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Tan0010393 (gene) of Snake gourd v1 genome

Gene IDTan0010393
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionBeta-galactosidase
Genome locationLG04:85750728..85751153
RNA-Seq ExpressionTan0010393
SyntenyTan0010393
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0005773 - vacuole (cellular component)
GO:0048046 - apoplast (cellular component)
GO:0004565 - beta-galactosidase activity (molecular function)
GO:0030246 - carbohydrate binding (molecular function)
InterPro domainsIPR001944 - Glycoside hydrolase, family 35
IPR017853 - Glycoside hydrolase superfamily
IPR031330 - Glycoside hydrolase 35, catalytic domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040579.1 beta-galactosidase 7-like [Cucumis melo var. makuwa]3.3e-4690.2Show/hide
Query:  MFKLQWLVLPLVAILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFF
        MFKLQW    LVA LACL+FCIGDNV+YDSNAIIINGERRIIFSGSIHYPRSTE MWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSG LDFIKFF
Subjt:  MFKLQWLVLPLVAILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFF

Query:  QI
        Q+
Subjt:  QI

KAA0045403.1 beta-galactosidase-like [Cucumis melo var. makuwa]5.1e-4790.2Show/hide
Query:  MFKLQWLVLPLVAILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFF
        MFKL WLVL L+A LACLSFC G NVTYDSNAIIINGERRII SGSIHYPRSTE MWPDLIQKAKDGGLDAIETYIFWDRHEPQ+RKYDFSGNLDFIKFF
Subjt:  MFKLQWLVLPLVAILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFF

Query:  QI
        Q+
Subjt:  QI

KAA0062481.1 beta-galactosidase 7-like [Cucumis melo var. makuwa]3.3e-4690.2Show/hide
Query:  MFKLQWLVLPLVAILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFF
        MFKLQW    LVA LACL+FCIGDNV+YDSNAIIINGERRIIFSGSIHYPRSTE MWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSG LDFIKFF
Subjt:  MFKLQWLVLPLVAILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFF

Query:  QI
        Q+
Subjt:  QI

TYK27403.1 beta-galactosidase 7-like [Cucumis melo var. makuwa]3.3e-4690.2Show/hide
Query:  MFKLQWLVLPLVAILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFF
        MFKLQW    LVA LACL+FCIGDNV+YDSNAIIINGERRIIFSGSIHYPRSTE MWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSG LDFIKFF
Subjt:  MFKLQWLVLPLVAILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFF

Query:  QI
        Q+
Subjt:  QI

XP_008464891.1 PREDICTED: beta-galactosidase-like [Cucumis melo]5.1e-4790.2Show/hide
Query:  MFKLQWLVLPLVAILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFF
        MFKL WLVL L+A LACLSFC G NVTYDSNAIIINGERRII SGSIHYPRSTE MWPDLIQKAKDGGLDAIETYIFWDRHEPQ+RKYDFSGNLDFIKFF
Subjt:  MFKLQWLVLPLVAILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFF

Query:  QI
        Q+
Subjt:  QI

TrEMBL top hitse value%identityAlignment
A0A1S3CP45 Beta-galactosidase2.5e-4790.2Show/hide
Query:  MFKLQWLVLPLVAILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFF
        MFKL WLVL L+A LACLSFC G NVTYDSNAIIINGERRII SGSIHYPRSTE MWPDLIQKAKDGGLDAIETYIFWDRHEPQ+RKYDFSGNLDFIKFF
Subjt:  MFKLQWLVLPLVAILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFF

Query:  QI
        Q+
Subjt:  QI

A0A5A7TH43 Beta-galactosidase1.6e-4690.2Show/hide
Query:  MFKLQWLVLPLVAILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFF
        MFKLQW    LVA LACL+FCIGDNV+YDSNAIIINGERRIIFSGSIHYPRSTE MWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSG LDFIKFF
Subjt:  MFKLQWLVLPLVAILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFF

Query:  QI
        Q+
Subjt:  QI

A0A5A7TPD9 Beta-galactosidase2.5e-4790.2Show/hide
Query:  MFKLQWLVLPLVAILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFF
        MFKL WLVL L+A LACLSFC G NVTYDSNAIIINGERRII SGSIHYPRSTE MWPDLIQKAKDGGLDAIETYIFWDRHEPQ+RKYDFSGNLDFIKFF
Subjt:  MFKLQWLVLPLVAILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFF

Query:  QI
        Q+
Subjt:  QI

A0A5A7V9Y9 Beta-galactosidase1.6e-4690.2Show/hide
Query:  MFKLQWLVLPLVAILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFF
        MFKLQW    LVA LACL+FCIGDNV+YDSNAIIINGERRIIFSGSIHYPRSTE MWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSG LDFIKFF
Subjt:  MFKLQWLVLPLVAILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFF

Query:  QI
        Q+
Subjt:  QI

A0A5D3DUP4 Beta-galactosidase1.6e-4690.2Show/hide
Query:  MFKLQWLVLPLVAILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFF
        MFKLQW    LVA LACL+FCIGDNV+YDSNAIIINGERRIIFSGSIHYPRSTE MWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSG LDFIKFF
Subjt:  MFKLQWLVLPLVAILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFF

Query:  QI
        Q+
Subjt:  QI

SwissProt top hitse value%identityAlignment
P49676 Beta-galactosidase3.8e-2969.74Show/hide
Query:  VTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFFQ
        V++D  AI I+G+RRI+ SGSIHYPRST +MWPDLI KAKDGGLD IETY+FW+ HEP RR+YDFSGNLD ++F +
Subjt:  VTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFFQ

Q67VU7 Putative beta-galactosidase 102.0e-3063.16Show/hide
Query:  LVLPLVAILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFFQ
        LV  LV +LA  +   G  VTY+  +++I+GERRII SGSIHYPRST EMWPDLI+KAK+GGLDAIETY+FW+ HEP RR+Y+F GN D ++FF+
Subjt:  LVLPLVAILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFFQ

Q7G3T8 Beta-galactosidase 133.8e-2962.11Show/hide
Query:  LVLPLVAILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFFQ
        LV  LV +LA  +      V Y+  +++I+GERRII SGSIHYPRST EMWPDLI+KAK+GGLDAIETY+FW+ HEP RR+Y+F GN D I+FF+
Subjt:  LVLPLVAILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFFQ

Q8RUV9 Beta-galactosidase 15.9e-3060.42Show/hide
Query:  WLVLPLVAILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFFQ
        W+ L ++A+ A    C   +V+YD  +++I+G+RRII SGSIHYPRST EMWPDLI+KAK+GGLDAIETYIFW+ HEP RR+Y+F GN D ++FF+
Subjt:  WLVLPLVAILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFFQ

Q9SCV5 Beta-galactosidase 73.5e-3064.77Show/hide
Query:  ILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFFQ
        ++  LS      V++D  AI ING+RRI+ SGSIHYPRST +MWPDLI KAKDGGLDAIETY+FW+ HEP+RR+YDFSGNLD ++F +
Subjt:  ILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFFQ

Arabidopsis top hitse value%identityAlignment
AT1G31740.1 beta-galactosidase 156.7e-2958.76Show/hide
Query:  VLPLVAILACL---SFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFFQ
        ++ L  IL C+   S      V++D  AI I+G RR++ SGSIHYPRST EMWPDLI+K K+G LDAIETY+FW+ HEP RR+YDFSGNLD I+F +
Subjt:  VLPLVAILACL---SFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFFQ

AT2G28470.1 beta-galactosidase 84.6e-3052.94Show/hide
Query:  MFKLQWLVLPLVAILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFF
        M K++ + + L+ IL  +      NVTYD  A++I+G+R+++ SGSIHYPRST EMWP+LIQK+KDGGLD IETY+FW  HEP++ KY+F G  D +KF 
Subjt:  MFKLQWLVLPLVAILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFF

Query:  QI
        ++
Subjt:  QI

AT2G28470.2 beta-galactosidase 84.6e-3052.94Show/hide
Query:  MFKLQWLVLPLVAILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFF
        M K++ + + L+ IL  +      NVTYD  A++I+G+R+++ SGSIHYPRST EMWP+LIQK+KDGGLD IETY+FW  HEP++ KY+F G  D +KF 
Subjt:  MFKLQWLVLPLVAILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFF

Query:  QI
        ++
Subjt:  QI

AT3G13750.1 beta galactosidase 16.7e-2960.67Show/hide
Query:  ILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFFQI
        +L  L   +  +V+YDS AI ING+RRI+ SGSIHYPRST EMWPDLI+KAK+GGLD I+TY+FW+ HEP   KY F GN D +KF ++
Subjt:  ILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFFQI

AT5G20710.1 beta-galactosidase 72.5e-3164.77Show/hide
Query:  ILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFFQ
        ++  LS      V++D  AI ING+RRI+ SGSIHYPRST +MWPDLI KAKDGGLDAIETY+FW+ HEP+RR+YDFSGNLD ++F +
Subjt:  ILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFFQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTAAGCTTCAATGGCTTGTTCTTCCTCTCGTTGCAATTTTAGCTTGCTTGTCTTTTTGTATAGGAGATAATGTCACCTATGATTCAAATGCCATAATTATCAATGG
TGAACGACGCATTATCTTCTCAGGTTCAATTCATTATCCACGAAGCACCGAAGAGATGTGGCCTGATCTTATACAAAAAGCTAAAGATGGTGGACTTGATGCAATCGAGA
CATACATTTTTTGGGATCGTCATGAGCCTCAACGACGAAAATATGATTTCTCTGGAAATCTAGATTTTATCAAATTCTTCCAAATTTATCCAAGATGCAGGACTTTACGT
TTGGAACTACGGAGGCTTTCCACTGTGGTTGCACAATATGCCGGGAATCCAACTACGAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTAAGCTTCAATGGCTTGTTCTTCCTCTCGTTGCAATTTTAGCTTGCTTGTCTTTTTGTATAGGAGATAATGTCACCTATGATTCAAATGCCATAATTATCAATGG
TGAACGACGCATTATCTTCTCAGGTTCAATTCATTATCCACGAAGCACCGAAGAGATGTGGCCTGATCTTATACAAAAAGCTAAAGATGGTGGACTTGATGCAATCGAGA
CATACATTTTTTGGGATCGTCATGAGCCTCAACGACGAAAATATGATTTCTCTGGAAATCTAGATTTTATCAAATTCTTCCAAATTTATCCAAGATGCAGGACTTTACGT
TTGGAACTACGGAGGCTTTCCACTGTGGTTGCACAATATGCCGGGAATCCAACTACGAACTGA
Protein sequenceShow/hide protein sequence
MFKLQWLVLPLVAILACLSFCIGDNVTYDSNAIIINGERRIIFSGSIHYPRSTEEMWPDLIQKAKDGGLDAIETYIFWDRHEPQRRKYDFSGNLDFIKFFQIYPRCRTLR
LELRRLSTVVAQYAGNPTTN