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Tan0010452 (gene) of Snake gourd v1 genome

Gene IDTan0010452
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRetrotransposon-derived protein PEG10, putative
Genome locationLG01:104375478..104376210
RNA-Seq ExpressionTan0010452
SyntenyTan0010452
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038606.1 putative Retrotransposon-derived protein PEG10 [Cucumis melo var. makuwa]1.6e-3082.52Show/hide
Query:  MERVEAESRDEAMR-SKTAFRCAKAAFLLSSLKSSQNRNLRAAVDEQAKEKEKLRKAVGDLKIELAMERLRNKRIKLCGLMEFILQLLLVISLSSFFLFI
        ME VEAES+DEAMR SKTA RCAKAAFLLSSLKSSQNR LRA   EQAKE++ LRK VGDLKI+LA ERLRNKRIKLCGLMEF+LQLLLVISLSS  LF+
Subjt:  MERVEAESRDEAMR-SKTAFRCAKAAFLLSSLKSSQNRNLRAAVDEQAKEKEKLRKAVGDLKIELAMERLRNKRIKLCGLMEFILQLLLVISLSSFFLFI

Query:  AFK
        AFK
Subjt:  AFK

KAG6608080.1 hypothetical protein SDJN03_01422, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2986.52Show/hide
Query:  MERVEAESRDEAMRSKTAFRCAKAAFLLSSLKSSQNRNLRAAVDEQAKEKEKLRKAVGDLKIELAMERLRNKRIKLCGLMEFILQLLLV
        ME VEAESRDEAMRSKTAFRCAKAAFL+SS KS QNRNLRA+VDE+AKEKE+LRK VGDLKIELAMER RN+RIKLCGLMEF+LQLLL+
Subjt:  MERVEAESRDEAMRSKTAFRCAKAAFLLSSLKSSQNRNLRAAVDEQAKEKEKLRKAVGDLKIELAMERLRNKRIKLCGLMEFILQLLLV

KAG7031715.1 hypothetical protein SDJN02_05756, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-3689.32Show/hide
Query:  MERVEAESRDEAMRSKTAFRCAKAAFLLSSLKSSQNRNLRAAVDEQAKEKEKLRKAVGDLKIELAMERLRNKRIKLCGLMEFILQLLLVISLSSFFLFIA
        ME VEAESRDEAMRSKTAFRCAKAAFL+SS KS QNRNLRA+VDE+AKEKE+LRK VGDLKIELAMER RN+RIKLCGLMEF+LQLLLVISLSSFFLFIA
Subjt:  MERVEAESRDEAMRSKTAFRCAKAAFLLSSLKSSQNRNLRAAVDEQAKEKEKLRKAVGDLKIELAMERLRNKRIKLCGLMEFILQLLLVISLSSFFLFIA

Query:  FKS
        FKS
Subjt:  FKS

XP_022138206.1 uncharacterized protein LOC111009432 [Momordica charantia]3.4e-3383.5Show/hide
Query:  MERVEAESRDEAMRSKTAFRCAKAAFLLSSLKSSQNRNLRAAVDEQAKEKEKLRKAVGDLKIELAMERLRNKRIKLCGLMEFILQLLLVISLSSFFLFIA
        ME+VEAESRDEAMRS+TAFRCAKAAF+LSSLKSSQN  LRA V E  KEKEKLRK +GDLK+ELA ERLRNKRIKLCGLMEF+LQ+LLVI+LSSFF FIA
Subjt:  MERVEAESRDEAMRSKTAFRCAKAAFLLSSLKSSQNRNLRAAVDEQAKEKEKLRKAVGDLKIELAMERLRNKRIKLCGLMEFILQLLLVISLSSFFLFIA

Query:  FKS
        FKS
Subjt:  FKS

XP_022940284.1 uncharacterized protein LOC111445952 [Cucurbita moschata]2.9e-3791.26Show/hide
Query:  MERVEAESRDEAMRSKTAFRCAKAAFLLSSLKSSQNRNLRAAVDEQAKEKEKLRKAVGDLKIELAMERLRNKRIKLCGLMEFILQLLLVISLSSFFLFIA
        ME VEAESRDEAMRSKTAFRCAKAAFL+SS KS QNRNLRA+VDEQAKEKE+LRK VGDLKIELAMER RNKRIKLCGLMEF+LQLLLVISLSSFFLFIA
Subjt:  MERVEAESRDEAMRSKTAFRCAKAAFLLSSLKSSQNRNLRAAVDEQAKEKEKLRKAVGDLKIELAMERLRNKRIKLCGLMEFILQLLLVISLSSFFLFIA

Query:  FKS
        FKS
Subjt:  FKS

TrEMBL top hitse value%identityAlignment
A0A0A0LJY1 Uncharacterized protein7.1e-2980.39Show/hide
Query:  MERVEAESRDEAMR-SKTAFRCAKAAFLLSSLKSSQNRNLRAAVDEQAKEKEKLRKAVGDLKIELAMERLRNKRIKLCGLMEFILQLLLVISLSSFFLFI
        ME VEAE+++EAMR SKTA RCAKAAFLLSSLKSSQNR LRA V EQAKEK+ L K VGDLKI+LA ER+RNKRIKLCGLMEF+LQLLLV+SLSS FLF 
Subjt:  MERVEAESRDEAMR-SKTAFRCAKAAFLLSSLKSSQNRNLRAAVDEQAKEKEKLRKAVGDLKIELAMERLRNKRIKLCGLMEFILQLLLVISLSSFFLFI

Query:  AF
        AF
Subjt:  AF

A0A5D3E7E0 Putative Retrotransposon-derived protein PEG107.6e-3182.52Show/hide
Query:  MERVEAESRDEAMR-SKTAFRCAKAAFLLSSLKSSQNRNLRAAVDEQAKEKEKLRKAVGDLKIELAMERLRNKRIKLCGLMEFILQLLLVISLSSFFLFI
        ME VEAES+DEAMR SKTA RCAKAAFLLSSLKSSQNR LRA   EQAKE++ LRK VGDLKI+LA ERLRNKRIKLCGLMEF+LQLLLVISLSS  LF+
Subjt:  MERVEAESRDEAMR-SKTAFRCAKAAFLLSSLKSSQNRNLRAAVDEQAKEKEKLRKAVGDLKIELAMERLRNKRIKLCGLMEFILQLLLVISLSSFFLFI

Query:  AFK
        AFK
Subjt:  AFK

A0A6J1C920 uncharacterized protein LOC1110094321.6e-3383.5Show/hide
Query:  MERVEAESRDEAMRSKTAFRCAKAAFLLSSLKSSQNRNLRAAVDEQAKEKEKLRKAVGDLKIELAMERLRNKRIKLCGLMEFILQLLLVISLSSFFLFIA
        ME+VEAESRDEAMRS+TAFRCAKAAF+LSSLKSSQN  LRA V E  KEKEKLRK +GDLK+ELA ERLRNKRIKLCGLMEF+LQ+LLVI+LSSFF FIA
Subjt:  MERVEAESRDEAMRSKTAFRCAKAAFLLSSLKSSQNRNLRAAVDEQAKEKEKLRKAVGDLKIELAMERLRNKRIKLCGLMEFILQLLLVISLSSFFLFIA

Query:  FKS
        FKS
Subjt:  FKS

A0A6J1FJM5 uncharacterized protein LOC1114459521.4e-3791.26Show/hide
Query:  MERVEAESRDEAMRSKTAFRCAKAAFLLSSLKSSQNRNLRAAVDEQAKEKEKLRKAVGDLKIELAMERLRNKRIKLCGLMEFILQLLLVISLSSFFLFIA
        ME VEAESRDEAMRSKTAFRCAKAAFL+SS KS QNRNLRA+VDEQAKEKE+LRK VGDLKIELAMER RNKRIKLCGLMEF+LQLLLVISLSSFFLFIA
Subjt:  MERVEAESRDEAMRSKTAFRCAKAAFLLSSLKSSQNRNLRAAVDEQAKEKEKLRKAVGDLKIELAMERLRNKRIKLCGLMEFILQLLLVISLSSFFLFIA

Query:  FKS
        FKS
Subjt:  FKS

A0A6P5SUI7 uncharacterized protein LOC1107595562.8e-1755.14Show/hide
Query:  MERVEAESRD---EAMRSKTAFRCAKAAFLLSSLKSSQNRNLRAAVD-EQAKEKEKLRKAVGDLKIELAMERLRNKRIKLCGLMEFILQLLLVISLSSFF
        ME  E +++    EA+RS+ A RCAKAA LLSSLKSS NR+L  A+D +   EKE LR+ +GDLK+E+A ERL++KRIKLCG +E +LQL+L+++LS+FF
Subjt:  MERVEAESRD---EAMRSKTAFRCAKAAFLLSSLKSSQNRNLRAAVD-EQAKEKEKLRKAVGDLKIELAMERLRNKRIKLCGLMEFILQLLLVISLSSFF

Query:  LFIAFKS
          +AF++
Subjt:  LFIAFKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G78172.1 unknown protein2.5e-1047.78Show/hide
Query:  SRDEAMRSKTAFRCAKAAFLLSSLKSSQNRNLRAAVDEQAKEKEKLRKAVGDLKIELAMERLRNKRIKLCGLMEFILQLLLVISLSSFFL
        S+DE  R  TA RCA+A  LL SL SS  R + +A ++Q  EK + R+ + DL+ +L M +++  RIKLCGLME +L + LV+ LS+FFL
Subjt:  SRDEAMRSKTAFRCAKAAFLLSSLKSSQNRNLRAAVDEQAKEKEKLRKAVGDLKIELAMERLRNKRIKLCGLMEFILQLLLVISLSSFFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGAGTCGAAGCGGAATCCAGAGATGAAGCAATGAGATCCAAAACCGCCTTTCGATGTGCAAAAGCAGCTTTTCTGCTTTCTTCGCTCAAATCCTCCCAAAATCG
CAACCTCAGAGCCGCTGTCGATGAACAAGCGAAGGAGAAGGAGAAGCTGAGGAAAGCTGTGGGAGATTTGAAGATCGAGTTGGCTATGGAACGTCTGAGGAATAAGAGGA
TCAAGCTCTGTGGTTTAATGGAATTCATTCTTCAGCTCCTGCTGGTTATATCTCTTTCGAGCTTCTTCCTTTTTATCGCCTTCAAATCTGCCTGA
mRNA sequenceShow/hide mRNA sequence
GCCTTGGCCATTGGCACGGCATGAATATATTGATGGTTTATTTTATTTCGCCAATTACCAATTCCCCAACCCGGCTTTTCCTTTTCATATAACTCAACACACTTAAAATC
ACTTGTTTCAGTTCTTAAGGATTCTTCACGATTAAGTGTAGCGTTACGAGGAATTACCTGCGATTCCTGCTCCAAGCAACGTACATTTTGAGCAGATCATGGAGAGAGTC
GAAGCGGAATCCAGAGATGAAGCAATGAGATCCAAAACCGCCTTTCGATGTGCAAAAGCAGCTTTTCTGCTTTCTTCGCTCAAATCCTCCCAAAATCGCAACCTCAGAGC
CGCTGTCGATGAACAAGCGAAGGAGAAGGAGAAGCTGAGGAAAGCTGTGGGAGATTTGAAGATCGAGTTGGCTATGGAACGTCTGAGGAATAAGAGGATCAAGCTCTGTG
GTTTAATGGAATTCATTCTTCAGCTCCTGCTGGTTATATCTCTTTCGAGCTTCTTCCTTTTTATCGCCTTCAAATCTGCCTGAACTCTGATAGAATCAATAGTAGGACCA
TGGAGTTTGCTTATCGAACAACCCTAACCAGTTCACGAAGTACTACTGGATTTATCGGCTTCCC
Protein sequenceShow/hide protein sequence
MERVEAESRDEAMRSKTAFRCAKAAFLLSSLKSSQNRNLRAAVDEQAKEKEKLRKAVGDLKIELAMERLRNKRIKLCGLMEFILQLLLVISLSSFFLFIAFKSA