CuGenDBv2

Gene ID	Tan0010354
Organism	Trichosanthes anguina (Snake gourd v1)
Description	protein LOW PSII ACCUMULATION 3, chloroplastic
Genome location	LG06:3433891..3439397
RNA-Seq Expression	Tan0010354
Synteny	Tan0010354
Gene Ontology terms	NA
InterPro domains	IPR018962 - Domain of unknown function DUF1995 IPR044687 - Protein LOW PSII ACCUMULATION 3

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6575630.1 Protein LOW PSII ACCUMULATION 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

2.8e-205

92.58

Show/hide

Query:  MAIMAFLSSPPRIPSLVRPFHTNLLLSPISSPFSALRRSNRSNLFGAQTLTTSGFCSRIHCSDKERAARVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA
        MAIMAFLSSPP IPSLVRP H+N L SPISS FSALRRS RS+LFGAQTL TSGFC RIHCSDKERAA VT+SSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPRIPSLVRPFHTNLLLSPISSPFSALRRSNRSNLFGAQTLTTSGFCSRIHCSDKERAARVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGKTRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARKLQENRGTRSCIVFPDKPEKRRASQLFKTALDLIDGITVSSLDDVPAGPVTSFFRS
        YALEDGK RLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVAR LQE RGTRSCIVFPDKP+K RASQLFKTALD IDGIT+SSLDDVPAGPVTSFFRS
Subjt:  YALEDGKTRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARKLQENRGTRSCIVFPDKPEKRRASQLFKTALDLIDGITVSSLDDVPAGPVTSFFRS

Query:  VRSTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
        +R+TLDFDFED+NAGRWTSS+PPSLYIFINCSTRELA+IEKYVETFASSIPTL+FNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTV 
Subjt:  VRSTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA

Query:  IAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKSATWWEEDADSEISSAWRS
        IAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYK+ATWWEED DSE+SSAWRS
Subjt:  IAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKSATWWEEDADSEISSAWRS

XP_022954402.1 protein LOW PSII ACCUMULATION 3, chloroplastic [Cucurbita moschata]

7.3e-206

92.58

Show/hide

Query:  MAIMAFLSSPPRIPSLVRPFHTNLLLSPISSPFSALRRSNRSNLFGAQTLTTSGFCSRIHCSDKERAARVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA
        MAIMAFLSSPP IPSLVRPFH+N L SPI+S FSALRRS RS+LFGAQTL TSGFC RIHCSDKERAA VT+SSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPRIPSLVRPFHTNLLLSPISSPFSALRRSNRSNLFGAQTLTTSGFCSRIHCSDKERAARVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGKTRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARKLQENRGTRSCIVFPDKPEKRRASQLFKTALDLIDGITVSSLDDVPAGPVTSFFRS
        YALEDGK RLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVAR LQE RGTRSCIVFPDKP+K RASQLFKTALD IDGIT+SSLDDVPAGPVTSFFRS
Subjt:  YALEDGKTRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARKLQENRGTRSCIVFPDKPEKRRASQLFKTALDLIDGITVSSLDDVPAGPVTSFFRS

Query:  VRSTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
        +R+TLDFDFED+NAGRWTSS+PPSLYIFINCSTRELA+IEKYVETFASSIPTL+FNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTV 
Subjt:  VRSTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA

Query:  IAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKSATWWEEDADSEISSAWRS
        IAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYK+ATWWEED DSE+SSAWRS
Subjt:  IAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKSATWWEEDADSEISSAWRS

XP_022992481.1 protein LOW PSII ACCUMULATION 3, chloroplastic [Cucurbita maxima]

1.2e-205

92.33

Show/hide

Query:  MAIMAFLSSPPRIPSLVRPFHTNLLLSPISSPFSALRRSNRSNLFGAQTLTTSGFCSRIHCSDKERAARVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA
        MAIMAFLSSPP IPSLVRPFH+N L SPISS FSALRRS RS+LFGAQTL TSGFC RIHCSDKERAA VT+SSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPRIPSLVRPFHTNLLLSPISSPFSALRRSNRSNLFGAQTLTTSGFCSRIHCSDKERAARVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGKTRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARKLQENRGTRSCIVFPDKPEKRRASQLFKTALDLIDGITVSSLDDVPAGPVTSFFRS
        YALEDGK RLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVAR LQE RGTRSCIVFPDKP+K RASQLFKTALD IDGIT+SSLDD+PAGPVTSFFRS
Subjt:  YALEDGKTRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARKLQENRGTRSCIVFPDKPEKRRASQLFKTALDLIDGITVSSLDDVPAGPVTSFFRS

Query:  VRSTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
        +R+TLDFDFED+NAGRWTSS+PPSLYIFINCSTRELA+IEKYVETFASSIPTL+FNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTV 
Subjt:  VRSTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA

Query:  IAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKSATWWEEDADSEISSAWRS
        IAPYIVNYSGALFRQYPGPWQVMLKQ DNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYK+ATWWEED DSE+SSAWRS
Subjt:  IAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKSATWWEEDADSEISSAWRS

XP_023547388.1 protein LOW PSII ACCUMULATION 3, chloroplastic [Cucurbita pepo subsp. pepo]

4.7e-205

92.07

Show/hide

Query:  MAIMAFLSSPPRIPSLVRPFHTNLLLSPISSPFSALRRSNRSNLFGAQTLTTSGFCSRIHCSDKERAARVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA
        MAIMAFLSSPP IPSLVRPFH+N L SPISS FSALRRS RS+LFGAQTL TSGFC RIHCSDKERAA VT+SSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPRIPSLVRPFHTNLLLSPISSPFSALRRSNRSNLFGAQTLTTSGFCSRIHCSDKERAARVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGKTRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARKLQENRGTRSCIVFPDKPEKRRASQLFKTALDLIDGITVSSLDDVPAGPVTSFFRS
        YALEDGK RLEIDFPPLPSNISSYKGSSDEFIDANIQL+LAVAR LQE RGTRSCIVFPDKP+K RASQLFKTALD IDGIT+SSLDDVPAGPVTSFFRS
Subjt:  YALEDGKTRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARKLQENRGTRSCIVFPDKPEKRRASQLFKTALDLIDGITVSSLDDVPAGPVTSFFRS

Query:  VRSTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
        +R+TLDFDFED+NAGRWTSS+PPSLYIFINCSTRELA+IEKYVETFASSIPTL+FNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTV 
Subjt:  VRSTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA

Query:  IAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKSATWWEEDADSEISSAWRS
        IAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETK+ELLRVLGLQEEQGSSLEFLRRGYK++TWWEED DSE+SSAWRS
Subjt:  IAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKSATWWEEDADSEISSAWRS

XP_038900014.1 protein LOW PSII ACCUMULATION 3, chloroplastic [Benincasa hispida]

1.1e-204

92.33

Show/hide

Query:  MAIMAFLSSPPRIPSLVRPFHTNLLLSPISSPFSALRRSNRSNLFGAQTLTTSGFCSRIHCSDKERAARVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA
        MAIMAF+SSPP+IPSL R FH+N L SPISS F ALRRS RS+LFGAQTL TSGFC RIHC DKER + VTQSSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPRIPSLVRPFHTNLLLSPISSPFSALRRSNRSNLFGAQTLTTSGFCSRIHCSDKERAARVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGKTRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARKLQENRGTRSCIVFPDKPEKRRASQLFKTALDLIDGITVSSLDDVPAGPVTSFFRS
        YALEDGK RLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVAR LQE RGTRSCIVFPDKPEKRRASQLFKTALD IDGITVSSLDDVPAGPVTSFFRS
Subjt:  YALEDGKTRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARKLQENRGTRSCIVFPDKPEKRRASQLFKTALDLIDGITVSSLDDVPAGPVTSFFRS

Query:  VRSTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
        VR+TLDFDFED+N+GRWTSSDPPSLYIFINCSTREL LIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
Subjt:  VRSTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA

Query:  IAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKSATWWEEDADSEISSAWRS
        +APYIVNYSGALFRQYPGPWQVMLKQ+DNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYK+ATWWEED DSE+SSAWRS
Subjt:  IAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKSATWWEEDADSEISSAWRS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KA03 DUF1995 domain-containing protein

2.9e-200

91.56

Show/hide

Query:  MAIMAFLSSPPRIPSLVRPFHTNLLLSPISSPFSALRRSNRSNLFGAQTLTTSGFCSRIHCSDKERAARVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA
        MAIMAFLSSPP IPSL  PFHTN L SPIS   S+LRRS RS+LFGAQTL  SGFC RIHC DKERAA VTQ SDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPRIPSLVRPFHTNLLLSPISSPFSALRRSNRSNLFGAQTLTTSGFCSRIHCSDKERAARVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGKTRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARKLQENRGTRSCIVFPDKPEKRRASQLFKTALDLIDGITVSSLDDVPAGPVTSFFRS
        YALEDGK RLEIDFPPLPSNISSYKGSSD+FIDANIQLALAVAR LQE RG RSCIVFPDKPEKRRASQLFKTALD IDGITVSSLDDVPAG VTSFFRS
Subjt:  YALEDGKTRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARKLQENRGTRSCIVFPDKPEKRRASQLFKTALDLIDGITVSSLDDVPAGPVTSFFRS

Query:  VRSTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
        VR+TLDFDFEDDNAGRWTSSDPPSLYIFINCSTREL LIEKYVETFASSIP LLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
Subjt:  VRSTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA

Query:  IAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKSATWWEEDADSEISSAWRS
        +APYIVNYSGALFRQY GPWQVMLKQ+DNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYK+ATWWEED DSE+SSAWRS
Subjt:  IAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKSATWWEEDADSEISSAWRS

A0A1S3CFB8 protein LOW PSII ACCUMULATION 3, chloroplastic

2.0e-201

91.56

Show/hide

Query:  MAIMAFLSSPPRIPSLVRPFHTNLLLSPISSPFSALRRSNRSNLFGAQTLTTSGFCSRIHCSDKERAARVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA
        M IMAF+SSPP IPSL RPF +N L SPIS   S+LRRS  S+LFGAQTL  SGFC RIHC DKERAA VTQSSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPRIPSLVRPFHTNLLLSPISSPFSALRRSNRSNLFGAQTLTTSGFCSRIHCSDKERAARVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGKTRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARKLQENRGTRSCIVFPDKPEKRRASQLFKTALDLIDGITVSSLDDVPAGPVTSFFRS
        YALEDGK RLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVAR LQE RGTRSCIVFPDKPEKRRAS+LFKTA+D IDGITVSSLDDVPAGPVTSFFRS
Subjt:  YALEDGKTRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARKLQENRGTRSCIVFPDKPEKRRASQLFKTALDLIDGITVSSLDDVPAGPVTSFFRS

Query:  VRSTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
        VR+TLDFDFEDDNAGRWTSSDPPSLYIFINCSTREL LIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
Subjt:  VRSTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA

Query:  IAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKSATWWEEDADSEISSAWRS
        +APYIVNYSGALFRQYPGPWQVMLKQ+DNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYK+ATWWEED DSE+SSAWRS
Subjt:  IAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKSATWWEEDADSEISSAWRS

A0A5A7UU42 Protein LOW PSII ACCUMULATION 3

1.4e-202

92.07

Show/hide

Query:  MAIMAFLSSPPRIPSLVRPFHTNLLLSPISSPFSALRRSNRSNLFGAQTLTTSGFCSRIHCSDKERAARVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA
        M IMAFLSSPP IPSL RPFH+N L SPIS   S+LRRS  S+LFGAQTL  SGFC RIHC DKERAA VTQSSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPRIPSLVRPFHTNLLLSPISSPFSALRRSNRSNLFGAQTLTTSGFCSRIHCSDKERAARVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGKTRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARKLQENRGTRSCIVFPDKPEKRRASQLFKTALDLIDGITVSSLDDVPAGPVTSFFRS
        YALEDGK RLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVAR LQE RGTRSCIVFPDKPEKRRAS+LFKTA+D IDGITVSSLDDVPAGPVTSFFRS
Subjt:  YALEDGKTRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARKLQENRGTRSCIVFPDKPEKRRASQLFKTALDLIDGITVSSLDDVPAGPVTSFFRS

Query:  VRSTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
        VR+TLDFDFEDDNAGRWTSSDPPSLYIFINCSTREL LIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
Subjt:  VRSTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA

Query:  IAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKSATWWEEDADSEISSAWRS
        +APYIVNYSGALFRQYPGPWQVMLKQ+DNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYK+ATWWEED DSE+SSAWRS
Subjt:  IAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKSATWWEEDADSEISSAWRS

A0A6J1GQW6 protein LOW PSII ACCUMULATION 3, chloroplastic

3.5e-206

92.58

Show/hide

Query:  MAIMAFLSSPPRIPSLVRPFHTNLLLSPISSPFSALRRSNRSNLFGAQTLTTSGFCSRIHCSDKERAARVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA
        MAIMAFLSSPP IPSLVRPFH+N L SPI+S FSALRRS RS+LFGAQTL TSGFC RIHCSDKERAA VT+SSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPRIPSLVRPFHTNLLLSPISSPFSALRRSNRSNLFGAQTLTTSGFCSRIHCSDKERAARVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGKTRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARKLQENRGTRSCIVFPDKPEKRRASQLFKTALDLIDGITVSSLDDVPAGPVTSFFRS
        YALEDGK RLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVAR LQE RGTRSCIVFPDKP+K RASQLFKTALD IDGIT+SSLDDVPAGPVTSFFRS
Subjt:  YALEDGKTRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARKLQENRGTRSCIVFPDKPEKRRASQLFKTALDLIDGITVSSLDDVPAGPVTSFFRS

Query:  VRSTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
        +R+TLDFDFED+NAGRWTSS+PPSLYIFINCSTRELA+IEKYVETFASSIPTL+FNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTV 
Subjt:  VRSTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA

Query:  IAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKSATWWEEDADSEISSAWRS
        IAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYK+ATWWEED DSE+SSAWRS
Subjt:  IAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKSATWWEEDADSEISSAWRS

A0A6J1JTN7 protein LOW PSII ACCUMULATION 3, chloroplastic

6.0e-206

92.33

Show/hide

Query:  MAIMAFLSSPPRIPSLVRPFHTNLLLSPISSPFSALRRSNRSNLFGAQTLTTSGFCSRIHCSDKERAARVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA
        MAIMAFLSSPP IPSLVRPFH+N L SPISS FSALRRS RS+LFGAQTL TSGFC RIHCSDKERAA VT+SSDPKAGVPIYKPKTYEVLVSDAANSLA
Subjt:  MAIMAFLSSPPRIPSLVRPFHTNLLLSPISSPFSALRRSNRSNLFGAQTLTTSGFCSRIHCSDKERAARVTQSSDPKAGVPIYKPKTYEVLVSDAANSLA

Query:  YALEDGKTRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARKLQENRGTRSCIVFPDKPEKRRASQLFKTALDLIDGITVSSLDDVPAGPVTSFFRS
        YALEDGK RLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVAR LQE RGTRSCIVFPDKP+K RASQLFKTALD IDGIT+SSLDD+PAGPVTSFFRS
Subjt:  YALEDGKTRLEIDFPPLPSNISSYKGSSDEFIDANIQLALAVARKLQENRGTRSCIVFPDKPEKRRASQLFKTALDLIDGITVSSLDDVPAGPVTSFFRS

Query:  VRSTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA
        +R+TLDFDFED+NAGRWTSS+PPSLYIFINCSTRELA+IEKYVETFASSIPTL+FNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTV 
Subjt:  VRSTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVA

Query:  IAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKSATWWEEDADSEISSAWRS
        IAPYIVNYSGALFRQYPGPWQVMLKQ DNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYK+ATWWEED DSE+SSAWRS
Subjt:  IAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKSATWWEEDADSEISSAWRS

SwissProt top hits

e value

%identity

Alignment

Q8H0W0 Protein LPA3

2.6e-150

73.58

Show/hide

Query:  LFGAQTLTTSGFCSRIHCSDKERA----ARVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKTRLEIDFPPLPSNISSYKGSSDEFIDANIQLA
        LF + ++ T    SRI C     +    +  + +SDP+ GVP+YKPK+YEVL +DAANSLA+AL+D K+RLEIDFPPLPS+ISSYKGSSD+FIDANIQLA
Subjt:  LFGAQTLTTSGFCSRIHCSDKERA----ARVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKTRLEIDFPPLPSNISSYKGSSDEFIDANIQLA

Query:  LAVARKLQENRGTRSCIVFPDKPEKRRASQLFKTALDLIDGITVSSLDDVPAGPVTSFFRSVRSTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELALI
        + V RKLQE   TR+CIVFPDKPEKRRASQ FK A D +DGI++ SLDD+P   VT+FFRS+RSTLDFDFED+N G W   +PP+LYIFINCSTREL+ I
Subjt:  LAVARKLQENRGTRSCIVFPDKPEKRRASQLFKTALDLIDGITVSSLDDVPAGPVTSFFRSVRSTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELALI

Query:  EKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESET
        EK+VETFASS P LLFNLEL+TLRADLGLLGFPPKDLHYRFLSQFIPVFYIR REYSKTVA+AP+++NY+GALFRQYPGPWQVMLKQ D S+ACVAES T
Subjt:  EKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESET

Query:  RFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKSATWWEEDADSEISSAWRS
        RFTLGETK+ELL+VLGLQEE+GSSLEFLRRGYKSATWWEED + E SS WR+
Subjt:  RFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKSATWWEEDADSEISSAWRS

Arabidopsis top hits

e value

%identity

Alignment

AT1G73060.1 Low PSII Accumulation 3

1.9e-151

73.58

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Query:  LFGAQTLTTSGFCSRIHCSDKERA----ARVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKTRLEIDFPPLPSNISSYKGSSDEFIDANIQLA
        LF + ++ T    SRI C     +    +  + +SDP+ GVP+YKPK+YEVL +DAANSLA+AL+D K+RLEIDFPPLPS+ISSYKGSSD+FIDANIQLA
Subjt:  LFGAQTLTTSGFCSRIHCSDKERA----ARVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKTRLEIDFPPLPSNISSYKGSSDEFIDANIQLA

Query:  LAVARKLQENRGTRSCIVFPDKPEKRRASQLFKTALDLIDGITVSSLDDVPAGPVTSFFRSVRSTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELALI
        + V RKLQE   TR+CIVFPDKPEKRRASQ FK A D +DGI++ SLDD+P   VT+FFRS+RSTLDFDFED+N G W   +PP+LYIFINCSTREL+ I
Subjt:  LAVARKLQENRGTRSCIVFPDKPEKRRASQLFKTALDLIDGITVSSLDDVPAGPVTSFFRSVRSTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELALI

Query:  EKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESET
        EK+VETFASS P LLFNLEL+TLRADLGLLGFPPKDLHYRFLSQFIPVFYIR REYSKTVA+AP+++NY+GALFRQYPGPWQVMLKQ D S+ACVAES T
Subjt:  EKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAIAPYIVNYSGALFRQYPGPWQVMLKQADNSYACVAESET

Query:  RFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKSATWWEEDADSEISSAWRS
        RFTLGETK+ELL+VLGLQEE+GSSLEFLRRGYKSATWWEED + E SS WR+
Subjt:  RFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKSATWWEEDADSEISSAWRS

AT5G48790.1 Domain of unknown function (DUF1995)

2.9e-11

26.69

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Query:  PKTYEVLVSDAANSLAYALEDGKTRLEIDFPPLPSNISSYKGSSD---EFIDANIQLALAVARKLQENRGTRSCIVFPDKPEKRRASQ-LFKTALDLIDG
        P+ Y  L++ A  ++  AL+D K  +EI+FP   S ++S  G  +   E  ++   +     R L   +   + I FP+  E + A + +F      +D 
Subjt:  PKTYEVLVSDAANSLAYALEDGKTRLEIDFPPLPSNISSYKGSSD---EFIDANIQLALAVARKLQENRGTRSCIVFPDKPEKRRASQ-LFKTALDLIDG

Query:  ITVSSLDDVPAGPVTSFFRSVRSTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELALIEK-YVETFASSIPTL-LFNLELETLRADLGLLGFPPKDLHY
        +T  SL +        FF  V+           A R    D   L  +   +  E+ ++E+ Y E   ++   L +FN EL+ +R+     G+ PK    
Subjt:  ITVSSLDDVPAGPVTSFFRSVRSTLDFDFEDDNAGRWTSSDPPSLYIFINCSTRELALIEK-YVETFASSIPTL-LFNLELETLRADLGLLGFPPKDLHY

Query:  RFLSQFIPVFYIRIREYSKT----VAIAPYIVNY----SGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELL
                 FY ++   +KT    +    YI N+     G LFR YPGPWQV L++  N Y CV + E+  +L E   ++L
Subjt:  RFLSQFIPVFYIRIREYSKT----VAIAPYIVNY----SGALFRQYPGPWQVMLKQADNSYACVAESETRFTLGETKDELL

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCGATCATGGCGTTTCTCTCTTCACCACCACGCATTCCCTCTCTGGTTCGACCATTTCACACCAACCTTCTCCTCTCTCCCATTTCATCTCCCTTCAGTGCACTACG
GCGTTCTAATCGGTCCAATTTATTTGGCGCTCAAACTTTGACGACTTCGGGTTTTTGCTCTAGGATACACTGCAGTGACAAAGAACGAGCTGCACGGGTTACTCAGAGTT
CCGATCCTAAGGCTGGAGTTCCGATTTATAAGCCCAAAACCTACGAGGTGCTAGTCTCCGATGCTGCGAATTCTCTTGCTTATGCTCTGGAAGATGGAAAAACCCGCTTG
GAGATTGATTTCCCTCCCCTGCCTAGCAACATTTCCTCGTATAAGGGATCTTCAGATGAGTTCATTGATGCAAATATTCAACTTGCCCTGGCTGTTGCAAGGAAGCTTCA
AGAAAATAGAGGAACTAGATCTTGCATTGTGTTTCCAGATAAGCCAGAGAAGCGTAGAGCTTCACAGCTCTTCAAAACAGCTCTTGACTTGATTGATGGAATAACTGTAA
GTTCCCTGGATGATGTCCCTGCTGGACCTGTCACATCTTTCTTCAGATCTGTTCGAAGCACCCTTGATTTTGATTTTGAAGATGACAATGCAGGTCGTTGGACATCTAGT
GACCCTCCCTCACTGTACATATTTATCAATTGTAGCACGCGTGAACTTGCTTTGATAGAGAAGTATGTGGAAACTTTTGCTTCGTCAATCCCCACTCTGTTGTTTAATCT
AGAACTTGAAACGTTGCGTGCAGACTTGGGCTTACTGGGATTTCCTCCCAAAGATTTGCACTATCGATTTCTCTCTCAGTTTATCCCAGTGTTCTACATTCGAATCAGAG
AGTACTCTAAGACAGTAGCAATAGCACCTTATATTGTTAATTACAGTGGAGCATTGTTTCGTCAATACCCTGGGCCTTGGCAAGTGATGCTAAAACAAGCAGATAATTCT
TATGCTTGCGTTGCAGAGAGTGAGACAAGGTTCACCCTTGGTGAAACAAAAGATGAACTACTGAGGGTCCTTGGACTACAGGAGGAACAAGGAAGCTCGTTAGAATTTCT
CCGCAGGGGCTACAAGTCTGCCACTTGGTGGGAAGAAGATGCCGACTCTGAAATATCTTCAGCATGGCGTAGTTGA

mRNA sequence

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CAATCGGTCTGTAAAGGTGTTAAAGAAAATATTCGAGAAGAGAGGGGACCCGCGGGAAAATCGTAGATGTGGCGTCTTCAAGCTCGTTATCGTCTCATCCAAACGACCGG
CTGTCTTTTCCCCGGCGACTGAACTTCCACTGAGAACTTCTGAGAGCTCAGCCATGGCGATCATGGCGTTTCTCTCTTCACCACCACGCATTCCCTCTCTGGTTCGACCA
TTTCACACCAACCTTCTCCTCTCTCCCATTTCATCTCCCTTCAGTGCACTACGGCGTTCTAATCGGTCCAATTTATTTGGCGCTCAAACTTTGACGACTTCGGGTTTTTG
CTCTAGGATACACTGCAGTGACAAAGAACGAGCTGCACGGGTTACTCAGAGTTCCGATCCTAAGGCTGGAGTTCCGATTTATAAGCCCAAAACCTACGAGGTGCTAGTCT
CCGATGCTGCGAATTCTCTTGCTTATGCTCTGGAAGATGGAAAAACCCGCTTGGAGATTGATTTCCCTCCCCTGCCTAGCAACATTTCCTCGTATAAGGGATCTTCAGAT
GAGTTCATTGATGCAAATATTCAACTTGCCCTGGCTGTTGCAAGGAAGCTTCAAGAAAATAGAGGAACTAGATCTTGCATTGTGTTTCCAGATAAGCCAGAGAAGCGTAG
AGCTTCACAGCTCTTCAAAACAGCTCTTGACTTGATTGATGGAATAACTGTAAGTTCCCTGGATGATGTCCCTGCTGGACCTGTCACATCTTTCTTCAGATCTGTTCGAA
GCACCCTTGATTTTGATTTTGAAGATGACAATGCAGGTCGTTGGACATCTAGTGACCCTCCCTCACTGTACATATTTATCAATTGTAGCACGCGTGAACTTGCTTTGATA
GAGAAGTATGTGGAAACTTTTGCTTCGTCAATCCCCACTCTGTTGTTTAATCTAGAACTTGAAACGTTGCGTGCAGACTTGGGCTTACTGGGATTTCCTCCCAAAGATTT
GCACTATCGATTTCTCTCTCAGTTTATCCCAGTGTTCTACATTCGAATCAGAGAGTACTCTAAGACAGTAGCAATAGCACCTTATATTGTTAATTACAGTGGAGCATTGT
TTCGTCAATACCCTGGGCCTTGGCAAGTGATGCTAAAACAAGCAGATAATTCTTATGCTTGCGTTGCAGAGAGTGAGACAAGGTTCACCCTTGGTGAAACAAAAGATGAA
CTACTGAGGGTCCTTGGACTACAGGAGGAACAAGGAAGCTCGTTAGAATTTCTCCGCAGGGGCTACAAGTCTGCCACTTGGTGGGAAGAAGATGCCGACTCTGAAATATC
TTCAGCATGGCGTAGTTGAGCAGCTCGAGTTTCGATTATCTTTCCTCAAACACTTGCATTTTCGGGAGATGCTATTTCAATGACATCGGACACAAGATTCCAACCATATT
TCCTTGTTCTATCAGATGACCTCTTTCTAAAAGACTCTCATGGCTATCTCTTTGAACAGTGTCTGCAGGGAAGTTCTATCTTAAATCTACATCTCTTCTCAGCTCACCAG
CTTCAGAAGACTGACACAAACTTGAATCCAAGTCATCCACCTCTGGAATTCAAGGTAAAGTAATCTTGTACATTTTATAAGTCGCGATGAATTACGATGTGTTGTTCATC
CTCGAGACGAGTTTGGCTTTCTTTTTCCCTCATGTTGCTTGAAAGAGTATAAATCAGGCCTCTCAGAGAGTTTGATCCTTGTCAACAATGAAGTTATTCAACTATTTCCA
TTTTGTGGTTCTCAA

Protein sequence

Show/hide protein sequence

MAIMAFLSSPPRIPSLVRPFHTNLLLSPISSPFSALRRSNRSNLFGAQTLTTSGFCSRIHCSDKERAARVTQSSDPKAGVPIYKPKTYEVLVSDAANSLAYALEDGKTRL
EIDFPPLPSNISSYKGSSDEFIDANIQLALAVARKLQENRGTRSCIVFPDKPEKRRASQLFKTALDLIDGITVSSLDDVPAGPVTSFFRSVRSTLDFDFEDDNAGRWTSS
DPPSLYIFINCSTRELALIEKYVETFASSIPTLLFNLELETLRADLGLLGFPPKDLHYRFLSQFIPVFYIRIREYSKTVAIAPYIVNYSGALFRQYPGPWQVMLKQADNS
YACVAESETRFTLGETKDELLRVLGLQEEQGSSLEFLRRGYKSATWWEEDADSEISSAWRS

Tan0010354 (gene) of Snake gourd v1 genome