CuGenDBv2

Gene ID	Tan0010423
Organism	Trichosanthes anguina (Snake gourd v1)
Description	UPF0426 protein At1g28150, chloroplastic
Genome location	LG05:85175672..85178571
RNA-Seq Expression	Tan0010423
Synteny	Tan0010423
Gene Ontology terms	GO:0043086 - negative regulation of catalytic activity (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0030599 - pectinesterase activity (molecular function) GO:0046910 - pectinesterase inhibitor activity (molecular function)
InterPro domains	IPR040278 - UPF0426 protein

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004137400.1 UPF0426 protein At1g28150, chloroplastic [Cucumis sativus]

2.2e-50

83.85

Show/hide

Query:  MAGLLQHSSSTVSVLFGGMGKLKERNHNSILSSKKLVRGTASYLRLACNNSTNGISAFFFNPAEDPVIKEALKEPVAFAGGVFAGLLRLDLNEDPLKEWV
        MA LL HSSST SVLFG MGKLK RNHNSILSSKK VR  +S+ RL  NNSTNGISAFFFNP  DPV+KEALKEPVAFAGG+FAGLLRLDLNEDPLKEWV
Subjt:  MAGLLQHSSSTVSVLFGGMGKLKERNHNSILSSKKLVRGTASYLRLACNNSTNGISAFFFNPAEDPVIKEALKEPVAFAGGVFAGLLRLDLNEDPLKEWV

Query:  KKTVESAGITEEYDTQGTVQEDGPTEIEIE
        KKTVESAG+ EE DTQG+VQEDGPTEIEIE
Subjt:  KKTVESAGITEEYDTQGTVQEDGPTEIEIE

XP_008439829.1 PREDICTED: UPF0426 protein At1g28150, chloroplastic [Cucumis melo]

5.8e-51

83.85

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Query:  MAGLLQHSSSTVSVLFGGMGKLKERNHNSILSSKKLVRGTASYLRLACNNSTNGISAFFFNPAEDPVIKEALKEPVAFAGGVFAGLLRLDLNEDPLKEWV
        MA LL HSSST SVLFG MGKLK R+H+SILSSKK +R  +S+LRL  NNSTNGISAFFFNP EDPV+KEALKEPVAFAGG+FAGLLRLDLNEDPLKEWV
Subjt:  MAGLLQHSSSTVSVLFGGMGKLKERNHNSILSSKKLVRGTASYLRLACNNSTNGISAFFFNPAEDPVIKEALKEPVAFAGGVFAGLLRLDLNEDPLKEWV

Query:  KKTVESAGITEEYDTQGTVQEDGPTEIEIE
        KKTVESAG+TEE DTQG+VQEDGPTEIEIE
Subjt:  KKTVESAGITEEYDTQGTVQEDGPTEIEIE

XP_022924196.1 UPF0426 protein At1g28150, chloroplastic [Cucurbita moschata]

1.6e-48

80.77

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Query:  MAGLLQHSSSTVSVLFGGMGKLKERNHNSILSSKKLVRGTASYLRLACNNSTNGISAFFFNPAEDPVIKEALKEPVAFAGGVFAGLLRLDLNEDPLKEWV
        MAGLL HSSST SVL GGMGK +E N +SI S KK +R  A+ LRL C+NSTNGI AF FNP EDPV+KEALKEPVAFAGG+FAGLLRLDLNEDPLKEWV
Subjt:  MAGLLQHSSSTVSVLFGGMGKLKERNHNSILSSKKLVRGTASYLRLACNNSTNGISAFFFNPAEDPVIKEALKEPVAFAGGVFAGLLRLDLNEDPLKEWV

Query:  KKTVESAGITEEYDTQGTVQEDGPTEIEIE
        KKTVESAGITEE DTQG+VQEDGPTEIEIE
Subjt:  KKTVESAGITEEYDTQGTVQEDGPTEIEIE

XP_023518976.1 UPF0426 protein At1g28150, chloroplastic [Cucurbita pepo subsp. pepo]

7.9e-48

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Query:  MAGLLQHSSSTVSVLFGGMGKLKERNHNSILSSKKLVRGTASYLRLACNNSTNGISAFFFNPAEDPVIKEALKEPVAFAGGVFAGLLRLDLNEDPLKEWV
        MAGLL HSSST SVL GGMGK +E N + I S KK +R  A+ LRL C+NSTNGI AF FNP EDPV+KEALKEPVAFAGG+FAGLLRLDLNEDPLKEWV
Subjt:  MAGLLQHSSSTVSVLFGGMGKLKERNHNSILSSKKLVRGTASYLRLACNNSTNGISAFFFNPAEDPVIKEALKEPVAFAGGVFAGLLRLDLNEDPLKEWV

Query:  KKTVESAGITEEYDTQGTVQEDGPTEIEIE
        KKTVESAGITEE DTQG+VQEDGPTEIEIE
Subjt:  KKTVESAGITEEYDTQGTVQEDGPTEIEIE

XP_038893812.1 UPF0426 protein At1g28150, chloroplastic [Benincasa hispida]

3.4e-51

83.85

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Query:  MAGLLQHSSSTVSVLFGGMGKLKERNHNSILSSKKLVRGTASYLRLACNNSTNGISAFFFNPAEDPVIKEALKEPVAFAGGVFAGLLRLDLNEDPLKEWV
        MA LL HSSS  SVLFG MGKLK RNH+SILSS K VRG  ++LRL CNN TNGISAFFFNP EDPV+KEALKEPVAFAGG+FAGLLRLDLNEDPLKEWV
Subjt:  MAGLLQHSSSTVSVLFGGMGKLKERNHNSILSSKKLVRGTASYLRLACNNSTNGISAFFFNPAEDPVIKEALKEPVAFAGGVFAGLLRLDLNEDPLKEWV

Query:  KKTVESAGITEEYDTQGTVQEDGPTEIEIE
        KKTVESAG+TEE DTQG+VQEDGPTEIEIE
Subjt:  KKTVESAGITEEYDTQGTVQEDGPTEIEIE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LT92 Uncharacterized protein

1.1e-50

83.85

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Query:  MAGLLQHSSSTVSVLFGGMGKLKERNHNSILSSKKLVRGTASYLRLACNNSTNGISAFFFNPAEDPVIKEALKEPVAFAGGVFAGLLRLDLNEDPLKEWV
        MA LL HSSST SVLFG MGKLK RNHNSILSSKK VR  +S+ RL  NNSTNGISAFFFNP  DPV+KEALKEPVAFAGG+FAGLLRLDLNEDPLKEWV
Subjt:  MAGLLQHSSSTVSVLFGGMGKLKERNHNSILSSKKLVRGTASYLRLACNNSTNGISAFFFNPAEDPVIKEALKEPVAFAGGVFAGLLRLDLNEDPLKEWV

Query:  KKTVESAGITEEYDTQGTVQEDGPTEIEIE
        KKTVESAG+ EE DTQG+VQEDGPTEIEIE
Subjt:  KKTVESAGITEEYDTQGTVQEDGPTEIEIE

A0A1S3AZP7 UPF0426 protein At1g28150, chloroplastic

2.8e-51

83.85

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Query:  MAGLLQHSSSTVSVLFGGMGKLKERNHNSILSSKKLVRGTASYLRLACNNSTNGISAFFFNPAEDPVIKEALKEPVAFAGGVFAGLLRLDLNEDPLKEWV
        MA LL HSSST SVLFG MGKLK R+H+SILSSKK +R  +S+LRL  NNSTNGISAFFFNP EDPV+KEALKEPVAFAGG+FAGLLRLDLNEDPLKEWV
Subjt:  MAGLLQHSSSTVSVLFGGMGKLKERNHNSILSSKKLVRGTASYLRLACNNSTNGISAFFFNPAEDPVIKEALKEPVAFAGGVFAGLLRLDLNEDPLKEWV

Query:  KKTVESAGITEEYDTQGTVQEDGPTEIEIE
        KKTVESAG+TEE DTQG+VQEDGPTEIEIE
Subjt:  KKTVESAGITEEYDTQGTVQEDGPTEIEIE

A0A5D3BGH6 UPF0426 protein

2.8e-51

83.85

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Query:  MAGLLQHSSSTVSVLFGGMGKLKERNHNSILSSKKLVRGTASYLRLACNNSTNGISAFFFNPAEDPVIKEALKEPVAFAGGVFAGLLRLDLNEDPLKEWV
        MA LL HSSST SVLFG MGKLK R+H+SILSSKK +R  +S+LRL  NNSTNGISAFFFNP EDPV+KEALKEPVAFAGG+FAGLLRLDLNEDPLKEWV
Subjt:  MAGLLQHSSSTVSVLFGGMGKLKERNHNSILSSKKLVRGTASYLRLACNNSTNGISAFFFNPAEDPVIKEALKEPVAFAGGVFAGLLRLDLNEDPLKEWV

Query:  KKTVESAGITEEYDTQGTVQEDGPTEIEIE
        KKTVESAG+TEE DTQG+VQEDGPTEIEIE
Subjt:  KKTVESAGITEEYDTQGTVQEDGPTEIEIE

A0A6J1E8W6 UPF0426 protein At1g28150, chloroplastic

7.7e-49

80.77

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Query:  MAGLLQHSSSTVSVLFGGMGKLKERNHNSILSSKKLVRGTASYLRLACNNSTNGISAFFFNPAEDPVIKEALKEPVAFAGGVFAGLLRLDLNEDPLKEWV
        MAGLL HSSST SVL GGMGK +E N +SI S KK +R  A+ LRL C+NSTNGI AF FNP EDPV+KEALKEPVAFAGG+FAGLLRLDLNEDPLKEWV
Subjt:  MAGLLQHSSSTVSVLFGGMGKLKERNHNSILSSKKLVRGTASYLRLACNNSTNGISAFFFNPAEDPVIKEALKEPVAFAGGVFAGLLRLDLNEDPLKEWV

Query:  KKTVESAGITEEYDTQGTVQEDGPTEIEIE
        KKTVESAGITEE DTQG+VQEDGPTEIEIE
Subjt:  KKTVESAGITEEYDTQGTVQEDGPTEIEIE

A0A6J1KGM3 UPF0426 protein At1g28150, chloroplastic

1.9e-47

79.23

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Query:  MAGLLQHSSSTVSVLFGGMGKLKERNHNSILSSKKLVRGTASYLRLACNNSTNGISAFFFNPAEDPVIKEALKEPVAFAGGVFAGLLRLDLNEDPLKEWV
        MAGLL HSSST  VL GGMGK +E N +SI S KK +R  A+ LRL CNNSTN I AF F P EDPV+KEALKEPVAFAGG+FAGLLRLDLNEDPLKEWV
Subjt:  MAGLLQHSSSTVSVLFGGMGKLKERNHNSILSSKKLVRGTASYLRLACNNSTNGISAFFFNPAEDPVIKEALKEPVAFAGGVFAGLLRLDLNEDPLKEWV

Query:  KKTVESAGITEEYDTQGTVQEDGPTEIEIE
        KKTVESAGITEE DTQG+VQEDGPTEIEIE
Subjt:  KKTVESAGITEEYDTQGTVQEDGPTEIEIE

SwissProt top hits

e value

%identity

Alignment

P74786 UPF0426 protein ssl0294

5.4e-07

41.79

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Query:  PVIKEALKEPVAFAGGVFAGLLRLDLNEDPLKEWVKKTVESAGITE--EYDTQGTVQEDGPTEIEIE
        PV +E  ++P+AFAGG  +G+LRL L +DPLK+W++K     G+T+    D   T Q++ P  I+I+
Subjt:  PVIKEALKEPVAFAGGVFAGLLRLDLNEDPLKEWVKKTVESAGITE--EYDTQGTVQEDGPTEIEIE

Q8YQ06 UPF0426 protein asl4034

7.3e-04

43.24

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Query:  PVIKEALKEPVAFAGGVFAGLLRLDLNEDPLKEWVKK
        P+ K+ ++ P +F GG  +G+LRL+L +DP+K W+ K
Subjt:  PVIKEALKEPVAFAGGVFAGLLRLDLNEDPLKEWVKK

Q9FZ89 UPF0426 protein At1g28150, chloroplastic

4.7e-19

63.51

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Query:  FNPAEDPVIKEALKEPVAFAGGVFAGLLRLDLNEDPLKEWVKKTVESAGIT-EEYDTQGTV--QEDGPTEIEIE
        FN  ++P++ EALKEP+AF GG+FAGLLRLDLNE+PLK+WV +TVE++GIT EE D  G V   ED P +IEIE
Subjt:  FNPAEDPVIKEALKEPVAFAGGVFAGLLRLDLNEDPLKEWVKKTVESAGIT-EEYDTQGTV--QEDGPTEIEIE

Arabidopsis top hits

e value

%identity

Alignment

AT1G28150.1 unknown protein

3.3e-20

63.51

Show/hide

Query:  FNPAEDPVIKEALKEPVAFAGGVFAGLLRLDLNEDPLKEWVKKTVESAGIT-EEYDTQGTV--QEDGPTEIEIE
        FN  ++P++ EALKEP+AF GG+FAGLLRLDLNE+PLK+WV +TVE++GIT EE D  G V   ED P +IEIE
Subjt:  FNPAEDPVIKEALKEPVAFAGGVFAGLLRLDLNEDPLKEWVKKTVESAGIT-EEYDTQGTV--QEDGPTEIEIE

Sequences

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CDS sequence

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ATGGCAGGTCTTCTTCAACACTCCTCTTCAACTGTCAGCGTTCTGTTTGGAGGAATGGGGAAATTAAAGGAACGGAATCATAATTCCATTTTATCATCCAAGAAACTTGT
GCGTGGCACTGCCAGCTATCTTCGTCTCGCCTGCAATAATTCCACTAATGGCATCTCCGCATTTTTCTTCAATCCTGCAGAGGACCCCGTTATCAAAGAAGCTCTTAAGG
AGCCAGTTGCCTTCGCAGGAGGGGTATTTGCTGGACTTCTAAGGCTTGATTTGAACGAAGATCCATTAAAGGAATGGGTTAAGAAGACAGTGGAATCTGCTGGAATCACG
GAAGAATATGACACTCAAGGAACTGTACAAGAGGATGGCCCAACCGAGATCGAGATTGAATGA

mRNA sequence

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CCGGGATAAATGTTAGCTTTTGAGGCATGTGTCTGTTCTTGGAAATGTTTTGTCAATTGCGGGAAGAGAACAACAAACCATTGAAACCATTCCCTCAAATTGAACGCAAA
TATCTTCATCCTCTTCTTCCAGCTTTCATTCCCTCAGAACCAGGAGCATTAGCTTCATCAGAGATTATCCATGGCAGGTCTTCTTCAACACTCCTCTTCAACTGTCAGCG
TTCTGTTTGGAGGAATGGGGAAATTAAAGGAACGGAATCATAATTCCATTTTATCATCCAAGAAACTTGTGCGTGGCACTGCCAGCTATCTTCGTCTCGCCTGCAATAAT
TCCACTAATGGCATCTCCGCATTTTTCTTCAATCCTGCAGAGGACCCCGTTATCAAAGAAGCTCTTAAGGAGCCAGTTGCCTTCGCAGGAGGGGTATTTGCTGGACTTCT
AAGGCTTGATTTGAACGAAGATCCATTAAAGGAATGGGTTAAGAAGACAGTGGAATCTGCTGGAATCACGGAAGAATATGACACTCAAGGAACTGTACAAGAGGATGGCC
CAACCGAGATCGAGATTGAATGAGCCTATGAATGGACGTAATCTGGGACAGATCTTATTTATTCCAATAATATATGTAAATGGGAGAAGTGGGGATAAAATGATAATTGG
TTTGAAGTAAGATTTGCCAGATAAACTGTTACTATTACATTACTATGATTCCCTTCTCATGATTTAAAATAAGATGTGAAATTGAGTTGGGAGCTATTCCTTTCATAATC
CAAATGCTAGTACTTCATC

Protein sequence

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MAGLLQHSSSTVSVLFGGMGKLKERNHNSILSSKKLVRGTASYLRLACNNSTNGISAFFFNPAEDPVIKEALKEPVAFAGGVFAGLLRLDLNEDPLKEWVKKTVESAGIT
EEYDTQGTVQEDGPTEIEIE

Tan0010423 (gene) of Snake gourd v1 genome