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Tan0010320 (gene) of Snake gourd v1 genome

Gene IDTan0010320
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein RALF-like 10
Genome locationLG09:43114499..43114714
RNA-Seq ExpressionTan0010320
SyntenyTan0010320
Gene Ontology termsNA
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020863.1 hypothetical protein SDJN02_17551, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-0749.3Show/hide
Query:  ICLVLFIMLVTGQEVVADR------TYLKLVDCNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRGG
        ICL L  ML+T Q+V+ ++       YLK ++C+ PNPP  CS    +G   V AN Y RGCSAI+RCRGG
Subjt:  ICLVLFIMLVTGQEVVADR------TYLKLVDCNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRGG

KAG7020864.1 hypothetical protein SDJN02_17552, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-0755.17Show/hide
Query:  MLVTGQEVVADRTYLKLVDCNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRGG
        M++T  EV+AD  +LKL +C  PNPP  C + N  G  PV AN Y RGCSA +RCRGG
Subjt:  MLVTGQEVVADRTYLKLVDCNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRGG

XP_022947821.1 protein RALF-like 10 [Cucurbita moschata]6.1e-1057.14Show/hide
Query:  QSWLICLVLFIMLVTGQEVVADRTYLKLVD-CNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRGG
        +SWLICLVL  MLV  Q+V ++  +LK  D C QPNPPP CS  N      V AN Y RGCS I RCRGG
Subjt:  QSWLICLVLFIMLVTGQEVVADRTYLKLVD-CNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRGG

XP_023533089.1 protein RALF-like 10 [Cucurbita pepo subsp. pepo]3.9e-0955.71Show/hide
Query:  QSWLICLVLFIMLVTGQEVVADRTYLKLVD-CNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRGG
        +SWLIC+VL  MLV  QEV ++  +LK  D C QPNPP  CS  N      V AN Y RGCS I RCRGG
Subjt:  QSWLICLVLFIMLVTGQEVVADRTYLKLVD-CNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRGG

XP_038877580.1 protein RALF-like 11 [Benincasa hispida]1.1e-1158.57Show/hide
Query:  QSWLICLVLFIMLVTGQEVVADRTYLKLVD-CNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRGG
        +SWLIC+V   MLV G  V A++ YL+ +D CNQPNPPP+CS    E    V AN Y RGCSAI+RCRGG
Subjt:  QSWLICLVLFIMLVTGQEVVADRTYLKLVD-CNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRGG

TrEMBL top hitse value%identityAlignment
A0A0A0LI94 Uncharacterized protein2.7e-1160Show/hide
Query:  QSWLICLVLFIMLVTGQEVVADRTYLKLVD-CNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRGG
        +SWLICL L  MLV GQEV A+  +LK +D CNQP+PPP+C  PN +      AN Y R CSAINRCRGG
Subjt:  QSWLICLVLFIMLVTGQEVVADRTYLKLVD-CNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRGG

A0A0A0M0X3 Uncharacterized protein2.3e-0752.17Show/hide
Query:  QSWLICLVLFIMLVTGQEVVADRTYLKLVD-CNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRG
        +SWLIC+V   MLV  QEV A   +LK  + C+ P+PPPSCSS   +       N Y RGCSAI+RCRG
Subjt:  QSWLICLVLFIMLVTGQEVVADRTYLKLVD-CNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRG

A0A178VZM1 RALFL109.8e-0640Show/hide
Query:  QSWLICLVLFIMLVTGQEVVADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR
        ++W+ICL++    V  + V + R YL    +  C  PNPPP C  P  +   P  AN Y RGCS I RC+
Subjt:  QSWLICLVLFIMLVTGQEVVADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR

A0A5S9WZ68 (thale cress) hypothetical protein1.3e-0542.86Show/hide
Query:  QSWLICLVLFIMLVTGQEVVADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR
        ++WLICL++    V   E V  R Y++   +  C  PNPPP C+ P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLFIMLVTGQEVVADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR

A0A6J1G7J2 protein RALF-like 102.9e-1057.14Show/hide
Query:  QSWLICLVLFIMLVTGQEVVADRTYLKLVD-CNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRGG
        +SWLICLVL  MLV  Q+V ++  +LK  D C QPNPPP CS  N      V AN Y RGCS I RCRGG
Subjt:  QSWLICLVLFIMLVTGQEVVADRTYLKLVD-CNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRGG

SwissProt top hitse value%identityAlignment
F4ISE1 Protein RALF-like 121.1e-0642.86Show/hide
Query:  QSWLICLVLFIMLVTGQEVVADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR
        ++W+I L L I  V   E V  R Y++   +  C  PNPPP C+ P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLFIMLVTGQEVVADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR

F4ISE2 Protein RALF-like 131.7e-0741.43Show/hide
Query:  QSWLICLVLFIMLVTGQEVVADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR
        ++W+ICL++    V   E V  R Y++   +  C  PNPPP C+ P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLFIMLVTGQEVVADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR

O64466 Protein RALF-like 113.5e-0842.86Show/hide
Query:  QSWLICLVLFIMLVTGQEVVADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR
        ++WLICL++    V   E V  R Y++   +  C  PNPPP C+ P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLFIMLVTGQEVVADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR

O65919 Protein RALF-like 101.6e-0538.81Show/hide
Query:  LICLVLFIMLVTGQEVVADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR
        +ICL++    V    V + R +L    +  C  PNPPP C  P  +   P  AN Y RGCS I RC+
Subjt:  LICLVLFIMLVTGQEVVADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR

Q9LSG0 Protein RALF-like 259.4e-0643.66Show/hide
Query:  MKQSWLICLVLFIMLVTGQEVVAD--RTYLKLVDCNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR
        MK   +I LV+  +L+ G+    D  R YL L  C +PN PP C     +  TPV  N Y+RGC+ INRCR
Subjt:  MKQSWLICLVLFIMLVTGQEVVAD--RTYLKLVDCNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR

Arabidopsis top hitse value%identityAlignment
AT2G19020.1 ralf-like 101.1e-0638.81Show/hide
Query:  LICLVLFIMLVTGQEVVADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR
        +ICL++    V    V + R +L    +  C  PNPPP C  P  +   P  AN Y RGCS I RC+
Subjt:  LICLVLFIMLVTGQEVVADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR

AT2G19030.1 ralf-like 112.5e-0942.86Show/hide
Query:  QSWLICLVLFIMLVTGQEVVADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR
        ++WLICL++    V   E V  R Y++   +  C  PNPPP C+ P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLFIMLVTGQEVVADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR

AT2G19040.1 RALF-like 127.9e-0842.86Show/hide
Query:  QSWLICLVLFIMLVTGQEVVADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR
        ++W+I L L I  V   E V  R Y++   +  C  PNPPP C+ P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLFIMLVTGQEVVADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR

AT2G19045.1 RALF-like 131.2e-0841.43Show/hide
Query:  QSWLICLVLFIMLVTGQEVVADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR
        ++W+ICL++    V   E V  R Y++   +  C  PNPPP C+ P  E   P   N Y+RGCS I+RCR
Subjt:  QSWLICLVLFIMLVTGQEVVADRTYLK---LVDCNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR

AT3G25165.1 ralf-like 256.7e-0743.66Show/hide
Query:  MKQSWLICLVLFIMLVTGQEVVAD--RTYLKLVDCNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR
        MK   +I LV+  +L+ G+    D  R YL L  C +PN PP C     +  TPV  N Y+RGC+ INRCR
Subjt:  MKQSWLICLVLFIMLVTGQEVVAD--RTYLKLVDCNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAATCATGGCTCATATGTTTAGTTCTTTTTATTATGTTGGTGACAGGACAAGAAGTAGTAGCGGACAGAACTTATCTTAAACTAGTGGACTGCAACCAACCAAA
CCCACCACCAAGTTGTTCTTCACCGAATGGAGAAGGTTCTACACCTGTTTCTGCTAATGCCTATACTCGAGGTTGCTCTGCCATCAATCGTTGTCGTGGAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCAATCATGGCTCATATGTTTAGTTCTTTTTATTATGTTGGTGACAGGACAAGAAGTAGTAGCGGACAGAACTTATCTTAAACTAGTGGACTGCAACCAACCAAA
CCCACCACCAAGTTGTTCTTCACCGAATGGAGAAGGTTCTACACCTGTTTCTGCTAATGCCTATACTCGAGGTTGCTCTGCCATCAATCGTTGTCGTGGAGGATGA
Protein sequenceShow/hide protein sequence
MKQSWLICLVLFIMLVTGQEVVADRTYLKLVDCNQPNPPPSCSSPNGEGSTPVSANAYTRGCSAINRCRGG