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Tan0010525 (gene) of Snake gourd v1 genome

Gene IDTan0010525
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCalcium-binding EF-hand family protein, putative
Genome locationLG01:113909557..113910656
RNA-Seq ExpressionTan0010525
SyntenyTan0010525
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064378.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]4.9e-3177.27Show/hide
Query:  KSKAAAVPSENGYSAKELREIFSQMDTNEDGGLGLMEIKDALKRLDAELPVHLAFKALCHADRNRDGKLGEDEIEKFVKYLMSQGYVV
        KS + AV SE+ YSAKELR+IF+QMDTNEDGGLGL EIK+ALK+LDAE+PVHLA+ ALC+ADRNRDGKLGE+EI++FVKY+MS+GYVV
Subjt:  KSKAAAVPSENGYSAKELREIFSQMDTNEDGGLGLMEIKDALKRLDAELPVHLAFKALCHADRNRDGKLGEDEIEKFVKYLMSQGYVV

KAG6608479.1 hypothetical protein SDJN03_01821, partial [Cucurbita argyrosperma subsp. sororia]3.1e-3878.1Show/hide
Query:  LTNTINYRTMSSYGRKSKSKAAAVPSENGYSAKELREIFSQMDTNEDGGLGLMEIKDALKRLDAELPVHLAFKALCHADRNRDGKLGEDEIEKFVKYLMS
        + N ++Y+TMSSYGR  KSKA A  SE+GYSAKELREIF+QMDTNEDGGLGL EIK+ALK+LDAE PVHLAFKALC +DRNRDGKLG DEI+KF+KYLMS
Subjt:  LTNTINYRTMSSYGRKSKSKAAAVPSENGYSAKELREIFSQMDTNEDGGLGLMEIKDALKRLDAELPVHLAFKALCHADRNRDGKLGEDEIEKFVKYLMS

Query:  QGYVV
        +GYVV
Subjt:  QGYVV

KAG7024250.1 hypothetical protein SDJN02_13064, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-2776.25Show/hide
Query:  SENGYSAKELREIFSQMDTNEDGGLGLMEIKDALKRLDAELPVHLAFKALCHADRNRDGKLGEDEIEKFVKYLMSQGYVV
        S++ YS KEL+EIF QMDTNEDGGLGL EIK+ALK+LDAE P+HLA+KALCHADRN DGKLGE+EI++FVKY++S+GYVV
Subjt:  SENGYSAKELREIFSQMDTNEDGGLGLMEIKDALKRLDAELPVHLAFKALCHADRNRDGKLGEDEIEKFVKYLMSQGYVV

KAG7037807.1 hypothetical protein SDJN02_01438, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-3879.61Show/hide
Query:  NTINYRTMSSYGRKSKSKAAAVPSENGYSAKELREIFSQMDTNEDGGLGLMEIKDALKRLDAELPVHLAFKALCHADRNRDGKLGEDEIEKFVKYLMSQG
        N ++Y+TMSSYGR  KSKA A  SE+GYSAKELREIF+QMDTNEDGGLGL EIK+ALK+LDAE PVHLAFKALC +DRNRDGKLG DEI+KF+KYLMS+G
Subjt:  NTINYRTMSSYGRKSKSKAAAVPSENGYSAKELREIFSQMDTNEDGGLGLMEIKDALKRLDAELPVHLAFKALCHADRNRDGKLGEDEIEKFVKYLMSQG

Query:  YVV
        YVV
Subjt:  YVV

KGN55187.1 hypothetical protein Csa_012728 [Cucumis sativus]5.7e-3273.68Show/hide
Query:  SSYGRKSKSKAAAVPSENGYSAKELREIFSQMDTNEDGGLGLMEIKDALKRLDAELPVHLAFKALCHADRNRDGKLGEDEIEKFVKYLMSQGYVV
        S +  K+KS +  V SE+ YSAKELR+IF+QMDTNEDGGLGL EIK+ALK+LDAE+PVHLA+ ALCHADRNRDGKLGE+EI++FVKY+MS+GYVV
Subjt:  SSYGRKSKSKAAAVPSENGYSAKELREIFSQMDTNEDGGLGLMEIKDALKRLDAELPVHLAFKALCHADRNRDGKLGEDEIEKFVKYLMSQGYVV

TrEMBL top hitse value%identityAlignment
A0A061FBR4 Calcium-binding EF-hand family protein, putative2.5e-0946.48Show/hide
Query:  ELREIFSQMDTNEDGGLGLMEIKDALKRLDAELPVHLAFKALCHADRNRDGKLGEDEIEKFVKYLMSQGYV
        ++R IF++ D N+DG L   E+KDA   L + +P   A+ AL HAD N DG + EDE EK VKY + +GY+
Subjt:  ELREIFSQMDTNEDGGLGLMEIKDALKRLDAELPVHLAFKALCHADRNRDGKLGEDEIEKFVKYLMSQGYV

A0A0A0L3J7 Uncharacterized protein2.8e-3273.68Show/hide
Query:  SSYGRKSKSKAAAVPSENGYSAKELREIFSQMDTNEDGGLGLMEIKDALKRLDAELPVHLAFKALCHADRNRDGKLGEDEIEKFVKYLMSQGYVV
        S +  K+KS +  V SE+ YSAKELR+IF+QMDTNEDGGLGL EIK+ALK+LDAE+PVHLA+ ALCHADRNRDGKLGE+EI++FVKY+MS+GYVV
Subjt:  SSYGRKSKSKAAAVPSENGYSAKELREIFSQMDTNEDGGLGLMEIKDALKRLDAELPVHLAFKALCHADRNRDGKLGEDEIEKFVKYLMSQGYVV

A0A5D3D9N2 Putative calcium-binding protein CML102.4e-3177.27Show/hide
Query:  KSKAAAVPSENGYSAKELREIFSQMDTNEDGGLGLMEIKDALKRLDAELPVHLAFKALCHADRNRDGKLGEDEIEKFVKYLMSQGYVV
        KS + AV SE+ YSAKELR+IF+QMDTNEDGGLGL EIK+ALK+LDAE+PVHLA+ ALC+ADRNRDGKLGE+EI++FVKY+MS+GYVV
Subjt:  KSKAAAVPSENGYSAKELREIFSQMDTNEDGGLGLMEIKDALKRLDAELPVHLAFKALCHADRNRDGKLGEDEIEKFVKYLMSQGYVV

A0A5N6RQD5 Uncharacterized protein5.6e-0934.31Show/hide
Query:  TINYRTMSSYGRKSKSKAAAVPSENGYSAKELREIFSQMDTNEDGGLGLMEIKDALKRLDAELPVHLAFKALCHADRNRDGKLGEDEIEKFVKYLMSQGY
        TI  + +++   K+K K   +P    Y+  +L  +F + D N DG L   E+++A   L +  P   AF+ALCHAD+N DG + E E++  V+Y +  GY
Subjt:  TINYRTMSSYGRKSKSKAAAVPSENGYSAKELREIFSQMDTNEDGGLGLMEIKDALKRLDAELPVHLAFKALCHADRNRDGKLGEDEIEKFVKYLMSQGY

Query:  VV
         +
Subjt:  VV

A0A6A1UYX3 Putative calcium-binding protein CML104.3e-0935.51Show/hide
Query:  PPLTNTINYRTMSSYGRKSKSKAAAVPSENGYSAKELREIFSQMDTNEDGGLGLMEIKDALKRLDAELPVHLAFKALCHADRNRDGKLGEDEIEKFVKYL
        P   +TI  + ++    K   +   VP    Y+ ++LR +F + DTN DG L   E+++A + L +  P   AF+AL HADRN DG++ E E++  V Y 
Subjt:  PPLTNTINYRTMSSYGRKSKSKAAAVPSENGYSAKELREIFSQMDTNEDGGLGLMEIKDALKRLDAELPVHLAFKALCHADRNRDGKLGEDEIEKFVKYL

Query:  MSQGYVV
        +  GY V
Subjt:  MSQGYVV

SwissProt top hitse value%identityAlignment
Q32NH8 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-49.0e-0431.34Show/hide
Query:  FSQMDTNEDGGLGLMEIKDALKRLDAELPVHLAFKALCHADRNRDGKLGEDEIEKFVKYLMSQGYVV
        F + D N+DG +   E++D LK ++ ++  H AF+    AD++  G L  +E   F K L  +  V+
Subjt:  FSQMDTNEDGGLGLMEIKDALKRLDAELPVHLAFKALCHADRNRDGKLGEDEIEKFVKYLMSQGYVV

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGCTCGCGATGAATCCTCAATATTTCTATATAAATTCCCCTTTCCTCCACTTACAAATACAATCAATTACAGAACGATGTCGTCGTACGGTCGAAAATCGAAGTC
GAAGGCGGCGGCCGTTCCGTCGGAGAACGGCTACTCGGCGAAGGAACTGAGAGAGATCTTTAGCCAGATGGATACGAATGAAGACGGGGGATTGGGATTGATGGAGATCA
AGGACGCATTGAAGCGACTGGACGCTGAATTACCGGTTCATCTTGCCTTCAAGGCGCTCTGCCACGCCGATCGAAACAGAGATGGAAAGCTTGGGGAGGATGAGATCGAA
AAGTTCGTCAAGTATTTGATGAGCCAAGGTTATGTTGTGTGA
mRNA sequenceShow/hide mRNA sequence
GGTGTATATATGTTTAATCCTCATCCTTGGAGAAAAGACTTATTCCCATGGCGGCATTGACCAATTTTAACTTTAACCTCAAACAGCAGGCACCATTAATCAACGCAAAC
GACAGTTCCCAAATTGGACGACACTGAAGGACCGAATTCGATTCCATTTTTTTGCCGCAGCGATCGAATCAGAAAGCCGTAACAATCCCATTGGAGAAGATAACTCCGCA
TCTTAATTCAAAATCTAATCTGCTCGCGCGCCGTCGATGGTGGCTCGCGATGAATCCTCAATATTTCTATATAAATTCCCCTTTCCTCCACTTACAAATACAATCAATTA
CAGAACGATGTCGTCGTACGGTCGAAAATCGAAGTCGAAGGCGGCGGCCGTTCCGTCGGAGAACGGCTACTCGGCGAAGGAACTGAGAGAGATCTTTAGCCAGATGGATA
CGAATGAAGACGGGGGATTGGGATTGATGGAGATCAAGGACGCATTGAAGCGACTGGACGCTGAATTACCGGTTCATCTTGCCTTCAAGGCGCTCTGCCACGCCGATCGA
AACAGAGATGGAAAGCTTGGGGAGGATGAGATCGAAAAGTTCGTCAAGTATTTGATGAGCCAAGGTTATGTTGTGTGATTTAACTAATCCGACGAAGCCTCTTACTATTG
CTTGTTCATCGTCGGTTTCTAAAAACTTATCCAATAAATGGCGGATGCGTCTTATATATTGTTCATCAAGTTATTACAGAGATTTGTATTGTATTGTATTGTATATATTG
TTTCTTTTTAATGCCCATCTTTAACATCAGTTTTTTTTTTTTTTTTAGTGCTGGCACCTATAGGGTTGTAAATTTGTTTTTTTAAGGTTGAGAGAAATCTCCCACTCATG
TATTTGTTGAATTAAAAAAAAATTATTTTGTCCTAAAAATTGAATATTGGATATTTTTGCTAATTCATTTTCAAAGATAAAAGGTTCTCAATTTTTTTTAATGGTTCACT
TGAATTTAGCTCAAATAATTAGGCCTATATTCTCGATCCTAGATTAGAAATTTGAATCGCTATCCTAAATGTTGTTGAACTAAAACTATGTTTGAATGAAATTGTAATTC
Protein sequenceShow/hide protein sequence
MVARDESSIFLYKFPFPPLTNTINYRTMSSYGRKSKSKAAAVPSENGYSAKELREIFSQMDTNEDGGLGLMEIKDALKRLDAELPVHLAFKALCHADRNRDGKLGEDEIE
KFVKYLMSQGYVV