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Tan0010326 (gene) of Snake gourd v1 genome

Gene IDTan0010326
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein PAIR1 isoform X1
Genome locationLG10:1957124..1957947
RNA-Seq ExpressionTan0010326
SyntenyTan0010326
Gene Ontology termsGO:0009553 - embryo sac development (biological process)
GO:0009555 - pollen development (biological process)
GO:0042138 - meiotic DNA double-strand break formation (biological process)
GO:0048236 - plant-type sporogenesis (biological process)
GO:0051026 - chiasma assembly (biological process)
InterPro domainsIPR034546 - Protein PAIR1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008438046.1 PREDICTED: protein PAIR1 isoform X1 [Cucumis melo]5.6e-2797.22Show/hide
Query:  MRLKINKACDLSSISVLPPQSRRSNALITGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQ
        MRLKINKACDLSSISVLPPQSRR NAL TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQ
Subjt:  MRLKINKACDLSSISVLPPQSRRSNALITGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQ
XP_008438047.1 PREDICTED: protein PAIR1 isoform X2 [Cucumis melo]5.6e-2797.22Show/hide
Query:  MRLKINKACDLSSISVLPPQSRRSNALITGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQ
        MRLKINKACDLSSISVLPPQSRR NAL TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQ
Subjt:  MRLKINKACDLSSISVLPPQSRRSNALITGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQ
XP_008438048.1 PREDICTED: protein PAIR1 isoform X3 [Cucumis melo]5.6e-2797.22Show/hide
Query:  MRLKINKACDLSSISVLPPQSRRSNALITGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQ
        MRLKINKACDLSSISVLPPQSRR NAL TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQ
Subjt:  MRLKINKACDLSSISVLPPQSRRSNALITGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQ
XP_038882627.1 putative recombination initiation defects 3 isoform X1 [Benincasa hispida]4.3e-2797.22Show/hide
Query:  MRLKINKACDLSSISVLPPQSRRSNALITGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQ
        MRLKINKACDLSSISVLPP SRRSNAL TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQ
Subjt:  MRLKINKACDLSSISVLPPQSRRSNALITGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQ
XP_038882642.1 putative recombination initiation defects 3 isoform X2 [Benincasa hispida]4.3e-2797.22Show/hide
Query:  MRLKINKACDLSSISVLPPQSRRSNALITGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQ
        MRLKINKACDLSSISVLPP SRRSNAL TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQ
Subjt:  MRLKINKACDLSSISVLPPQSRRSNALITGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQ
TrEMBL top hitse value%identityAlignment
A0A1S3AV35 protein PAIR1 isoform X22.7e-2797.22Show/hide
Query:  MRLKINKACDLSSISVLPPQSRRSNALITGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQ
        MRLKINKACDLSSISVLPPQSRR NAL TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQ
Subjt:  MRLKINKACDLSSISVLPPQSRRSNALITGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQ
A0A1S3AVJ5 protein PAIR1 isoform X32.7e-2797.22Show/hide
Query:  MRLKINKACDLSSISVLPPQSRRSNALITGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQ
        MRLKINKACDLSSISVLPPQSRR NAL TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQ
Subjt:  MRLKINKACDLSSISVLPPQSRRSNALITGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQ
A0A1S4DSK1 protein PAIR1 isoform X12.7e-2797.22Show/hide
Query:  MRLKINKACDLSSISVLPPQSRRSNALITGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQ
        MRLKINKACDLSSISVLPPQSRR NAL TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQ
Subjt:  MRLKINKACDLSSISVLPPQSRRSNALITGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQ
A0A6J1D122 protein PAIR1 isoform X21.5e-2595.83Show/hide
Query:  MRLKINKACDLSSISVLPPQSRRSNALITGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQ
        MRLKINKACDLSSISVLPPQSRRSNA  TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTN+Q
Subjt:  MRLKINKACDLSSISVLPPQSRRSNALITGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQ
A0A6J1D1C7 protein PAIR1 isoform X11.5e-2595.83Show/hide
Query:  MRLKINKACDLSSISVLPPQSRRSNALITGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQ
        MRLKINKACDLSSISVLPPQSRRSNA  TGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTN+Q
Subjt:  MRLKINKACDLSSISVLPPQSRRSNALITGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQ
SwissProt top hitse value%identityAlignment
Q0WWX5 Putative recombination initiation defects 31.7e-1056Show/hide
Query:  MRLKINKACDLSSISVLPPQSRRSNALITGQQAPQLRSQPSQQSFSQGLSSQH---GMYSQLSQNSFDEVVTNEQ
        M++ INKACDL SISV PP  RRS      Q + QLRSQ SQQSFSQG SS     G +SQ++Q+S DE++ N+Q
Subjt:  MRLKINKACDLSSISVLPPQSRRSNALITGQQAPQLRSQPSQQSFSQGLSSQH---GMYSQLSQNSFDEVVTNEQ
Q75RY2 Protein PAIR18.2e-0549.35Show/hide
Query:  MRLKINKACDLSSISVLPPQ--SRRSNALITGQQAPQLRSQP-------SQQSFSQGLSSQ--HGMYSQLSQNSFDE
        M+LK+NKACD++SISVLPP+     S A  +G  A  + SQP       SQQSFSQG S+   H   SQ SQ S D+
Subjt:  MRLKINKACDLSSISVLPPQ--SRRSNALITGQQAPQLRSQP-------SQQSFSQGLSSQ--HGMYSQLSQNSFDE
Arabidopsis top hitse value%identityAlignment
AT1G01690.1 putative recombination initiation defects 31.2e-1156Show/hide
Query:  MRLKINKACDLSSISVLPPQSRRSNALITGQQAPQLRSQPSQQSFSQGLSSQH---GMYSQLSQNSFDEVVTNEQ
        M++ INKACDL SISV PP  RRS      Q + QLRSQ SQQSFSQG SS     G +SQ++Q+S DE++ N+Q
Subjt:  MRLKINKACDLSSISVLPPQSRRSNALITGQQAPQLRSQPSQQSFSQGLSSQH---GMYSQLSQNSFDEVVTNEQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGCTGAAGATAAACAAGGCCTGTGATCTCAGTTCTATCTCCGTTCTTCCTCCTCAATCCAGGAGGTCAAATGCGTTAATCACTGGGCAGCAAGCACCACAGTTGCG
ATCACAACCTTCGCAACAGTCCTTTTCTCAGGGTCTGTCTTCTCAGCACGGCATGTATTCTCAGCTCTCTCAGAACTCTTTCGACGAAGTCGTGACAAATGAACAGGTGA
ATCTCGGTTCTTCTCTGGATTTTCAGGTTTTAAGACTTTGTTTGTCCATTAAGAAATGGAGGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCGGCTGAAGATAAACAAGGCCTGTGATCTCAGTTCTATCTCCGTTCTTCCTCCTCAATCCAGGAGGTCAAATGCGTTAATCACTGGGCAGCAAGCACCACAGTTGCG
ATCACAACCTTCGCAACAGTCCTTTTCTCAGGGTCTGTCTTCTCAGCACGGCATGTATTCTCAGCTCTCTCAGAACTCTTTCGACGAAGTCGTGACAAATGAACAGGTGA
ATCTCGGTTCTTCTCTGGATTTTCAGGTTTTAAGACTTTGTTTGTCCATTAAGAAATGGAGGAAATGA
Protein sequenceShow/hide protein sequence
MRLKINKACDLSSISVLPPQSRRSNALITGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQNSFDEVVTNEQVNLGSSLDFQVLRLCLSIKKWRK