| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0037289.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 8.0e-23 | 35.14 | Show/hide |
Query: EAKKTERFIMGLDENVRGFIQALAPRLRLRKITI---------------NNRSGNSGGEIGHSSKE----------------CGKSRLGKCMALVRACFK
+A +TE+F+ GL N++G ++AL P + I +R GG +E CG+ G+C+A CF+
Subjt: EAKKTERFIMGLDENVRGFIQALAPRLRLRKITI---------------NNRSGNSGGEIGHSSKE----------------CGKSRLGKCMALVRACFK
Query: CGKEGHRANISARIKPKTSHPQIMSSGPAVKPAIQQGRAYASTSRDIYGSDSVVTGTLPLLGHLAFVLFDSRFYDSFISRI-----------LCMDWLAQ
C + GH A+ R KP P S A QQGR +A+T ++ + VVTGTLP+LGH AFVLFDS SFIS + L MDWL+
Subjt: CGKEGHRANISARIKPKTSHPQIMSSGPAVKPAIQQGRAYASTSRDIYGSDSVVTGTLPLLGHLAFVLFDSRFYDSFISRI-----------LCMDWLAQ
Query: NHACIDCFRKEVVFTPPNQPGY
NHA IDCF KEV+F P++P +
Subjt: NHACIDCFRKEVVFTPPNQPGY
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| KAA0039148.1 pol protein [Cucumis melo var. makuwa] | 2.2e-20 | 32.31 | Show/hide |
Query: EAKKTERFIMGLDENVRGFIQALAPR-----------LRLRKITINNRSGNSGGEIGHSSKECGKSRL----------GKCMALVRACFKCGKEGHRANI
EA + E+F+ GL +++G ++AL P L L + ++++ G +G + K + + G+C+A CF+C + H A+
Subjt: EAKKTERFIMGLDENVRGFIQALAPR-----------LRLRKITINNRSGNSGGEIGHSSKECGKSRL----------GKCMALVRACFKCGKEGHRANI
Query: SARIKPKTSHPQIMSSGPAVKPAIQQGRAYASTSRDIYGSDSVVTGTLPLLGHLAFVLFDSRFYDSFISRILC-----------------------MDWL
+ KP + P S A QQGR +A+T ++ + ++VTGTLP+L H AFVLFDS SFIS + MDWL
Subjt: SARIKPKTSHPQIMSSGPAVKPAIQQGRAYASTSRDIYGSDSVVTGTLPLLGHLAFVLFDSRFYDSFISRILC-----------------------MDWL
Query: AQNHACIDCFRKEVVFTPPNQPGYSSEAQ
+ NHACIDCF KEVVF PP+ P + Q
Subjt: AQNHACIDCFRKEVVFTPPNQPGYSSEAQ
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| KAA0054634.1 pol protein [Cucumis melo var. makuwa] | 1.3e-20 | 32.81 | Show/hide |
Query: EAKKTERFIMGLDENVRGFIQALAP-------RLRL-----------------------RKI-----TINNRSGNSGGEIGHSSKE--------------
EA +TE+F+ GL +++G ++AL P R+ L RK+ + R+ SGG +E
Subjt: EAKKTERFIMGLDENVRGFIQALAP-------RLRL-----------------------RKI-----TINNRSGNSGGEIGHSSKE--------------
Query: --CGKSRLGKCMALVRACFKCGKEGHRANISARIKPKTSHPQIMSSGPAVKPAIQQGRAYASTSRDIYGSDSVVTGTLPLLGHLAFVLFDSRFYDSFISR
CG+ G+C+A CF+C + GH A++ R +T+ PQ +S QQGR +A+T ++ S +VVTGTLP+LGH AFVLFDS SFIS
Subjt: --CGKSRLGKCMALVRACFKCGKEGHRANISARIKPKTSHPQIMSSGPAVKPAIQQGRAYASTSRDIYGSDSVVTGTLPLLGHLAFVLFDSRFYDSFISR
Query: -----------------------------ILCMDWLAQNHACIDCFRKEVVFTPPN
IL MDWL+ NHA IDCF KEVVF PP+
Subjt: -----------------------------ILCMDWLAQNHACIDCFRKEVVFTPPN
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| KAA0061201.1 pol protein [Cucumis melo var. makuwa] | 1.4e-22 | 35.24 | Show/hide |
Query: EAKKTERFIMGLDENVRGFIQALAPR-----------LRLRKITINNRSGNSG-----GEIGHSSKE------CGKSRLGKCMALVRACFKCGKEGHRAN
EA +TE+F+ GL +++G ++AL P L L + ++++ G G + +E CG+ G+C+A CF+C + GH A+
Subjt: EAKKTERFIMGLDENVRGFIQALAPR-----------LRLRKITINNRSGNSG-----GEIGHSSKE------CGKSRLGKCMALVRACFKCGKEGHRAN
Query: ISARIKPKTSHPQIMSSGPAVKPAIQQGRAYASTSRDIYGSDSVVTGTLPLLGHLAFVLFDSRFYDSFISR-----------------------------
+ R +T+ PQ +S QQGR YA+T ++ + +VVTGTLP+LGH AFVLFDS SFIS
Subjt: ISARIKPKTSHPQIMSSGPAVKPAIQQGRAYASTSRDIYGSDSVVTGTLPLLGHLAFVLFDSRFYDSFISR-----------------------------
Query: ILCMDWLAQNHACIDCFRKEVVFTPPN
IL MDWL+ NHA IDCF KEVVF PP+
Subjt: ILCMDWLAQNHACIDCFRKEVVFTPPN
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| TYK26964.1 pol protein [Cucumis melo var. makuwa] | 2.2e-20 | 32.31 | Show/hide |
Query: EAKKTERFIMGLDENVRGFIQALAPR-----------LRLRKITINNRSGNSGGEIGHSSKECGKSRL----------GKCMALVRACFKCGKEGHRANI
EA + E+F+ GL +++G ++AL P L L + ++++ G +G + K + + G+C+A CF+C + H A+
Subjt: EAKKTERFIMGLDENVRGFIQALAPR-----------LRLRKITINNRSGNSGGEIGHSSKECGKSRL----------GKCMALVRACFKCGKEGHRANI
Query: SARIKPKTSHPQIMSSGPAVKPAIQQGRAYASTSRDIYGSDSVVTGTLPLLGHLAFVLFDSRFYDSFISRILC-----------------------MDWL
+ KP + P S A QQGR +A+T ++ + ++VTGTLP+L H AFVLFDS SFIS + MDWL
Subjt: SARIKPKTSHPQIMSSGPAVKPAIQQGRAYASTSRDIYGSDSVVTGTLPLLGHLAFVLFDSRFYDSFISRILC-----------------------MDWL
Query: AQNHACIDCFRKEVVFTPPNQPGYSSEAQ
+ NHACIDCF KEVVF PP+ P + Q
Subjt: AQNHACIDCFRKEVVFTPPNQPGYSSEAQ
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T8E0 Pol protein | 1.1e-20 | 32.31 | Show/hide |
Query: EAKKTERFIMGLDENVRGFIQALAPR-----------LRLRKITINNRSGNSGGEIGHSSKECGKSRL----------GKCMALVRACFKCGKEGHRANI
EA + E+F+ GL +++G ++AL P L L + ++++ G +G + K + + G+C+A CF+C + H A+
Subjt: EAKKTERFIMGLDENVRGFIQALAPR-----------LRLRKITINNRSGNSGGEIGHSSKECGKSRL----------GKCMALVRACFKCGKEGHRANI
Query: SARIKPKTSHPQIMSSGPAVKPAIQQGRAYASTSRDIYGSDSVVTGTLPLLGHLAFVLFDSRFYDSFISRILC-----------------------MDWL
+ KP + P S A QQGR +A+T ++ + ++VTGTLP+L H AFVLFDS SFIS + MDWL
Subjt: SARIKPKTSHPQIMSSGPAVKPAIQQGRAYASTSRDIYGSDSVVTGTLPLLGHLAFVLFDSRFYDSFISRILC-----------------------MDWL
Query: AQNHACIDCFRKEVVFTPPNQPGYSSEAQ
+ NHACIDCF KEVVF PP+ P + Q
Subjt: AQNHACIDCFRKEVVFTPPNQPGYSSEAQ
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| A0A5A7UHL7 Reverse transcriptase | 6.2e-21 | 32.81 | Show/hide |
Query: EAKKTERFIMGLDENVRGFIQALAP-------RLRL-----------------------RKI-----TINNRSGNSGGEIGHSSKE--------------
EA +TE+F+ GL +++G ++AL P R+ L RK+ + R+ SGG +E
Subjt: EAKKTERFIMGLDENVRGFIQALAP-------RLRL-----------------------RKI-----TINNRSGNSGGEIGHSSKE--------------
Query: --CGKSRLGKCMALVRACFKCGKEGHRANISARIKPKTSHPQIMSSGPAVKPAIQQGRAYASTSRDIYGSDSVVTGTLPLLGHLAFVLFDSRFYDSFISR
CG+ G+C+A CF+C + GH A++ R +T+ PQ +S QQGR +A+T ++ S +VVTGTLP+LGH AFVLFDS SFIS
Subjt: --CGKSRLGKCMALVRACFKCGKEGHRANISARIKPKTSHPQIMSSGPAVKPAIQQGRAYASTSRDIYGSDSVVTGTLPLLGHLAFVLFDSRFYDSFISR
Query: -----------------------------ILCMDWLAQNHACIDCFRKEVVFTPPN
IL MDWL+ NHA IDCF KEVVF PP+
Subjt: -----------------------------ILCMDWLAQNHACIDCFRKEVVFTPPN
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| A0A5A7V5X5 Pol protein | 6.6e-23 | 35.24 | Show/hide |
Query: EAKKTERFIMGLDENVRGFIQALAPR-----------LRLRKITINNRSGNSG-----GEIGHSSKE------CGKSRLGKCMALVRACFKCGKEGHRAN
EA +TE+F+ GL +++G ++AL P L L + ++++ G G + +E CG+ G+C+A CF+C + GH A+
Subjt: EAKKTERFIMGLDENVRGFIQALAPR-----------LRLRKITINNRSGNSG-----GEIGHSSKE------CGKSRLGKCMALVRACFKCGKEGHRAN
Query: ISARIKPKTSHPQIMSSGPAVKPAIQQGRAYASTSRDIYGSDSVVTGTLPLLGHLAFVLFDSRFYDSFISR-----------------------------
+ R +T+ PQ +S QQGR YA+T ++ + +VVTGTLP+LGH AFVLFDS SFIS
Subjt: ISARIKPKTSHPQIMSSGPAVKPAIQQGRAYASTSRDIYGSDSVVTGTLPLLGHLAFVLFDSRFYDSFISR-----------------------------
Query: ILCMDWLAQNHACIDCFRKEVVFTPPN
IL MDWL+ NHA IDCF KEVVF PP+
Subjt: ILCMDWLAQNHACIDCFRKEVVFTPPN
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| A0A5D3C3E0 Ty3-gypsy retrotransposon protein | 3.9e-23 | 35.14 | Show/hide |
Query: EAKKTERFIMGLDENVRGFIQALAPRLRLRKITI---------------NNRSGNSGGEIGHSSKE----------------CGKSRLGKCMALVRACFK
+A +TE+F+ GL N++G ++AL P + I +R GG +E CG+ G+C+A CF+
Subjt: EAKKTERFIMGLDENVRGFIQALAPRLRLRKITI---------------NNRSGNSGGEIGHSSKE----------------CGKSRLGKCMALVRACFK
Query: CGKEGHRANISARIKPKTSHPQIMSSGPAVKPAIQQGRAYASTSRDIYGSDSVVTGTLPLLGHLAFVLFDSRFYDSFISRI-----------LCMDWLAQ
C + GH A+ R KP P S A QQGR +A+T ++ + VVTGTLP+LGH AFVLFDS SFIS + L MDWL+
Subjt: CGKEGHRANISARIKPKTSHPQIMSSGPAVKPAIQQGRAYASTSRDIYGSDSVVTGTLPLLGHLAFVLFDSRFYDSFISRI-----------LCMDWLAQ
Query: NHACIDCFRKEVVFTPPNQPGY
NHA IDCF KEV+F P++P +
Subjt: NHACIDCFRKEVVFTPPNQPGY
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| A0A5D3DTY0 Pol protein | 1.1e-20 | 32.31 | Show/hide |
Query: EAKKTERFIMGLDENVRGFIQALAPR-----------LRLRKITINNRSGNSGGEIGHSSKECGKSRL----------GKCMALVRACFKCGKEGHRANI
EA + E+F+ GL +++G ++AL P L L + ++++ G +G + K + + G+C+A CF+C + H A+
Subjt: EAKKTERFIMGLDENVRGFIQALAPR-----------LRLRKITINNRSGNSGGEIGHSSKECGKSRL----------GKCMALVRACFKCGKEGHRANI
Query: SARIKPKTSHPQIMSSGPAVKPAIQQGRAYASTSRDIYGSDSVVTGTLPLLGHLAFVLFDSRFYDSFISRILC-----------------------MDWL
+ KP + P S A QQGR +A+T ++ + ++VTGTLP+L H AFVLFDS SFIS + MDWL
Subjt: SARIKPKTSHPQIMSSGPAVKPAIQQGRAYASTSRDIYGSDSVVTGTLPLLGHLAFVLFDSRFYDSFISRILC-----------------------MDWL
Query: AQNHACIDCFRKEVVFTPPNQPGYSSEAQ
+ NHACIDCF KEVVF PP+ P + Q
Subjt: AQNHACIDCFRKEVVFTPPNQPGYSSEAQ
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