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Tan0010541 (gene) of Snake gourd v1 genome

Gene IDTan0010541
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionB12D protein
Genome locationLG04:62405628..62408848
RNA-Seq ExpressionTan0010541
SyntenyTan0010541
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR010530 - NADH-ubiquinone reductase complex 1 MLRQ subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008464582.1 PREDICTED: uncharacterized protein LOC103502424 [Cucumis melo]1.3e-3890.7Show/hide
Query:  MGHWMKPEVYPLLAAMGFVTSMCVFQLTRNVLLNPDVRVNKAHRKMGVLENEEEGEKYAEHSLRRFLRTRPPQIMPTINRFFSQEK
        MG WMKPEVYPLLAAMGFVTSMCVFQLTRN+L+NPDVRVNKAHR+MGVLENEEEGEKY+EHSLRRFLRTRPP+IMPTINR+FSQ+K
Subjt:  MGHWMKPEVYPLLAAMGFVTSMCVFQLTRNVLLNPDVRVNKAHRKMGVLENEEEGEKYAEHSLRRFLRTRPPQIMPTINRFFSQEK
XP_022155075.1 uncharacterized protein LOC111022208 [Momordica charantia]6.0e-3688.37Show/hide
Query:  MGHWMKPEVYPLLAAMGFVTSMCVFQLTRNVLLNPDVRVNKAHRKMGVLENEEEGEKYAEHSLRRFLRTRPPQIMPTINRFFSQEK
        MG WMKPEVYPLLAAMGFVTSMCVFQLTRN+LLNPDVRVNK  R MGVLEN EEGEKYAEH LRRFLRTRPP+IMPTIN FFSQ+K
Subjt:  MGHWMKPEVYPLLAAMGFVTSMCVFQLTRNVLLNPDVRVNKAHRKMGVLENEEEGEKYAEHSLRRFLRTRPPQIMPTINRFFSQEK
XP_022955974.1 uncharacterized protein LOC111457808 [Cucurbita moschata]4.6e-3684.88Show/hide
Query:  MGHWMKPEVYPLLAAMGFVTSMCVFQLTRNVLLNPDVRVNKAHRKMGVLENEEEGEKYAEHSLRRFLRTRPPQIMPTINRFFSQEK
        M  W+KPEVYPL+AAMGFVT++CVFQLTRN+L+NPDVRVNK HR+MGVLENEEEGEKYAEHSLRRFLRTRPP+IMP INRFFSQ+K
Subjt:  MGHWMKPEVYPLLAAMGFVTSMCVFQLTRNVLLNPDVRVNKAHRKMGVLENEEEGEKYAEHSLRRFLRTRPPQIMPTINRFFSQEK
XP_022980760.1 uncharacterized protein LOC111480034 [Cucurbita maxima]5.4e-3787.21Show/hide
Query:  MGHWMKPEVYPLLAAMGFVTSMCVFQLTRNVLLNPDVRVNKAHRKMGVLENEEEGEKYAEHSLRRFLRTRPPQIMPTINRFFSQEK
        M  W+KPEVYPL+AAMGFVT+MCVFQLTRN+L+NPDVRVNK HR+MGVLENEEEGEKYAEHSLRRFLRTRPP+IMPTINRFFSQ+K
Subjt:  MGHWMKPEVYPLLAAMGFVTSMCVFQLTRNVLLNPDVRVNKAHRKMGVLENEEEGEKYAEHSLRRFLRTRPPQIMPTINRFFSQEK
XP_038883437.1 uncharacterized protein LOC120074394 [Benincasa hispida]1.9e-3788.37Show/hide
Query:  MGHWMKPEVYPLLAAMGFVTSMCVFQLTRNVLLNPDVRVNKAHRKMGVLENEEEGEKYAEHSLRRFLRTRPPQIMPTINRFFSQEK
        MG W+KPEVYPLLAAMGFVTSMCVFQLTRN+++NPDVRVNKAHRKMGVLENEEEGEKY+EHSLRRFLRTRPP+IMP IN FFSQ+K
Subjt:  MGHWMKPEVYPLLAAMGFVTSMCVFQLTRNVLLNPDVRVNKAHRKMGVLENEEEGEKYAEHSLRRFLRTRPPQIMPTINRFFSQEK
TrEMBL top hitse value%identityAlignment
A0A067G1N9 Uncharacterized protein5.5e-3583.72Show/hide
Query:  MGHWMKPEVYPLLAAMGFVTSMCVFQLTRNVLLNPDVRVNKAHRKMGVLENEEEGEKYAEHSLRRFLRTRPPQIMPTINRFFSQEK
        MG WM+PEVYPL+AAM FV SMCVFQLTRNVLLNPDVR+NK  R MGVLENEEEGEKYAEH LRRFLRTRPPQ+MP INRFF+Q+K
Subjt:  MGHWMKPEVYPLLAAMGFVTSMCVFQLTRNVLLNPDVRVNKAHRKMGVLENEEEGEKYAEHSLRRFLRTRPPQIMPTINRFFSQEK
A0A1S3CLU5 uncharacterized protein LOC1035024246.2e-3990.7Show/hide
Query:  MGHWMKPEVYPLLAAMGFVTSMCVFQLTRNVLLNPDVRVNKAHRKMGVLENEEEGEKYAEHSLRRFLRTRPPQIMPTINRFFSQEK
        MG WMKPEVYPLLAAMGFVTSMCVFQLTRN+L+NPDVRVNKAHR+MGVLENEEEGEKY+EHSLRRFLRTRPP+IMPTINR+FSQ+K
Subjt:  MGHWMKPEVYPLLAAMGFVTSMCVFQLTRNVLLNPDVRVNKAHRKMGVLENEEEGEKYAEHSLRRFLRTRPPQIMPTINRFFSQEK
A0A6J1DLE5 uncharacterized protein LOC1110222082.9e-3688.37Show/hide
Query:  MGHWMKPEVYPLLAAMGFVTSMCVFQLTRNVLLNPDVRVNKAHRKMGVLENEEEGEKYAEHSLRRFLRTRPPQIMPTINRFFSQEK
        MG WMKPEVYPLLAAMGFVTSMCVFQLTRN+LLNPDVRVNK  R MGVLEN EEGEKYAEH LRRFLRTRPP+IMPTIN FFSQ+K
Subjt:  MGHWMKPEVYPLLAAMGFVTSMCVFQLTRNVLLNPDVRVNKAHRKMGVLENEEEGEKYAEHSLRRFLRTRPPQIMPTINRFFSQEK
A0A6J1GXR5 uncharacterized protein LOC1114578082.2e-3684.88Show/hide
Query:  MGHWMKPEVYPLLAAMGFVTSMCVFQLTRNVLLNPDVRVNKAHRKMGVLENEEEGEKYAEHSLRRFLRTRPPQIMPTINRFFSQEK
        M  W+KPEVYPL+AAMGFVT++CVFQLTRN+L+NPDVRVNK HR+MGVLENEEEGEKYAEHSLRRFLRTRPP+IMP INRFFSQ+K
Subjt:  MGHWMKPEVYPLLAAMGFVTSMCVFQLTRNVLLNPDVRVNKAHRKMGVLENEEEGEKYAEHSLRRFLRTRPPQIMPTINRFFSQEK
A0A6J1IXF3 uncharacterized protein LOC1114800342.6e-3787.21Show/hide
Query:  MGHWMKPEVYPLLAAMGFVTSMCVFQLTRNVLLNPDVRVNKAHRKMGVLENEEEGEKYAEHSLRRFLRTRPPQIMPTINRFFSQEK
        M  W+KPEVYPL+AAMGFVT+MCVFQLTRN+L+NPDVRVNK HR+MGVLENEEEGEKYAEHSLRRFLRTRPP+IMPTINRFFSQ+K
Subjt:  MGHWMKPEVYPLLAAMGFVTSMCVFQLTRNVLLNPDVRVNKAHRKMGVLENEEEGEKYAEHSLRRFLRTRPPQIMPTINRFFSQEK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G29970.1 B12D protein5.4e-3574.12Show/hide
Query:  MGHWMKPEVYPLLAAMGFVTSMCVFQLTRNVLLNPDVRVNKAHRKMGVLENEEEGEKYAEHSLRRFLRTRPPQIMPTINRFFSQE
        MG W++PEVYPLL AMGFVTSM VFQLTRN  LNPD R+NK HRKMG+LEN++EGEKYA+H+ R++LRTR PQ+MP++NRFFSQE
Subjt:  MGHWMKPEVYPLLAAMGFVTSMCVFQLTRNVLLNPDVRVNKAHRKMGVLENEEEGEKYAEHSLRRFLRTRPPQIMPTINRFFSQE
AT3G48140.1 B12D protein1.3e-2051.25Show/hide
Query:  WMKPEVYPLLAAMGFVTSMCVFQLTRNVLLNPDVRVNKAHRKMGVLENEEEGEKYAEHSLRRFLRTRPPQIMPTINRFFS
        W++PEVYPL AA G    +C F L RN+  NP+VR  K +R  G+L+N  EGEKY E+ LR+F+R + P+IMP +N+FF+
Subjt:  WMKPEVYPLLAAMGFVTSMCVFQLTRNVLLNPDVRVNKAHRKMGVLENEEEGEKYAEHSLRRFLRTRPPQIMPTINRFFS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACATTGGATGAAACCAGAGGTTTATCCGCTACTGGCGGCCATGGGATTTGTGACATCTATGTGCGTATTTCAACTTACCAGAAACGTTCTCCTAAACCCTGACGT
CAGGGTGAACAAAGCGCACCGTAAAATGGGAGTGTTGGAGAACGAAGAGGAAGGGGAGAAGTATGCGGAGCACAGCCTCCGGCGGTTCCTCCGAACCCGGCCGCCCCAAA
TCATGCCTACTATTAATCGCTTTTTTTCTCAAGAAAAATAA
mRNA sequenceShow/hide mRNA sequence
TAAATTTGTTAATACTTCATTCAGAAATCAACTTTTCAATTTCCAAAGAAGCTCATTATCACTATCTTCTTAATGGGACATTGGATGAAACCAGAGGTTTATCCGCTACT
GGCGGCCATGGGATTTGTGACATCTATGTGCGTATTTCAACTTACCAGAAACGTTCTCCTAAACCCTGACGTCAGGGTGAACAAAGCGCACCGTAAAATGGGAGTGTTGG
AGAACGAAGAGGAAGGGGAGAAGTATGCGGAGCACAGCCTCCGGCGGTTCCTCCGAACCCGGCCGCCCCAAATCATGCCTACTATTAATCGCTTTTTTTCTCAAGAAAAA
TAATTTTTTCAAATTAACATATACTCTCTACTTTGTCTCGC
Protein sequenceShow/hide protein sequence
MGHWMKPEVYPLLAAMGFVTSMCVFQLTRNVLLNPDVRVNKAHRKMGVLENEEEGEKYAEHSLRRFLRTRPPQIMPTINRFFSQEK