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Tan0010440 (gene) of Snake gourd v1 genome

Gene IDTan0010440
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionzinc finger protein 6-like
Genome locationLG06:79633220..79633655
RNA-Seq ExpressionTan0010440
SyntenyTan0010440
Gene Ontology termsGO:0009736 - cytokinin-activated signaling pathway (biological process)
GO:0009740 - gibberellic acid mediated signaling pathway (biological process)
GO:0010090 - trichome morphogenesis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily
IPR044299 - Zinc finger protein GIS3/ZFP5/ZFP6


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593997.1 Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. sororia]1.5e-4677.61Show/hide
Query:  MKLFGFSVTASTDHDRANLGAPFANHNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNKPPSFFTSS-PQSAAVIWSRSGGAPPPEYK
        MKLFGFSVTAS   D+A LGAP AN NKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRF+PNK P FFT++ P SA VIWSRSGGAPP    
Subjt:  MKLFGFSVTASTDHDRANLGAPFANHNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNKPPSFFTSS-PQSAAVIWSRSGGAPPPEYK

Query:  MTPEAPPSVASGEVNGENGVDLHLSLAPSSRIFC
            +      GEVNGENGVDLHLSLAPSSRIFC
Subjt:  MTPEAPPSVASGEVNGENGVDLHLSLAPSSRIFC

KAG7013666.1 Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-3467.16Show/hide
Query:  MKLFGFSVTASTDHDRANLGAPFANHNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNKPPSFFTSSPQSAAVIWSRSGGAPPPEYKM
        MKLFG+SVTAS +    +LGAP ANH    KRF+CQFCGREFANSQALGGHQNAHKRERQLAKQL      P +FFT +P  +A      G +PPP Y+M
Subjt:  MKLFGFSVTASTDHDRANLGAPFANHNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNKPPSFFTSSPQSAAVIWSRSGGAPPPEYKM

Query:  TPEAPPSVASGEVNGE-NGVDLHLSLAPSS-RIF
          EAPPSV  GE+NGE NGVDLHLSLAPSS RIF
Subjt:  TPEAPPSVASGEVNGE-NGVDLHLSLAPSS-RIF

XP_022930487.1 zinc finger protein 6-like [Cucurbita moschata]1.5e-4677.61Show/hide
Query:  MKLFGFSVTASTDHDRANLGAPFANHNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNKPPSFFTSS-PQSAAVIWSRSGGAPPPEYK
        MKLFGFSVTAS   D+A +GAP AN NKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRF+PNK P FFTS+ P SA VIWSRSGGAPP    
Subjt:  MKLFGFSVTASTDHDRANLGAPFANHNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNKPPSFFTSS-PQSAAVIWSRSGGAPPPEYK

Query:  MTPEAPPSVASGEVNGENGVDLHLSLAPSSRIFC
               +   GEVNGENGVDLHLSLAPSSRIFC
Subjt:  MTPEAPPSVASGEVNGENGVDLHLSLAPSSRIFC

XP_023514440.1 zinc finger protein 6-like [Cucurbita pepo subsp. pepo]1.2e-4677.61Show/hide
Query:  MKLFGFSVTASTDHDRANLGAPFANHNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNKPPSFFTSS-PQSAAVIWSRSGGAPPPEYK
        MKLFGFSVTAS   D+A +GAP AN NKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRF+PNK P FFTS+ P SA VIWSRSGGAPP    
Subjt:  MKLFGFSVTASTDHDRANLGAPFANHNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNKPPSFFTSS-PQSAAVIWSRSGGAPPPEYK

Query:  MTPEAPPSVASGEVNGENGVDLHLSLAPSSRIFC
            +      GEVNGENGVDLHLSLAPSSRIFC
Subjt:  MTPEAPPSVASGEVNGENGVDLHLSLAPSSRIFC

XP_023548316.1 zinc finger protein 6-like [Cucurbita pepo subsp. pepo]3.9e-3467.16Show/hide
Query:  MKLFGFSVTASTDHDRANLGAPFANHNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNKPPSFFTSSPQSAAVIWSRSGGAPPPEYKM
        MKLFG+SVTAS +    +LGAP ANH    KRF+CQFCGREFANSQALGGHQNAHKRERQLAKQL      P +FFT +P  +A     +G +PPP Y+M
Subjt:  MKLFGFSVTASTDHDRANLGAPFANHNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNKPPSFFTSSPQSAAVIWSRSGGAPPPEYKM

Query:  TPEAPPSVASGEVNGE-NGVDLHLSLAPSS-RIF
          EAPPSV  GE+NGE NGVDLHLSLAPSS RIF
Subjt:  TPEAPPSVASGEVNGE-NGVDLHLSLAPSS-RIF

TrEMBL top hitse value%identityAlignment
A0A0A0KI02 C2H2-type domain-containing protein5.5e-3468.09Show/hide
Query:  MKLFGFSVTAST--DHDRANLGAPFANHNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQ-LRFEPNK-PPSFFTSSPQSAAV-IWSRSGGAPP
        MKLFGFSVTAST       NLGAP  NHN   KRFECQFCGREFANSQALGGHQNAHKRERQLAKQ L  +P K   +F  S+P S+ V IWS +G APP
Subjt:  MKLFGFSVTAST--DHDRANLGAPFANHNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQ-LRFEPNK-PPSFFTSSPQSAAV-IWSRSGGAPP

Query:  PEYKMTPEAPPS-VASGEVNGE-NGVDLHLSLAPSS-RIFC
        P+Y +  +A P+ V  GEVN E NGVDLHLSLAPSS RIFC
Subjt:  PEYKMTPEAPPS-VASGEVNGE-NGVDLHLSLAPSS-RIFC

A0A6J1EQN3 zinc finger protein 6-like7.4e-4777.61Show/hide
Query:  MKLFGFSVTASTDHDRANLGAPFANHNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNKPPSFFTSS-PQSAAVIWSRSGGAPPPEYK
        MKLFGFSVTAS   D+A +GAP AN NKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRF+PNK P FFTS+ P SA VIWSRSGGAPP    
Subjt:  MKLFGFSVTASTDHDRANLGAPFANHNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNKPPSFFTSS-PQSAAVIWSRSGGAPPPEYK

Query:  MTPEAPPSVASGEVNGENGVDLHLSLAPSSRIFC
               +   GEVNGENGVDLHLSLAPSSRIFC
Subjt:  MTPEAPPSVASGEVNGENGVDLHLSLAPSSRIFC

A0A6J1H7Y0 zinc finger protein 6-like7.1e-3466.42Show/hide
Query:  MKLFGFSVTASTDHDRANLGAPFANHNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNKPPSFFTSSPQSAAVIWSRSGGAPPPEYKM
        MKLFG+SV AS +    +LGAP ANH    KRF+CQFCGREFANSQALGGHQNAHKRERQLAKQL      P +FFT +P  +A     +G +PPP Y+M
Subjt:  MKLFGFSVTASTDHDRANLGAPFANHNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNKPPSFFTSSPQSAAVIWSRSGGAPPPEYKM

Query:  TPEAPPSVASGEVNGE-NGVDLHLSLAPSS-RIF
          EAPPSV  GE+NGE NGVDLHLSLAPSS RIF
Subjt:  TPEAPPSVASGEVNGE-NGVDLHLSLAPSS-RIF

A0A6J1KF91 zinc finger protein 6-like7.4e-4777.61Show/hide
Query:  MKLFGFSVTASTDHDRANLGAPFANHNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNKPPSFFTSS-PQSAAVIWSRSGGAPPPEYK
        MKLFGFSVTAS   D+A +GAP AN NKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRF+PNK P FFTS+ P SA VIWSRSGGAPP    
Subjt:  MKLFGFSVTASTDHDRANLGAPFANHNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNKPPSFFTSS-PQSAAVIWSRSGGAPPPEYK

Query:  MTPEAPPSVASGEVNGENGVDLHLSLAPSSRIFC
               +   GEVNGENGVDLHLSLAPSSRIFC
Subjt:  MTPEAPPSVASGEVNGENGVDLHLSLAPSSRIFC

A0A6J1KZQ7 zinc finger protein 6-like4.2e-3467.16Show/hide
Query:  MKLFGFSVTASTDHDRANLGAPFANHNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNKPPSFFTSSPQSAAVIWSRSGGAPPPEYKM
        MKLFG+SVTAS +    +LGAP  NH    KRFECQFCGREFANSQALGGHQNAHKRERQLAKQL      P +FFT +P  +A     +G +PPP Y+M
Subjt:  MKLFGFSVTASTDHDRANLGAPFANHNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNKPPSFFTSSPQSAAVIWSRSGGAPPPEYKM

Query:  TPEAPPSVASGEVNGE-NGVDLHLSLAPSS-RIF
          EAPPSV  GE+NGE NGVDLHLSLAPSS RIF
Subjt:  TPEAPPSVASGEVNGE-NGVDLHLSLAPSS-RIF

SwissProt top hitse value%identityAlignment
Q39264 Zinc finger protein 52.0e-0942.11Show/hide
Query:  MKLFGFSVTASTDHDRANLGAPFANHNKDD-----KRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNK
        +KLFGF + + +           ++          KR ECQ+CG+EFANSQALGGHQNAHK+ER   K+L+ +  +
Subjt:  MKLFGFSVTASTDHDRANLGAPFANHNKDD-----KRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNK

Q39265 Zinc finger protein 63.3e-1235.11Show/hide
Query:  MKLFGFSVTASTD-HDRANLGAPFANHNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNKP-PSFFTSSPQSAAVIWSRSGGAPPPEY
        +KLFG ++  +T   ++++   P +    + +++ECQ+C REFANSQALGGHQNAHK+ERQL K+ +    +  P      P +  ++   S  AP P  
Subjt:  MKLFGFSVTASTD-HDRANLGAPFANHNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNKP-PSFFTSSPQSAAVIWSRSGGAPPPEY

Query:  KMTPEAPPSVASGEVNGENGVDLHLSLAPSS
           P  PP               H+ L+PSS
Subjt:  KMTPEAPPSVASGEVNGENGVDLHLSLAPSS

Q84WI0 Zinc finger protein GIS2.9e-0843.9Show/hide
Query:  NHNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQ-----LRFEPNKPPSF-----FTSSPQSAAVIWSRSGGAPPP
        N    ++RFEC +C R F  SQALGGHQNAHKRERQLAK+          N P S+     +T+ P +AA  +      P P
Subjt:  NHNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQ-----LRFEPNKPPSF-----FTSSPQSAAVIWSRSGGAPPP

Q9C9H1 Zinc finger protein GIS35.9e-0941.77Show/hide
Query:  DKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNKPPSFFTSSPQSAAVIWSR---SGGAPPPEYKMTPEAP
        ++++ECQ+C REF NSQALGGHQNAHK+ERQ  K+ + +  +  +   S+  SA+        S  APPP    +   P
Subjt:  DKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNKPPSFFTSSPQSAAVIWSR---SGGAPPPEYKMTPEAP

Q9FG05 Zinc finger protein GIS22.0e-0940.91Show/hide
Query:  MKLFGFSVTASTDH----DRANLGAPFANHNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNKPPSFFTSSPQSAA
        ++LFGF   AS +     D  N        +  +KRF+C +C R F  SQALGGHQNAHKRERQ  K+     N    F       AA
Subjt:  MKLFGFSVTASTDH----DRANLGAPFANHNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNKPPSFFTSSPQSAA

Arabidopsis top hitse value%identityAlignment
AT1G10480.1 zinc finger protein 51.4e-1042.11Show/hide
Query:  MKLFGFSVTASTDHDRANLGAPFANHNKDD-----KRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNK
        +KLFGF + + +           ++          KR ECQ+CG+EFANSQALGGHQNAHK+ER   K+L+ +  +
Subjt:  MKLFGFSVTASTDHDRANLGAPFANHNKDD-----KRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNK

AT1G67030.1 zinc finger protein 62.4e-1335.11Show/hide
Query:  MKLFGFSVTASTD-HDRANLGAPFANHNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNKP-PSFFTSSPQSAAVIWSRSGGAPPPEY
        +KLFG ++  +T   ++++   P +    + +++ECQ+C REFANSQALGGHQNAHK+ERQL K+ +    +  P      P +  ++   S  AP P  
Subjt:  MKLFGFSVTASTD-HDRANLGAPFANHNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNKP-PSFFTSSPQSAAVIWSRSGGAPPPEY

Query:  KMTPEAPPSVASGEVNGENGVDLHLSLAPSS
           P  PP               H+ L+PSS
Subjt:  KMTPEAPPSVASGEVNGENGVDLHLSLAPSS

AT1G68360.1 C2H2 and C2HC zinc fingers superfamily protein4.2e-1041.77Show/hide
Query:  DKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNKPPSFFTSSPQSAAVIWSR---SGGAPPPEYKMTPEAP
        ++++ECQ+C REF NSQALGGHQNAHK+ERQ  K+ + +  +  +   S+  SA+        S  APPP    +   P
Subjt:  DKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNKPPSFFTSSPQSAAVIWSR---SGGAPPPEYKMTPEAP

AT3G58070.1 C2H2 and C2HC zinc fingers superfamily protein2.1e-0943.9Show/hide
Query:  NHNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQ-----LRFEPNKPPSF-----FTSSPQSAAVIWSRSGGAPPP
        N    ++RFEC +C R F  SQALGGHQNAHKRERQLAK+          N P S+     +T+ P +AA  +      P P
Subjt:  NHNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQ-----LRFEPNKPPSF-----FTSSPQSAAVIWSRSGGAPPP

AT5G06650.1 C2H2 and C2HC zinc fingers superfamily protein1.4e-1040.91Show/hide
Query:  MKLFGFSVTASTDH----DRANLGAPFANHNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNKPPSFFTSSPQSAA
        ++LFGF   AS +     D  N        +  +KRF+C +C R F  SQALGGHQNAHKRERQ  K+     N    F       AA
Subjt:  MKLFGFSVTASTDH----DRANLGAPFANHNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNKPPSFFTSSPQSAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTGTTTGGTTTTTCAGTGACGGCTAGTACTGATCACGATCGAGCCAACTTGGGTGCGCCATTTGCGAACCACAACAAGGACGACAAGAGATTCGAGTGCCAATT
CTGCGGCCGTGAGTTCGCTAATTCTCAAGCCCTCGGCGGCCACCAGAACGCCCACAAGCGCGAGCGTCAGCTCGCCAAACAACTCCGTTTCGAACCCAATAAACCCCCTT
CTTTTTTCACTTCCTCGCCGCAATCCGCCGCCGTCATCTGGTCCAGATCCGGTGGAGCTCCGCCACCAGAATATAAAATGACGCCGGAAGCGCCGCCGTCGGTTGCCAGC
GGTGAAGTGAATGGGGAAAATGGCGTTGATCTCCACCTCAGTCTCGCACCTTCCTCCAGGATCTTCTGTTAA
mRNA sequenceShow/hide mRNA sequence
GGCCATTTGAAAAAATATTAAATTAAAGTGAGATATGAAGCTGTTTGGTTTTTCAGTGACGGCTAGTACTGATCACGATCGAGCCAACTTGGGTGCGCCATTTGCGAACC
ACAACAAGGACGACAAGAGATTCGAGTGCCAATTCTGCGGCCGTGAGTTCGCTAATTCTCAAGCCCTCGGCGGCCACCAGAACGCCCACAAGCGCGAGCGTCAGCTCGCC
AAACAACTCCGTTTCGAACCCAATAAACCCCCTTCTTTTTTCACTTCCTCGCCGCAATCCGCCGCCGTCATCTGGTCCAGATCCGGTGGAGCTCCGCCACCAGAATATAA
AATGACGCCGGAAGCGCCGCCGTCGGTTGCCAGCGGTGAAGTGAATGGGGAAAATGGCGTTGATCTCCACCTCAGTCTCGCACCTTCCTCCAGGATCTTCTGTTAA
Protein sequenceShow/hide protein sequence
MKLFGFSVTASTDHDRANLGAPFANHNKDDKRFECQFCGREFANSQALGGHQNAHKRERQLAKQLRFEPNKPPSFFTSSPQSAAVIWSRSGGAPPPEYKMTPEAPPSVAS
GEVNGENGVDLHLSLAPSSRIFC