; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0010406 (gene) of Snake gourd v1 genome

Gene IDTan0010406
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionheterogeneous nuclear ribonucleoprotein U-like protein 1
Genome locationLG02:12035793..12046125
RNA-Seq ExpressionTan0010406
SyntenyTan0010406
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR003877 - SPRY domain
IPR013320 - Concanavalin A-like lectin/glucanase domain superfamily
IPR043136 - B30.2/SPRY domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584032.1 External alternative NAD(P)H-ubiquinone oxidoreductase B3, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]7.9e-5575.34Show/hide
Query:  WSSAISRLKV----MVFQDQLFVSKPVEMNDTATDQQHLCRLDIFRGDSPVGNLGETKQSFGFGGTGKFSNAGKISDYREKFGIGDTIVCVVNLQSNPLA
        WS A + + +      F  ++   +PVEMNDTA DQQHLCRL I  GDSPVGNLGETKQSFGFGGTGKFSNAGK SDY EKFGIGDTIVC VNL+SNPLA
Subjt:  WSSAISRLKV----MVFQDQLFVSKPVEMNDTATDQQHLCRLDIFRGDSPVGNLGETKQSFGFGGTGKFSNAGKISDYREKFGIGDTIVCVVNLQSNPLA

Query:  SIGFSKNGKWLGTTIQFDVGPRGLGVVDSPLRKLQWESTFFPPVLL
        SIGFSKNGKWLGT IQFD GPRGLGVVDSPL KL+WES  FP VLL
Subjt:  SIGFSKNGKWLGTTIQFDVGPRGLGVVDSPLRKLQWESTFFPPVLL

KAG7019645.1 Heterogeneous nuclear ribonucleoprotein U-like protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]7.9e-5575.34Show/hide
Query:  WSSAISRLKV----MVFQDQLFVSKPVEMNDTATDQQHLCRLDIFRGDSPVGNLGETKQSFGFGGTGKFSNAGKISDYREKFGIGDTIVCVVNLQSNPLA
        WS A + + +      F  ++   +PVEMNDTA DQQHLCRL I  GDSPVGNLGETKQSFGFGGTGKFSNAGK SDY EKFGIGDTIVC VNL+SNPLA
Subjt:  WSSAISRLKV----MVFQDQLFVSKPVEMNDTATDQQHLCRLDIFRGDSPVGNLGETKQSFGFGGTGKFSNAGKISDYREKFGIGDTIVCVVNLQSNPLA

Query:  SIGFSKNGKWLGTTIQFDVGPRGLGVVDSPLRKLQWESTFFPPVLL
        SIGFSKNGKWLGT IQFD GPRGLGVVDSPL KL+WES  FP VLL
Subjt:  SIGFSKNGKWLGTTIQFDVGPRGLGVVDSPLRKLQWESTFFPPVLL

XP_022927265.1 heterogeneous nuclear ribonucleoprotein U-like protein 1 [Cucurbita moschata]7.9e-5575.34Show/hide
Query:  WSSAISRLKV----MVFQDQLFVSKPVEMNDTATDQQHLCRLDIFRGDSPVGNLGETKQSFGFGGTGKFSNAGKISDYREKFGIGDTIVCVVNLQSNPLA
        WS A + + +      F  ++   +PVEMNDTA DQQHLCRL I  GDSPVGNLGETKQSFGFGGTGKFSNAGK SDY EKFGIGDTIVC VNL+SNPLA
Subjt:  WSSAISRLKV----MVFQDQLFVSKPVEMNDTATDQQHLCRLDIFRGDSPVGNLGETKQSFGFGGTGKFSNAGKISDYREKFGIGDTIVCVVNLQSNPLA

Query:  SIGFSKNGKWLGTTIQFDVGPRGLGVVDSPLRKLQWESTFFPPVLL
        SIGFSKNGKWLGT IQFD GPRGLGVVDSPL KL+WES  FP VLL
Subjt:  SIGFSKNGKWLGTTIQFDVGPRGLGVVDSPLRKLQWESTFFPPVLL

XP_023519874.1 heterogeneous nuclear ribonucleoprotein U-like protein 1 [Cucurbita pepo subsp. pepo]1.8e-5474.66Show/hide
Query:  WSSAISRLKV----MVFQDQLFVSKPVEMNDTATDQQHLCRLDIFRGDSPVGNLGETKQSFGFGGTGKFSNAGKISDYREKFGIGDTIVCVVNLQSNPLA
        WS A + + +      F  ++   +PVEMNDTA DQQHLCRL I  GDSPVGNLGETKQSFGFGGTGKFSNAGK SDY EKFGIGDTIVC +NL+SNPLA
Subjt:  WSSAISRLKV----MVFQDQLFVSKPVEMNDTATDQQHLCRLDIFRGDSPVGNLGETKQSFGFGGTGKFSNAGKISDYREKFGIGDTIVCVVNLQSNPLA

Query:  SIGFSKNGKWLGTTIQFDVGPRGLGVVDSPLRKLQWESTFFPPVLL
        SIGFSKNGKWLGT IQFD GPRGLGVVDSPL KL+WES  FP VLL
Subjt:  SIGFSKNGKWLGTTIQFDVGPRGLGVVDSPLRKLQWESTFFPPVLL

XP_038893724.1 heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform X2 [Benincasa hispida]3.0e-5487.5Show/hide
Query:  VEMNDTATDQQHLCRLDIFRGDSPVGNLGETKQSFGFGGTGKFSNAGKISDYREKFGIGDTIVCVVNLQSNPLASIGFSKNGKWLGTTIQFDVGPRGLGV
        VEMNDT+ DQQHLCRL I RGDS VGNLGETKQSFGFGG+GKFSNAGK SDY EKFGIGDTIVC VNL+S PLASIGFSKNGKWLGT IQFD GPRGLGV
Subjt:  VEMNDTATDQQHLCRLDIFRGDSPVGNLGETKQSFGFGGTGKFSNAGKISDYREKFGIGDTIVCVVNLQSNPLASIGFSKNGKWLGTTIQFDVGPRGLGV

Query:  VDSPLRKLQWESTFFPPVLL
        VDSPLRKLQWES FFP VLL
Subjt:  VDSPLRKLQWESTFFPPVLL

TrEMBL top hitse value%identityAlignment
A0A6J1CDI5 heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform X33.2e-5474.66Show/hide
Query:  WSSAISRLKV----MVFQDQLFVSKPVEMNDTATDQQHLCRLDIFRGDSPVGNLGETKQSFGFGGTGKFSNAGKISDYREKFGIGDTIVCVVNLQSNPLA
        WS A + + +      F  ++   +PVEM+DT  DQQH+CRL I RGDSPVGNLGETKQSFGFGGTGKFSNAGK SDY EKFGIGDTIVC VNL+S PLA
Subjt:  WSSAISRLKV----MVFQDQLFVSKPVEMNDTATDQQHLCRLDIFRGDSPVGNLGETKQSFGFGGTGKFSNAGKISDYREKFGIGDTIVCVVNLQSNPLA

Query:  SIGFSKNGKWLGTTIQFDVGPRGLGVVDSPLRKLQWESTFFPPVLL
        SIGFSKNGKWLGT IQFD GPRGLGVVDSPLRKLQ ES FFP VLL
Subjt:  SIGFSKNGKWLGTTIQFDVGPRGLGVVDSPLRKLQWESTFFPPVLL

A0A6J1CE04 heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform X43.2e-5474.66Show/hide
Query:  WSSAISRLKV----MVFQDQLFVSKPVEMNDTATDQQHLCRLDIFRGDSPVGNLGETKQSFGFGGTGKFSNAGKISDYREKFGIGDTIVCVVNLQSNPLA
        WS A + + +      F  ++   +PVEM+DT  DQQH+CRL I RGDSPVGNLGETKQSFGFGGTGKFSNAGK SDY EKFGIGDTIVC VNL+S PLA
Subjt:  WSSAISRLKV----MVFQDQLFVSKPVEMNDTATDQQHLCRLDIFRGDSPVGNLGETKQSFGFGGTGKFSNAGKISDYREKFGIGDTIVCVVNLQSNPLA

Query:  SIGFSKNGKWLGTTIQFDVGPRGLGVVDSPLRKLQWESTFFPPVLL
        SIGFSKNGKWLGT IQFD GPRGLGVVDSPLRKLQ ES FFP VLL
Subjt:  SIGFSKNGKWLGTTIQFDVGPRGLGVVDSPLRKLQWESTFFPPVLL

A0A6J1CE66 heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform X23.2e-5474.66Show/hide
Query:  WSSAISRLKV----MVFQDQLFVSKPVEMNDTATDQQHLCRLDIFRGDSPVGNLGETKQSFGFGGTGKFSNAGKISDYREKFGIGDTIVCVVNLQSNPLA
        WS A + + +      F  ++   +PVEM+DT  DQQH+CRL I RGDSPVGNLGETKQSFGFGGTGKFSNAGK SDY EKFGIGDTIVC VNL+S PLA
Subjt:  WSSAISRLKV----MVFQDQLFVSKPVEMNDTATDQQHLCRLDIFRGDSPVGNLGETKQSFGFGGTGKFSNAGKISDYREKFGIGDTIVCVVNLQSNPLA

Query:  SIGFSKNGKWLGTTIQFDVGPRGLGVVDSPLRKLQWESTFFPPVLL
        SIGFSKNGKWLGT IQFD GPRGLGVVDSPLRKLQ ES FFP VLL
Subjt:  SIGFSKNGKWLGTTIQFDVGPRGLGVVDSPLRKLQWESTFFPPVLL

A0A6J1ENE3 heterogeneous nuclear ribonucleoprotein U-like protein 13.8e-5575.34Show/hide
Query:  WSSAISRLKV----MVFQDQLFVSKPVEMNDTATDQQHLCRLDIFRGDSPVGNLGETKQSFGFGGTGKFSNAGKISDYREKFGIGDTIVCVVNLQSNPLA
        WS A + + +      F  ++   +PVEMNDTA DQQHLCRL I  GDSPVGNLGETKQSFGFGGTGKFSNAGK SDY EKFGIGDTIVC VNL+SNPLA
Subjt:  WSSAISRLKV----MVFQDQLFVSKPVEMNDTATDQQHLCRLDIFRGDSPVGNLGETKQSFGFGGTGKFSNAGKISDYREKFGIGDTIVCVVNLQSNPLA

Query:  SIGFSKNGKWLGTTIQFDVGPRGLGVVDSPLRKLQWESTFFPPVLL
        SIGFSKNGKWLGT IQFD GPRGLGVVDSPL KL+WES  FP VLL
Subjt:  SIGFSKNGKWLGTTIQFDVGPRGLGVVDSPLRKLQWESTFFPPVLL

A0A6J1KKX3 heterogeneous nuclear ribonucleoprotein U-like protein 12.5e-5475.34Show/hide
Query:  WSSAISRLKV----MVFQDQLFVSKPVEMNDTATDQQHLCRLDIFRGDSPVGNLGETKQSFGFGGTGKFSNAGKISDYREKFGIGDTIVCVVNLQSNPLA
        WS A + + +      F  ++   +PVEMNDTATDQQHLCRL I  GDSPVGNLGETKQSFGFGGTGKFSNAGK SDY EKFGIGDTIVC VNL+SNPLA
Subjt:  WSSAISRLKV----MVFQDQLFVSKPVEMNDTATDQQHLCRLDIFRGDSPVGNLGETKQSFGFGGTGKFSNAGKISDYREKFGIGDTIVCVVNLQSNPLA

Query:  SIGFSKNGKWLGTTIQFDVGPRGLGVVDSPLRKLQWESTFFPPVLL
        SIGFSKNGK LGT IQFD GPRGLGVVDSPL KL+WES  FP VLL
Subjt:  SIGFSKNGKWLGTTIQFDVGPRGLGVVDSPLRKLQWESTFFPPVLL

SwissProt top hitse value%identityAlignment
Q55CP6 Probable ATP-dependent RNA helicase ddx13.7e-0740Show/hide
Query:  LCRLDIFRGDSPVGNLGETKQSFGFGGTGKFSNAGKISDYREKFGIGDTIVCVVNLQSNPLASIGFSKNGKWLGTTIQFD
        LCR+  F       N+G  K S+G+GGTGK S+  K  DY + FG  D I C +N        IGF+KNG+  G    F+
Subjt:  LCRLDIFRGDSPVGNLGETKQSFGFGGTGKFSNAGKISDYREKFGIGDTIVCVVNLQSNPLASIGFSKNGKWLGTTIQFD

Q8VDM6 Heterogeneous nuclear ribonucleoprotein U-like protein 14.4e-0838.46Show/hide
Query:  DSPVGNLGETKQSFGFGGTGKFSNAGKISDYREKFGIGDTIVCVVNLQSNPLASIGFSKNGKWLGTTIQFDVGPRGLG
        DS    LGE   S+G+GGTGK S   +  +Y +KF   D I C  + +      + F+KNGKW+G  I F +    LG
Subjt:  DSPVGNLGETKQSFGFGGTGKFSNAGKISDYREKFGIGDTIVCVVNLQSNPLASIGFSKNGKWLGTTIQFDVGPRGLG

Q90WU3 ATP-dependent RNA helicase DDX12.9e-0736.84Show/hide
Query:  VSKPVEMNDTATDQQHLCRLDIFRGDSPVGNLGETKQSFGFGGTGKFSNAGKISDYREKFGIGDTIVCVVNLQSNPLASIGFSKNGKWLGTTIQF
        V+K     + +   Q LCR+      + + +LG  K  FGFGGTGK S+  +   Y E+F + DTI C +++       I FSKNGK LG   +F
Subjt:  VSKPVEMNDTATDQQHLCRLDIFRGDSPVGNLGETKQSFGFGGTGKFSNAGKISDYREKFGIGDTIVCVVNLQSNPLASIGFSKNGKWLGTTIQF

Q9BUJ2 Heterogeneous nuclear ribonucleoprotein U-like protein 14.4e-0838.46Show/hide
Query:  DSPVGNLGETKQSFGFGGTGKFSNAGKISDYREKFGIGDTIVCVVNLQSNPLASIGFSKNGKWLGTTIQFDVGPRGLG
        DS    LGE   S+G+GGTGK S   +  +Y +KF   D I C  + +      + F+KNGKW+G  I F +    LG
Subjt:  DSPVGNLGETKQSFGFGGTGKFSNAGKISDYREKFGIGDTIVCVVNLQSNPLASIGFSKNGKWLGTTIQFDVGPRGLG

Q9VNV3 ATP-dependent RNA helicase Ddx14.4e-0834.78Show/hide
Query:  TATDQQHLCRLDIFRGDSPVGNLGETKQSFGFGGTGKFSNAGKISDYREKFGIGDTIVCVVNLQSNPLASIGFSKNGKWLGTTIQFDVGPRGLGVVDSPL
        T TD + LCR+      + + +LG  +  FGFGGTGK SN  +  DY E FG  D I C+++L++     + F+KNG+ LG   +    P  L       
Subjt:  TATDQQHLCRLDIFRGDSPVGNLGETKQSFGFGGTGKFSNAGKISDYREKFGIGDTIVCVVNLQSNPLASIGFSKNGKWLGTTIQFDVGPRGLGVVDSPL

Query:  RKLQWESTFFPPVLL
             + TF+P V+L
Subjt:  RKLQWESTFFPPVLL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGAAACGAAGCGCGTATCTTTGCGATTTGCTGCGCAGTGGGGCGACGATCGTCAATGTTCGATTGGACGGAGGCGTTGCGACTGGCTTCCACGGTTCGCGACC
AGCGGCTTCCAAATCGAGCGGCGTGCAGCTGGGATTCTTATCGGCGAGAAGTTCGACGTGCTTGGGATGGTGGTCATCGGCGATTTCAAGATTGAAAGTGATGGTCTTCC
AGGATCAGCTCTTTGTGAGCAAGCCAGTTGAAATGAATGATACTGCTACAGATCAGCAACATCTTTGTCGTCTCGACATTTTTAGAGGGGACAGTCCAGTGGGAAATCTT
GGAGAAACTAAACAAAGTTTTGGATTTGGTGGCACAGGAAAGTTCTCGAATGCTGGAAAAATTTCTGATTACAGAGAAAAGTTTGGGATTGGTGATACTATTGTTTGTGT
TGTTAATCTTCAAAGCAACCCTCTGGCCTCAATTGGATTTTCCAAAAATGGCAAATGGTTGGGTACGACAATACAATTTGATGTTGGTCCAAGAGGCCTTGGAGTGGTGG
ATTCTCCATTGAGAAAGCTTCAATGGGAATCAACCTTTTTTCCTCCTGTATTGTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGATGAAACGAAGCGCGTATCTTTGCGATTTGCTGCGCAGTGGGGCGACGATCGTCAATGTTCGATTGGACGGAGGCGTTGCGACTGGCTTCCACGGTTCGCGACC
AGCGGCTTCCAAATCGAGCGGCGTGCAGCTGGGATTCTTATCGGCGAGAAGTTCGACGTGCTTGGGATGGTGGTCATCGGCGATTTCAAGATTGAAAGTGATGGTCTTCC
AGGATCAGCTCTTTGTGAGCAAGCCAGTTGAAATGAATGATACTGCTACAGATCAGCAACATCTTTGTCGTCTCGACATTTTTAGAGGGGACAGTCCAGTGGGAAATCTT
GGAGAAACTAAACAAAGTTTTGGATTTGGTGGCACAGGAAAGTTCTCGAATGCTGGAAAAATTTCTGATTACAGAGAAAAGTTTGGGATTGGTGATACTATTGTTTGTGT
TGTTAATCTTCAAAGCAACCCTCTGGCCTCAATTGGATTTTCCAAAAATGGCAAATGGTTGGGTACGACAATACAATTTGATGTTGGTCCAAGAGGCCTTGGAGTGGTGG
ATTCTCCATTGAGAAAGCTTCAATGGGAATCAACCTTTTTTCCTCCTGTATTGTTGTAA
Protein sequenceShow/hide protein sequence
MAMKRSAYLCDLLRSGATIVNVRLDGGVATGFHGSRPAASKSSGVQLGFLSARSSTCLGWWSSAISRLKVMVFQDQLFVSKPVEMNDTATDQQHLCRLDIFRGDSPVGNL
GETKQSFGFGGTGKFSNAGKISDYREKFGIGDTIVCVVNLQSNPLASIGFSKNGKWLGTTIQFDVGPRGLGVVDSPLRKLQWESTFFPPVLL