSYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWFGKAHIPRLV
        MA +  LGGG RWK RKK R NVSDE G QN    VLLQDP +VLG DLLMAIL YVD+RSVALSLLVSRSWY +ASSD LWSSKCVELW GKAHIPRL 
Subjt:  MARNDFLGGGARWKARKKKRANVSDENGSQN----VLLQDPLQVLGPDLLMAILSYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWFGKAHIPRLV

Query:  HIRGLPKLAAYSLSIMDGKRTRIMREDLCDHAWQFHFNKEAPIYWRDLDPYWQGSLPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTFVGDGKIREH
          RGLPK+AAYSLS+MDG RTRIMREDLCDHAWQFHFNKEAP+YWRDLDPYWQGS  LMRRYFHPDGSQTADPDDRVWGGHECCFSTVTT VGDGKIREH
Subjt:  HIRGLPKLAAYSLSIMDGKRTRIMREDLCDHAWQFHFNKEAPIYWRDLDPYWQGSLPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTFVGDGKIREH

Query:  YVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKDGGTGPL
        YVRIN+WPRM VSRNEDWSW+MSNHFTSYSSIADAEKDGGTGPL
Subjt:  YVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKDGGTGPL

XP_004134023.1 uncharacterized protein LOC101220252 isoform X2 [Cucumis sativus]1.4e-12085.02Show/hide
Query:  MARNDFLGGGARWKAR--KKKRANVSDENGSQ-----NVLLQDPLQVLGPDLLMAILSYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWFGKAHIP
        MA++DFLGGGARWK+R  KKKR  VSDE G Q     N LLQDP +VLG DLL+AILSY+DARSVALSL VSRSWYAVASSD LWSSKC+ELW GKAHIP
Subjt:  MARNDFLGGGARWKAR--KKKRANVSDENGSQ-----NVLLQDPLQVLGPDLLMAILSYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWFGKAHIP

Query:  RLVHIRGLPKLAAYSLSIMDGKRTRIMREDLCDHAWQFHFNKEAPIYWRDLDPYWQGSLPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTFVGDGKI
        RL   RGLPKLAAYSLS+MDGKRTRIMREDLCDHAWQFHFNKEAP+YWRDLDPYWQGS PLMRRYFHPDG+QTADPDDRVWGGHE CFSTVT+FVGDG+I
Subjt:  RLVHIRGLPKLAAYSLSIMDGKRTRIMREDLCDHAWQFHFNKEAPIYWRDLDPYWQGSLPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTFVGDGKI

Query:  REHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKDGGTGPL
        REHYVRINRWPRMFVSRNEDWSW+MSNHFTSYSSIAD EK GGTGPL
Subjt:  REHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKDGGTGPL

XP_022157958.1 uncharacterized protein LOC111024557 isoform X1 [Momordica charantia]1.0e-12685.11Show/hide
Query:  PKPFFINPSALSSFEFMARNDFLGGGARWKARKKKR-ANVSD----ENGSQNVLLQDPLQVLGPDLLMAILSYVDARSVALSLLVSRSWYAVASSDCLWS
        PK F  NPS  SSFEFM + D LGGGA WK RKKK+  NVSD    ENGS+NVLLQDPLQVLGPDLLMAIL YVDARSVALSLLVSRSWYAVASSD LWS
Subjt:  PKPFFINPSALSSFEFMARNDFLGGGARWKARKKKR-ANVSD----ENGSQNVLLQDPLQVLGPDLLMAILSYVDARSVALSLLVSRSWYAVASSDCLWS

Query:  SKCVELWFGKAHIPRLVHIRGLPKLAAYSLSIMDGKRTRIMREDLCDHAWQFHFNKEAPIYWRDLDPYWQGSLPLMRRYFHPDGSQTADPDDRVWGGHEC
        SKCVELW GKAHIPRL +I+GLP LAAYSLS+MDGKRTRIMREDLCDHAWQFHFNKEAP+YWRDLDPYWQGS PLMRRYFHPDGSQTADPDDRVWGGHEC
Subjt:  SKCVELWFGKAHIPRLVHIRGLPKLAAYSLSIMDGKRTRIMREDLCDHAWQFHFNKEAPIYWRDLDPYWQGSLPLMRRYFHPDGSQTADPDDRVWGGHEC

Query:  CFSTVTTFVG-DGKIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKDGGTGPL
        CFS VT+F G DGKIREHYVRINRWPRM VSRNEDWSWK+SN   SYSSIADA+KDGGTGPL
Subjt:  CFSTVTTFVG-DGKIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKDGGTGPL

XP_038875840.1 uncharacterized protein LOC120068200 [Benincasa hispida]4.0e-12386.48Show/hide
Query:  MARNDFLGGGARWKARKKKRANVSD----ENGSQNVLLQDPLQVLGPDLLMAILSYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWFGKAHIPRLV
        MA++D LGGGARWK RKKKR NVSD    +NG++NVLLQDP +VLG DL MAILSY+DARSVALSLLVSRSWYA+ASSD LWSSKC ELW GKAHIPRL 
Subjt:  MARNDFLGGGARWKARKKKRANVSD----ENGSQNVLLQDPLQVLGPDLLMAILSYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWFGKAHIPRLV

Query:  HIRGLPKLAAYSLSIMDGKRTRIMREDLCDHAWQFHFNKEAPIYWRDLDPYWQGSLPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTFVGDGKIREH
          RGLPKLAAYSLS+MDGKRTRIMREDLCDHAWQFHFNKEAP+YWRDLDPYWQGS PLMRRYFHPDGSQTADPDDRVWGGHE CF TVT+FVGDG+IREH
Subjt:  HIRGLPKLAAYSLSIMDGKRTRIMREDLCDHAWQFHFNKEAPIYWRDLDPYWQGSLPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTFVGDGKIREH

Query:  YVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKDGGTGPL
        YVRIN+WPRMFVSRNEDWSWKMSNHFTSYSSIADAEK GGTGPL
Subjt:  YVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKDGGTGPL

TrEMBL top hitse value%identityAlignment
A0A0A0L471 F-box domain-containing protein6.9e-12185.02Show/hide
Query:  MARNDFLGGGARWKAR--KKKRANVSDENGSQ-----NVLLQDPLQVLGPDLLMAILSYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWFGKAHIP
        MA++DFLGGGARWK+R  KKKR  VSDE G Q     N LLQDP +VLG DLL+AILSY+DARSVALSL VSRSWYAVASSD LWSSKC+ELW GKAHIP
Subjt:  MARNDFLGGGARWKAR--KKKRANVSDENGSQ-----NVLLQDPLQVLGPDLLMAILSYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWFGKAHIP

Query:  RLVHIRGLPKLAAYSLSIMDGKRTRIMREDLCDHAWQFHFNKEAPIYWRDLDPYWQGSLPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTFVGDGKI
        RL   RGLPKLAAYSLS+MDGKRTRIMREDLCDHAWQFHFNKEAP+YWRDLDPYWQGS PLMRRYFHPDG+QTADPDDRVWGGHE CFSTVT+FVGDG+I
Subjt:  RLVHIRGLPKLAAYSLSIMDGKRTRIMREDLCDHAWQFHFNKEAPIYWRDLDPYWQGSLPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTFVGDGKI

Query:  REHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKDGGTGPL
        REHYVRINRWPRMFVSRNEDWSW+MSNHFTSYSSIAD EK GGTGPL
Subjt:  REHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKDGGTGPL

A0A1S3AWZ4 uncharacterized protein LOC103483521 isoform X11.7e-11982.68Show/hide
Query:  MARNDFLGGGARWKAR---------KKKRANVSDENGSQ-----NVLLQDPLQVLGPDLLMAILSYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELW
        MA++DFL GGARWK R         KKKR  VSDE G Q     N +LQDP +VLG DLLM ILSY+DARSVALSLLVSRSWYAVASSD LWSSKC+ELW
Subjt:  MARNDFLGGGARWKAR---------KKKRANVSDENGSQ-----NVLLQDPLQVLGPDLLMAILSYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELW

Query:  FGKAHIPRLVHIRGLPKLAAYSLSIMDGKRTRIMREDLCDHAWQFHFNKEAPIYWRDLDPYWQGSLPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTT
         GKAHIPRL   RGLPKLAAYSLSIMDGKRTRIMREDLCDHAWQFHFNKEAP+YWRDLDPYWQGS PLMRRYFHPDGSQTADPDDRVWGGHE CFSTVT+
Subjt:  FGKAHIPRLVHIRGLPKLAAYSLSIMDGKRTRIMREDLCDHAWQFHFNKEAPIYWRDLDPYWQGSLPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTT

Query:  FVGDGKIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKDGGTGPL
        FVGDG+IREHYVRINRWPRMFVSRNEDWSW+MSNHFTSYSSIAD +K GGTGPL
Subjt:  FVGDGKIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKDGGTGPL

A0A5A7U1A5 F-box family protein6.4e-11982.61Show/hide
Query:  MARNDFLGGGARWKAR--------KKKRANVSDENGSQ-----NVLLQDPLQVLGPDLLMAILSYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWF
        MA++DFL  GARWK R        KKKR  VSDE G Q     N +LQDP +VLG DLLM ILSY+DARSVALSLLVSRSWYAVASSD LWSSKC+ELWF
Subjt:  MARNDFLGGGARWKAR--------KKKRANVSDENGSQ-----NVLLQDPLQVLGPDLLMAILSYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWF

Query:  GKAHIPRLVHIRGLPKLAAYSLSIMDGKRTRIMREDLCDHAWQFHFNKEAPIYWRDLDPYWQGSLPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTF
        GKAHIPRL   RGLPKLAAYSLSIMDGKRTRIMREDLCDHAWQFHFNKEAP+YWRDLDPYWQGS PLMRRYFHPDGSQTADPDDRVWGGHE CFSTVT+F
Subjt:  GKAHIPRLVHIRGLPKLAAYSLSIMDGKRTRIMREDLCDHAWQFHFNKEAPIYWRDLDPYWQGSLPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTF

Query:  VGDGKIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKDGGTGPL
        VGDG+IREHYVRINRWPRMFVSRNEDWSW+MSNHFTSY SIAD +K GGTGPL
Subjt:  VGDGKIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKDGGTGPL

A0A5D3D180 F-box family protein4.9e-11982.94Show/hide
Query:  MARNDFLGGGARWKAR-------KKKRANVSDENGSQ-----NVLLQDPLQVLGPDLLMAILSYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWFG
        MA++DFL  GARWK R       KKKR  VSDE G Q     N +LQDP +VLG DLLM ILSY+DARSVALSLLVSRSWYAVASSD LWSSKC+ELWFG
Subjt:  MARNDFLGGGARWKAR-------KKKRANVSDENGSQ-----NVLLQDPLQVLGPDLLMAILSYVDARSVALSLLVSRSWYAVASSDCLWSSKCVELWFG

Query:  KAHIPRLVHIRGLPKLAAYSLSIMDGKRTRIMREDLCDHAWQFHFNKEAPIYWRDLDPYWQGSLPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTFV
        KAHIPRL   RGLPKLAAYSLSIMDGKRTRIMREDLCDHAWQFHFNKEAP+YWRDLDPYWQGS PLMRRYFHPDGSQTADPDDRVWGGHE CFSTVT+FV
Subjt:  KAHIPRLVHIRGLPKLAAYSLSIMDGKRTRIMREDLCDHAWQFHFNKEAPIYWRDLDPYWQGSLPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTFV

Query:  GDGKIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKDGGTGPL
        GDG+IREHYVRINRWPRMFVSRNEDWSW+MSNHFTSY SIAD +K GGTGPL
Subjt:  GDGKIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKDGGTGPL

A0A6J1DUS5 uncharacterized protein LOC111024557 isoform X14.9e-12785.11Show/hide
Query:  PKPFFINPSALSSFEFMARNDFLGGGARWKARKKKR-ANVSD----ENGSQNVLLQDPLQVLGPDLLMAILSYVDARSVALSLLVSRSWYAVASSDCLWS
        PK F  NPS  SSFEFM + D LGGGA WK RKKK+  NVSD    ENGS+NVLLQDPLQVLGPDLLMAIL YVDARSVALSLLVSRSWYAVASSD LWS
Subjt:  PKPFFINPSALSSFEFMARNDFLGGGARWKARKKKR-ANVSD----ENGSQNVLLQDPLQVLGPDLLMAILSYVDARSVALSLLVSRSWYAVASSDCLWS

Query:  SKCVELWFGKAHIPRLVHIRGLPKLAAYSLSIMDGKRTRIMREDLCDHAWQFHFNKEAPIYWRDLDPYWQGSLPLMRRYFHPDGSQTADPDDRVWGGHEC
        SKCVELW GKAHIPRL +I+GLP LAAYSLS+MDGKRTRIMREDLCDHAWQFHFNKEAP+YWRDLDPYWQGS PLMRRYFHPDGSQTADPDDRVWGGHEC
Subjt:  SKCVELWFGKAHIPRLVHIRGLPKLAAYSLSIMDGKRTRIMREDLCDHAWQFHFNKEAPIYWRDLDPYWQGSLPLMRRYFHPDGSQTADPDDRVWGGHEC

Query:  CFSTVTTFVG-DGKIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKDGGTGPL
        CFS VT+F G DGKIREHYVRINRWPRM VSRNEDWSWK+SN   SYSSIADA+KDGGTGPL
Subjt:  CFSTVTTFVG-DGKIREHYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKDGGTGPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCGCCGATCGATCATCCTCTTCCAAAACCCTTCTTCATAAACCCCTCTGCCCTCTCGAGCTTCGAATTCATGGCGCGGAACGACTTCCTTGGAGGCGGAGCGCG
GTGGAAAGCAAGGAAGAAGAAGCGAGCGAATGTCTCAGATGAAAATGGATCCCAAAATGTTCTTCTCCAAGATCCTTTGCAAGTTTTAGGTCCTGATCTCTTAATGGCGA
TACTGAGCTACGTTGATGCACGCAGCGTGGCACTTTCTCTTCTTGTCTCTCGGTCCTGGTACGCTGTTGCTTCCAGCGATTGCCTGTGGAGTTCGAAGTGTGTGGAATTG
TGGTTTGGGAAAGCACATATCCCTAGATTGGTGCACATCCGAGGTCTTCCAAAGCTGGCTGCCTATTCATTATCCATCATGGATGGCAAACGAACTCGCATTATGAGGGA
GGATTTATGTGATCATGCTTGGCAATTTCACTTCAATAAGGAAGCTCCCATATATTGGCGAGATCTTGATCCATATTGGCAAGGTAGCCTTCCTCTAATGCGACGTTATT
TCCATCCCGATGGGAGCCAAACTGCAGATCCTGATGACAGAGTATGGGGTGGCCATGAATGCTGTTTTTCCACTGTAACCACTTTTGTTGGTGATGGGAAGATCAGAGAA
CACTATGTGAGGATTAACAGATGGCCAAGAATGTTTGTGTCAAGGAATGAAGATTGGAGCTGGAAGATGTCGAATCACTTCACCTCGTACTCGAGTATAGCCGATGCTGA
GAAGGATGGTGGGACGGGGCCTCTTTAA
mRNA sequenceShow/hide mRNA sequence
TGTATTTCCAACCGCACTTCTCTACGGATAAATTTACAAACTACAATATTCGCAAATGGAATCGCCGATCGATCATCCTCTTCCAAAACCCTTCTTCATAAACCCCTCTG
CCCTCTCGAGCTTCGAATTCATGGCGCGGAACGACTTCCTTGGAGGCGGAGCGCGGTGGAAAGCAAGGAAGAAGAAGCGAGCGAATGTCTCAGATGAAAATGGATCCCAA
AATGTTCTTCTCCAAGATCCTTTGCAAGTTTTAGGTCCTGATCTCTTAATGGCGATACTGAGCTACGTTGATGCACGCAGCGTGGCACTTTCTCTTCTTGTCTCTCGGTC
CTGGTACGCTGTTGCTTCCAGCGATTGCCTGTGGAGTTCGAAGTGTGTGGAATTGTGGTTTGGGAAAGCACATATCCCTAGATTGGTGCACATCCGAGGTCTTCCAAAGC
TGGCTGCCTATTCATTATCCATCATGGATGGCAAACGAACTCGCATTATGAGGGAGGATTTATGTGATCATGCTTGGCAATTTCACTTCAATAAGGAAGCTCCCATATAT
TGGCGAGATCTTGATCCATATTGGCAAGGTAGCCTTCCTCTAATGCGACGTTATTTCCATCCCGATGGGAGCCAAACTGCAGATCCTGATGACAGAGTATGGGGTGGCCA
TGAATGCTGTTTTTCCACTGTAACCACTTTTGTTGGTGATGGGAAGATCAGAGAACACTATGTGAGGATTAACAGATGGCCAAGAATGTTTGTGTCAAGGAATGAAGATT
GGAGCTGGAAGATGTCGAATCACTTCACCTCGTACTCGAGTATAGCCGATGCTGAGAAGGATGGTGGGACGGGGCCTCTTTAATGTTGTTAACATGGTTTAATCAAATTA
GTTTCCTATTGGATTTCTTGTCTTCTGATGAGTGACATTATCCTTAAAGGGTCAAACGAGTAGTGCTGAATGCCTGTTTGCTCTTTCTTGTAGAGGCTGTTGTTTTGCTG
TGTACAGAATTTTGGGAGTCATAGGAATTGGTATTGGTGATCCTTGGTTTTGGATCACTTGTTCTTTTGATCCTTTGCATAATAATGATAGTAGATTTTGTATGTTTGTA
GATGTTGCTCACTTGTAAGTAGTAAGATTTGAAATTAATAAATTGAGTTTATGTTCAA
Protein sequenceShow/hide protein sequence
MESPIDHPLPKPFFINPSALSSFEFMARNDFLGGGARWKARKKKRANVSDENGSQNVLLQDPLQVLGPDLLMAILSYVDARSVALSLLVSRSWYAVASSDCLWSSKCVEL
WFGKAHIPRLVHIRGLPKLAAYSLSIMDGKRTRIMREDLCDHAWQFHFNKEAPIYWRDLDPYWQGSLPLMRRYFHPDGSQTADPDDRVWGGHECCFSTVTTFVGDGKIRE
HYVRINRWPRMFVSRNEDWSWKMSNHFTSYSSIADAEKDGGTGPL