; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0010441 (gene) of Snake gourd v1 genome

Gene IDTan0010441
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationLG04:72345643..72347854
RNA-Seq ExpressionTan0010441
SyntenyTan0010441
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038887220.1 uncharacterized protein LOC120077410 [Benincasa hispida]1.4e-2543.8Show/hide
Query:  AARAFRTVEFNSYWEQLRLFRNGAVTQYLEEVGFDRWARSHQIERRYDNMTNNTTESFNSLTKDARLLPITSLLEFVRNHLQQW----------------
        A R +R +EF  +W Q+  ++NG++ +YLE+ G  +WAR +Q E RYDNMT+N+ E FN+ TK+ R+LPIT LLE+ R  LQ W                
Subjt:  AARAFRTVEFNSYWEQLRLFRNGAVTQYLEEVGFDRWARSHQIERRYDNMTNNTTESFNSLTKDARLLPITSLLEFVRNHLQQW----------------

Query:  -----KMATDCDRARRYQVEPIDCYRFNVRDGRLDDI
              M  +C+++R+ +V PIDCYRF+V+DGRLD I
Subjt:  -----KMATDCDRARRYQVEPIDCYRFNVRDGRLDDI

XP_038891686.1 uncharacterized protein LOC120081080 [Benincasa hispida]2.7e-2949.64Show/hide
Query:  AARAFRTVEFNSYWEQLRLFRNGAVTQYLEEVGFDRWARSHQIERRYDNMTNNTTESFNSLTKDARLLPITSLLEFVRNHLQQW----------------
        AAR FR  EF ++W+QLR F+NGAV +YL+++G +RW   +Q E+RYDNMT+N+ E FNSLTK+ R LPI  LLE VR  +Q W                
Subjt:  AARAFRTVEFNSYWEQLRLFRNGAVTQYLEEVGFDRWARSHQIERRYDNMTNNTTESFNSLTKDARLLPITSLLEFVRNHLQQW----------------

Query:  -----KMATDCDRARRYQVEPIDCYRFNVRDGRLDDI
             ++ T+CD+ RRY+VE IDCYR +VRD RLD I
Subjt:  -----KMATDCDRARRYQVEPIDCYRFNVRDGRLDDI

XP_038892626.1 uncharacterized protein LOC120081651 [Benincasa hispida]8.3e-2341.61Show/hide
Query:  AARAFRTVEFNSYWEQLRLFRNGAVTQYLEEVGFDRWARSHQIERRYDNMTNNTTESFNSLTKDARLLPITSLLEFVRNHLQQWK---------------
        A RA+R  EF  +W Q+  ++NG++  YLE+     WAR +Q   RYDNMT+N ++ FN++TK+ R+LP TSLLE++R  LQ W                
Subjt:  AARAFRTVEFNSYWEQLRLFRNGAVTQYLEEVGFDRWARSHQIERRYDNMTNNTTESFNSLTKDARLLPITSLLEFVRNHLQQWK---------------

Query:  ------MATDCDRARRYQVEPIDCYRFNVRDGRLDDI
              M+ +C++ARR +V PID YRF+V+DG +D I
Subjt:  ------MATDCDRARRYQVEPIDCYRFNVRDGRLDDI

XP_038895865.1 uncharacterized protein LOC120084035 [Benincasa hispida]1.4e-2552.54Show/hide
Query:  FRNGAVTQYLEEVGFDRWARSHQIERRYDNMTNNTTESFNSLTKDARLLPITSLLEFVRNHLQQW---------------------KMATDCDRARRYQV
        FR+GAVT+YLE++   RWAR +QIERRYDNMT+N+ E FNSLTK+ RL+PI   +E VR  LQ W                     ++A++ D+ RRYQV
Subjt:  FRNGAVTQYLEEVGFDRWARSHQIERRYDNMTNNTTESFNSLTKDARLLPITSLLEFVRNHLQQW---------------------KMATDCDRARRYQV

Query:  EPIDCYRFNVRDGRLDDI
        EPIDCY+ +VRD RLDDI
Subjt:  EPIDCYRFNVRDGRLDDI

XP_038902409.1 uncharacterized protein LOC120089049 [Benincasa hispida]8.8e-3353.28Show/hide
Query:  AARAFRTVEFNSYWEQLRLFRNGAVTQYLEEVGFDRWARSHQIERRYDNMTNNTTESFNSLTKDARLLPITSLLEFVRNHLQQW----------------
        AARAFR  EF ++W+QLR  RNGAV++YLE++G ++W R +Q ERRYDNMT+N+ E FNSLTK+ R LPI  LLE VR  +Q W                
Subjt:  AARAFRTVEFNSYWEQLRLFRNGAVTQYLEEVGFDRWARSHQIERRYDNMTNNTTESFNSLTKDARLLPITSLLEFVRNHLQQW----------------

Query:  -----KMATDCDRARRYQVEPIDCYRFNVRDGRLDDI
             ++AT+CD+ RRY+VEPIDCYR +VRD RLD I
Subjt:  -----KMATDCDRARRYQVEPIDCYRFNVRDGRLDDI

TrEMBL top hitse value%identityAlignment
A0A6J1CWE6 protein FAR-RED ELONGATED HYPOCOTYL 3-like2.4e-2039.26Show/hide
Query:  AARAFRTVEFNSYWEQLRLFRNGAVTQYLEEVGFDRWARSHQIERRYDNMTNNTTESFNSLTKDARLLPITSLLEFVRNHLQQW----------------
        A  A+R  +F  YW Q+    +G + +YL+E+G +RWAR +Q+ RRY+NMT N+ ES N+L + AR LPIT ++EF+R+ LQ+W                
Subjt:  AARAFRTVEFNSYWEQLRLFRNGAVTQYLEEVGFDRWARSHQIERRYDNMTNNTTESFNSLTKDARLLPITSLLEFVRNHLQQW----------------

Query:  -----KMATDCDRARRYQVEPIDCYRFNVRDGRLD
             ++A   +++RRY V+P+D   F V DG LD
Subjt:  -----KMATDCDRARRYQVEPIDCYRFNVRDGRLD

A0A6J1DBW0 uncharacterized protein LOC1110196015.4e-2038.52Show/hide
Query:  AARAFRTVEFNSYWEQLRLFRNGAVTQYLEEVGFDRWARSHQIERRYDNMTNNTTESFNSLTKDARLLPITSLLEFVRNHLQQW----------------
        AA A+R  +F  YW Q+    +G++ +YL+E+G +RWAR +Q+ RRY+NMT N+  S N+  ++AR LPIT ++EF+   LQ+W                
Subjt:  AARAFRTVEFNSYWEQLRLFRNGAVTQYLEEVGFDRWARSHQIERRYDNMTNNTTESFNSLTKDARLLPITSLLEFVRNHLQQW----------------

Query:  -----KMATDCDRARRYQVEPIDCYRFNVRDGRLD
             ++A   +++RRY V+PID   F+V+DG LD
Subjt:  -----KMATDCDRARRYQVEPIDCYRFNVRDGRLD

A0A6J1DL08 uncharacterized protein LOC1110220713.2e-2038.64Show/hide
Query:  AARAFRTVEFNSYWEQLRLFRNGAVTQYLEEVGFDRWARSHQIERRYDNMTNNTTESFNSLTKDARLLPITSLLEFVRNHLQQW----------------
        AA A+R  +F  YW Q+    +G++ +YL+E+G +RWAR +Q+ RRY+N T N+ ES N+L ++AR LPIT ++EF+R  LQ+W                
Subjt:  AARAFRTVEFNSYWEQLRLFRNGAVTQYLEEVGFDRWARSHQIERRYDNMTNNTTESFNSLTKDARLLPITSLLEFVRNHLQQW----------------

Query:  -----KMATDCDRARRYQVEPIDCYRFNVRDG
             ++A   +++RRY V+P+D   F+V DG
Subjt:  -----KMATDCDRARRYQVEPIDCYRFNVRDG

A0A6J1DQ99 uncharacterized protein LOC1110232352.4e-2038.52Show/hide
Query:  AARAFRTVEFNSYWEQLRLFRNGAVTQYLEEVGFDRWARSHQIERRYDNMTNNTTESFNSLTKDARLLPITSLLEFVRNHLQQW----------------
        AA A+R  +F  YW Q+    +G++ +YL+E+G +RWAR +Q+ RRY+NMT N+ ES N+L ++AR LPIT ++EF+ + LQ+W                
Subjt:  AARAFRTVEFNSYWEQLRLFRNGAVTQYLEEVGFDRWARSHQIERRYDNMTNNTTESFNSLTKDARLLPITSLLEFVRNHLQQW----------------

Query:  -----KMATDCDRARRYQVEPIDCYRFNVRDGRLD
             ++A   +++RRY V+P+D   F+V D  LD
Subjt:  -----KMATDCDRARRYQVEPIDCYRFNVRDGRLD

A0A6J1E2V3 uncharacterized protein LOC1110255303.2e-2039.26Show/hide
Query:  AARAFRTVEFNSYWEQLRLFRNGAVTQYLEEVGFDRWARSHQIERRYDNMTNNTTESFNSLTKDARLLPITSLLEFVRNHLQQW----------------
        AA A+R  +F  YW Q+    +G++ +YL+E+G +RWAR +Q+ RRY+NMT N+ ES N L ++A  LPIT ++EF+R+ LQ+W                
Subjt:  AARAFRTVEFNSYWEQLRLFRNGAVTQYLEEVGFDRWARSHQIERRYDNMTNNTTESFNSLTKDARLLPITSLLEFVRNHLQQW----------------

Query:  -----KMATDCDRARRYQVEPIDCYRFNVRDGRLD
             ++A   +++RRY V+P+D   F+V DG LD
Subjt:  -----KMATDCDRARRYQVEPIDCYRFNVRDGRLD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGTTCAACCAACTAACTTAGACGATATCAAAGTAATATTGTATTTCAATTCGTTGTTTGAATATGTTTTCATGGCGCTGGGACCTTGTGTAAGAGGGTTCGCACA
TTGTGGTAATGTCGTAGTAGCAGCTCGAGCATTCAGGACGGTAGAATTTAATTCTTATTGGGAACAACTGCGTCTCTTTCGCAATGGAGCAGTGACCCAATATTTGGAGG
AGGTTGGGTTCGACAGATGGGCGAGATCCCATCAAATAGAGCGACGGTACGACAATATGACCAACAACACGACAGAGTCTTTCAATTCTTTAACAAAAGATGCTAGACTC
TTGCCTATCACATCCTTACTTGAGTTTGTAAGGAACCATCTGCAACAATGGAAGATGGCCACAGACTGTGATAGAGCCAGACGATATCAAGTAGAGCCCATCGACTGTTA
CCGTTTTAACGTACGAGATGGTCGGTTAGATGACATTTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGTTCAACCAACTAACTTAGACGATATCAAAGTAATATTGTATTTCAATTCGTTGTTTGAATATGTTTTCATGGCGCTGGGACCTTGTGTAAGAGGGTTCGCACA
TTGTGGTAATGTCGTAGTAGCAGCTCGAGCATTCAGGACGGTAGAATTTAATTCTTATTGGGAACAACTGCGTCTCTTTCGCAATGGAGCAGTGACCCAATATTTGGAGG
AGGTTGGGTTCGACAGATGGGCGAGATCCCATCAAATAGAGCGACGGTACGACAATATGACCAACAACACGACAGAGTCTTTCAATTCTTTAACAAAAGATGCTAGACTC
TTGCCTATCACATCCTTACTTGAGTTTGTAAGGAACCATCTGCAACAATGGAAGATGGCCACAGACTGTGATAGAGCCAGACGATATCAAGTAGAGCCCATCGACTGTTA
CCGTTTTAACGTACGAGATGGTCGGTTAGATGACATTTGTTGA
Protein sequenceShow/hide protein sequence
MVVQPTNLDDIKVILYFNSLFEYVFMALGPCVRGFAHCGNVVVAARAFRTVEFNSYWEQLRLFRNGAVTQYLEEVGFDRWARSHQIERRYDNMTNNTTESFNSLTKDARL
LPITSLLEFVRNHLQQWKMATDCDRARRYQVEPIDCYRFNVRDGRLDDIC