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Tan0010467 (gene) of Snake gourd v1 genome

Gene IDTan0010467
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG09:41083047..41086536
RNA-Seq ExpressionTan0010467
SyntenyTan0010467
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025901.1 hypothetical protein E6C27_scaffold34G001890 [Cucumis melo var. makuwa]1.6e-0745.16Show/hide
Query:  MSADQYAMDLGFTQGSSIPTTFVEAVNPPKRFIPIPEIKNYFEKPLQISEPIVEVEFDEFLNTKSKLLAALAQTTIEADLQKKL----NQVTSIVSSSS-
        MSADQYAM+LGFT   +    F  A         I  IK +F +   + + I + +  +FLN KSKLLA LAQ T +AD Q+ L    N  TS  S+SS 
Subjt:  MSADQYAMDLGFTQGSSIPTTFVEAVNPPKRFIPIPEIKNYFEKPLQISEPIVEVEFDEFLNTKSKLLAALAQTTIEADLQKKL----NQVTSIVSSSS-

Query:  PQNSEVEEDDEYDINDPFLDSQPM
         Q  E + D EYD+++PFLDSQPM
Subjt:  PQNSEVEEDDEYDINDPFLDSQPM

KAA0043136.1 putative Retrotransposon protein [Cucumis melo var. makuwa]4.4e-0530.43Show/hide
Query:  MSADQYAMDLGFT--------------------------------------------------QGSSIPTTFVEAVNPPKRFIPIPEIKNYFEKPLQISE
        +SADQYAMDLGFT                                                  + S+ PTT+ +AV P KRF+P PEIK+YF+KP+ + +
Subjt:  MSADQYAMDLGFT--------------------------------------------------QGSSIPTTFVEAVNPPKRFIPIPEIKNYFEKPLQISE

Query:  PIVEVEFDEFLNTKS
        PI+E+E+    + ++
Subjt:  PIVEVEFDEFLNTKS

KAA0053156.1 hypothetical protein E6C27_scaffold1248G00100 [Cucumis melo var. makuwa]1.2e-0535.85Show/hide
Query:  QGSSIPTTFVEAVNPPKRFIPIPEIKNYFEKPLQISEPIVEVEFDEFLNTKSKLLAALAQTTIEADLQKKLNQVTSIVSSSSPQNSEVEEDDEYDINDPF
        + S+ PTT+ +AV P KRF+P  EIK+YF+KP  + +PI+E  +                                  +SSS Q  E + D EYD++D F
Subjt:  QGSSIPTTFVEAVNPPKRFIPIPEIKNYFEKPLQISEPIVEVEFDEFLNTKSKLLAALAQTTIEADLQKKLNQVTSIVSSSSPQNSEVEEDDEYDINDPF

Query:  LDSQPM
        LDSQPM
Subjt:  LDSQPM

KAA0066384.1 hypothetical protein E6C27_scaffold21G004590 [Cucumis melo var. makuwa]3.1e-0636.89Show/hide
Query:  QGSSIPTTFVEAVNPPKRFIPIPEIKNYFEKPLQISEPIVEVEFDEFLNTKSKLLAALAQTTIEADLQKKLNQVTSIVSSSSPQNSEVEEDDEYDINDPF
        + S+  TT+ +AV P KRF+P PEIK+YF+K + + +PI+E+E+    ++ SK                          SSS Q  E + D EYD++DPF
Subjt:  QGSSIPTTFVEAVNPPKRFIPIPEIKNYFEKPLQISEPIVEVEFDEFLNTKSKLLAALAQTTIEADLQKKLNQVTSIVSSSSPQNSEVEEDDEYDINDPF

Query:  LDS
        LDS
Subjt:  LDS

TYJ98361.1 hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa]3.9e-1745.16Show/hide
Query:  QGSSIPTTFVEAVNPPKRFIPIPEIKNYFEKPLQISEPIVEVEFD--------------EFLNTKSKLLAALAQTTIEADLQKKLNQVTSIVSSSSPQNS
        + S++PTT+ +AV P K+F+P  EIK+YF+KP+ I +PI+E+E+               +FLN K K LAAL Q TI+AD Q+ L+   +  SSS P  S
Subjt:  QGSSIPTTFVEAVNPPKRFIPIPEIKNYFEKPLQISEPIVEVEFD--------------EFLNTKSKLLAALAQTTIEADLQKKLNQVTSIVSSSSPQNS

Query:  EVEEDD-----EYDINDPFLDSQP
         ++ED+     EYD++DPFLDSQP
Subjt:  EVEEDD-----EYDINDPFLDSQP

TrEMBL top hitse value%identityAlignment
A0A5A7SNT5 Uncharacterized protein7.9e-0845.16Show/hide
Query:  MSADQYAMDLGFTQGSSIPTTFVEAVNPPKRFIPIPEIKNYFEKPLQISEPIVEVEFDEFLNTKSKLLAALAQTTIEADLQKKL----NQVTSIVSSSS-
        MSADQYAM+LGFT   +    F  A         I  IK +F +   + + I + +  +FLN KSKLLA LAQ T +AD Q+ L    N  TS  S+SS 
Subjt:  MSADQYAMDLGFTQGSSIPTTFVEAVNPPKRFIPIPEIKNYFEKPLQISEPIVEVEFDEFLNTKSKLLAALAQTTIEADLQKKL----NQVTSIVSSSS-

Query:  PQNSEVEEDDEYDINDPFLDSQPM
         Q  E + D EYD+++PFLDSQPM
Subjt:  PQNSEVEEDDEYDINDPFLDSQPM

A0A5A7TM80 Putative Retrotransposon protein2.2e-0530.43Show/hide
Query:  MSADQYAMDLGFT--------------------------------------------------QGSSIPTTFVEAVNPPKRFIPIPEIKNYFEKPLQISE
        +SADQYAMDLGFT                                                  + S+ PTT+ +AV P KRF+P PEIK+YF+KP+ + +
Subjt:  MSADQYAMDLGFT--------------------------------------------------QGSSIPTTFVEAVNPPKRFIPIPEIKNYFEKPLQISE

Query:  PIVEVEFDEFLNTKS
        PI+E+E+    + ++
Subjt:  PIVEVEFDEFLNTKS

A0A5A7UFZ9 Uncharacterized protein5.7e-0635.85Show/hide
Query:  QGSSIPTTFVEAVNPPKRFIPIPEIKNYFEKPLQISEPIVEVEFDEFLNTKSKLLAALAQTTIEADLQKKLNQVTSIVSSSSPQNSEVEEDDEYDINDPF
        + S+ PTT+ +AV P KRF+P  EIK+YF+KP  + +PI+E  +                                  +SSS Q  E + D EYD++D F
Subjt:  QGSSIPTTFVEAVNPPKRFIPIPEIKNYFEKPLQISEPIVEVEFDEFLNTKSKLLAALAQTTIEADLQKKLNQVTSIVSSSSPQNSEVEEDDEYDINDPF

Query:  LDSQPM
        LDSQPM
Subjt:  LDSQPM

A0A5D3BI61 Uncharacterized protein1.9e-1745.16Show/hide
Query:  QGSSIPTTFVEAVNPPKRFIPIPEIKNYFEKPLQISEPIVEVEFD--------------EFLNTKSKLLAALAQTTIEADLQKKLNQVTSIVSSSSPQNS
        + S++PTT+ +AV P K+F+P  EIK+YF+KP+ I +PI+E+E+               +FLN K K LAAL Q TI+AD Q+ L+   +  SSS P  S
Subjt:  QGSSIPTTFVEAVNPPKRFIPIPEIKNYFEKPLQISEPIVEVEFD--------------EFLNTKSKLLAALAQTTIEADLQKKLNQVTSIVSSSSPQNS

Query:  EVEEDD-----EYDINDPFLDSQP
         ++ED+     EYD++DPFLDSQP
Subjt:  EVEEDD-----EYDINDPFLDSQP

A0A5D3BPD3 Uncharacterized protein1.5e-0636.89Show/hide
Query:  QGSSIPTTFVEAVNPPKRFIPIPEIKNYFEKPLQISEPIVEVEFDEFLNTKSKLLAALAQTTIEADLQKKLNQVTSIVSSSSPQNSEVEEDDEYDINDPF
        + S+  TT+ +AV P KRF+P PEIK+YF+K + + +PI+E+E+    ++ SK                          SSS Q  E + D EYD++DPF
Subjt:  QGSSIPTTFVEAVNPPKRFIPIPEIKNYFEKPLQISEPIVEVEFDEFLNTKSKLLAALAQTTIEADLQKKLNQVTSIVSSSSPQNSEVEEDDEYDINDPF

Query:  LDS
        LDS
Subjt:  LDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGCCGATCAATACGCAATGGATCTGGGTTTCACTCAAGGATCTTCAATCCCTACAACCTTTGTTGAAGCCGTCAATCCTCCCAAAAGGTTTATCCCTATACCTGA
AATCAAAAATTATTTCGAAAAACCACTTCAAATTTCTGAGCCAATTGTCGAAGTTGAATTCGATGAGTTCCTCAATACCAAATCAAAGCTGCTAGCTGCCTTAGCACAAA
CAACAATAGAGGCAGATTTACAAAAAAAATTGAATCAAGTTACTTCAATAGTATCTTCGTCTTCTCCACAAAACTCTGAAGTGGAAGAAGATGATGAATATGATATCAAT
GATCCGTTTTTAGATTCCCAACCAATGCCCCACGTATCTTCAATCTCGGCCCCCAAACCATTCCCTGAATTGGAAAACCTCCGTGGAATGGCTCCTCAGTACATCACCGA
TCTTGCGGTTCATATTTGGAACAACTTCCAAATCTATCATGAACTTCCTGAGCCAAACAACTTCCTTTGCAGCTTCACAAGCCGCAACATCCTCGGCTTCCATCGTGGAA
TCAGCGATGCATCCCTACTTGATGCTTCACCACACTACAACTCCTCCATTCAGAATGAAGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGCCGATCAATACGCAATGGATCTGGGTTTCACTCAAGGATCTTCAATCCCTACAACCTTTGTTGAAGCCGTCAATCCTCCCAAAAGGTTTATCCCTATACCTGA
AATCAAAAATTATTTCGAAAAACCACTTCAAATTTCTGAGCCAATTGTCGAAGTTGAATTCGATGAGTTCCTCAATACCAAATCAAAGCTGCTAGCTGCCTTAGCACAAA
CAACAATAGAGGCAGATTTACAAAAAAAATTGAATCAAGTTACTTCAATAGTATCTTCGTCTTCTCCACAAAACTCTGAAGTGGAAGAAGATGATGAATATGATATCAAT
GATCCGTTTTTAGATTCCCAACCAATGCCCCACGTATCTTCAATCTCGGCCCCCAAACCATTCCCTGAATTGGAAAACCTCCGTGGAATGGCTCCTCAGTACATCACCGA
TCTTGCGGTTCATATTTGGAACAACTTCCAAATCTATCATGAACTTCCTGAGCCAAACAACTTCCTTTGCAGCTTCACAAGCCGCAACATCCTCGGCTTCCATCGTGGAA
TCAGCGATGCATCCCTACTTGATGCTTCACCACACTACAACTCCTCCATTCAGAATGAAGGCTGA
Protein sequenceShow/hide protein sequence
MSADQYAMDLGFTQGSSIPTTFVEAVNPPKRFIPIPEIKNYFEKPLQISEPIVEVEFDEFLNTKSKLLAALAQTTIEADLQKKLNQVTSIVSSSSPQNSEVEEDDEYDIN
DPFLDSQPMPHVSSISAPKPFPELENLRGMAPQYITDLAVHIWNNFQIYHELPEPNNFLCSFTSRNILGFHRGISDASLLDASPHYNSSIQNEG