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Tan0010593 (gene) of Snake gourd v1 genome

Gene IDTan0010593
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionmalonate--CoA ligase
Genome locationLG06:59527343..59528475
RNA-Seq ExpressionTan0010593
SyntenyTan0010593
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0009698 - phenylpropanoid metabolic process (biological process)
GO:0090410 - malonate catabolic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005739 - mitochondrion (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0016207 - 4-coumarate-CoA ligase activity (molecular function)
GO:0031956 - medium-chain fatty acid-CoA ligase activity (molecular function)
GO:0090409 - malonyl-CoA synthetase activity (molecular function)
InterPro domainsIPR000873 - AMP-dependent synthetase/ligase
IPR042099 - ANL, N-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650164.1 hypothetical protein Csa_011711 [Cucumis sativus]4.7e-3076.83Show/hide
Query:  MCDSSALPPPVMQKWKDITGHQLLERYGMTEFAMAISNTLNGKRKVGTVGKCLFPGVEAKMVTDDGNTNDVTLEGELCVRSP
        MC SSALPPP+M++WK++TGH+LLERYGMTEF MAISN LNG+RK+GTVGK  FPGVEAK+V DDG+TND +LEGELC+RSP
Subjt:  MCDSSALPPPVMQKWKDITGHQLLERYGMTEFAMAISNTLNGKRKVGTVGKCLFPGVEAKMVTDDGNTNDVTLEGELCVRSP

KAG6593469.1 Malonate--CoA ligase, partial [Cucurbita argyrosperma subsp. sororia]2.3e-2976.83Show/hide
Query:  MCDSSALPPPVMQKWKDITGHQLLERYGMTEFAMAISNTLNGKRKVGTVGKCLFPGVEAKMVTDDGNTNDVTLEGELCVRSP
        MC SSALPPP+M++WK +TGHQLLERYGMTEF MAISN LNG+RK+GTVGK L PGVEAK+V+DDG+ ND  LEGELC+RSP
Subjt:  MCDSSALPPPVMQKWKDITGHQLLERYGMTEFAMAISNTLNGKRKVGTVGKCLFPGVEAKMVTDDGNTNDVTLEGELCVRSP

XP_004149301.1 malonate--CoA ligase [Cucumis sativus]4.7e-3076.83Show/hide
Query:  MCDSSALPPPVMQKWKDITGHQLLERYGMTEFAMAISNTLNGKRKVGTVGKCLFPGVEAKMVTDDGNTNDVTLEGELCVRSP
        MC SSALPPP+M++WK++TGH+LLERYGMTEF MAISN LNG+RK+GTVGK  FPGVEAK+V DDG+TND +LEGELC+RSP
Subjt:  MCDSSALPPPVMQKWKDITGHQLLERYGMTEFAMAISNTLNGKRKVGTVGKCLFPGVEAKMVTDDGNTNDVTLEGELCVRSP

XP_038904615.1 malonate--CoA ligase isoform X1 [Benincasa hispida]4.7e-3076.83Show/hide
Query:  MCDSSALPPPVMQKWKDITGHQLLERYGMTEFAMAISNTLNGKRKVGTVGKCLFPGVEAKMVTDDGNTNDVTLEGELCVRSP
        MC SSALPPP+M++WK++TGH+LLERYGMTEF MAISN LNG+RK+GTVGK  FPGVEAK+V DDG+TND +LEGELC+RSP
Subjt:  MCDSSALPPPVMQKWKDITGHQLLERYGMTEFAMAISNTLNGKRKVGTVGKCLFPGVEAKMVTDDGNTNDVTLEGELCVRSP

XP_038904616.1 malonate--CoA ligase isoform X2 [Benincasa hispida]4.7e-3076.83Show/hide
Query:  MCDSSALPPPVMQKWKDITGHQLLERYGMTEFAMAISNTLNGKRKVGTVGKCLFPGVEAKMVTDDGNTNDVTLEGELCVRSP
        MC SSALPPP+M++WK++TGH+LLERYGMTEF MAISN LNG+RK+GTVGK  FPGVEAK+V DDG+TND +LEGELC+RSP
Subjt:  MCDSSALPPPVMQKWKDITGHQLLERYGMTEFAMAISNTLNGKRKVGTVGKCLFPGVEAKMVTDDGNTNDVTLEGELCVRSP

TrEMBL top hitse value%identityAlignment
A0A0A0L7U7 Uncharacterized protein2.3e-3076.83Show/hide
Query:  MCDSSALPPPVMQKWKDITGHQLLERYGMTEFAMAISNTLNGKRKVGTVGKCLFPGVEAKMVTDDGNTNDVTLEGELCVRSP
        MC SSALPPP+M++WK++TGH+LLERYGMTEF MAISN LNG+RK+GTVGK  FPGVEAK+V DDG+TND +LEGELC+RSP
Subjt:  MCDSSALPPPVMQKWKDITGHQLLERYGMTEFAMAISNTLNGKRKVGTVGKCLFPGVEAKMVTDDGNTNDVTLEGELCVRSP

A0A1S3BUN8 malonate--CoA ligase isoform X11.6e-2873.17Show/hide
Query:  MCDSSALPPPVMQKWKDITGHQLLERYGMTEFAMAISNTLNGKRKVGTVGKCLFPGVEAKMVTDDGNTNDVTLEGELCVRSP
        MC SSALPPP+M++W+++TGH+LLERYGMTEF MAISN LNG+RK+GTVGK  FPGVEAK+V DDG+T   +LEGELC+RSP
Subjt:  MCDSSALPPPVMQKWKDITGHQLLERYGMTEFAMAISNTLNGKRKVGTVGKCLFPGVEAKMVTDDGNTNDVTLEGELCVRSP

A0A5D3BWC7 Malonate--CoA ligase isoform X11.6e-2873.17Show/hide
Query:  MCDSSALPPPVMQKWKDITGHQLLERYGMTEFAMAISNTLNGKRKVGTVGKCLFPGVEAKMVTDDGNTNDVTLEGELCVRSP
        MC SSALPPP+M++W+++TGH+LLERYGMTEF MAISN LNG+RK+GTVGK  FPGVEAK+V DDG+T   +LEGELC+RSP
Subjt:  MCDSSALPPPVMQKWKDITGHQLLERYGMTEFAMAISNTLNGKRKVGTVGKCLFPGVEAKMVTDDGNTNDVTLEGELCVRSP

A0A6J1HKE3 malonate--CoA ligase1.1e-2976.83Show/hide
Query:  MCDSSALPPPVMQKWKDITGHQLLERYGMTEFAMAISNTLNGKRKVGTVGKCLFPGVEAKMVTDDGNTNDVTLEGELCVRSP
        MC SSALPPP+M++WK +TGHQLLERYGMTEF MAISN LNG+RK+GTVGK L PGVEAK+V+DDG+ ND  LEGELC+RSP
Subjt:  MCDSSALPPPVMQKWKDITGHQLLERYGMTEFAMAISNTLNGKRKVGTVGKCLFPGVEAKMVTDDGNTNDVTLEGELCVRSP

A0A6J1KFM3 malonate--CoA ligase9.5e-2975.61Show/hide
Query:  MCDSSALPPPVMQKWKDITGHQLLERYGMTEFAMAISNTLNGKRKVGTVGKCLFPGVEAKMVTDDGNTNDVTLEGELCVRSP
        MC SSALP P+M++WK +TGHQLLERYGMTEF MAISN LNG+RK+GTVGK L PGVEAK+V+DDG+ ND  LEGELC+RSP
Subjt:  MCDSSALPPPVMQKWKDITGHQLLERYGMTEFAMAISNTLNGKRKVGTVGKCLFPGVEAKMVTDDGNTNDVTLEGELCVRSP

SwissProt top hitse value%identityAlignment
M4IS90 Probable CoA ligase CCL81.5e-2670.73Show/hide
Query:  MCDSSALPPPVMQKWKDITGHQLLERYGMTEFAMAISNTLNGKRKVGTVGKCLFPGVEAKMVTDDGNTNDVTLEGELCVRSP
        MC SSALP PVMQ+W+ ITGH+LLERYGMTEF MAISN L G+RK GTVGK  FPGVE ++V +D N +D T  GELCVRSP
Subjt:  MCDSSALPPPVMQKWKDITGHQLLERYGMTEFAMAISNTLNGKRKVGTVGKCLFPGVEAKMVTDDGNTNDVTLEGELCVRSP

Q3URE1 Malonate--CoA ligase ACSF3, mitochondrial5.4e-1342.86Show/hide
Query:  SSALPPPVMQKWKDITGHQLLERYGMTEFAMAISNTLNGKRKVGTVGKCLFPGVEAKMVTD------------DGNTNDVTL-------EGELCVRSP
        S+ALP P+++KW+  TGH LLERYGMTE  MA+SN L   R  G+VG  L PGVE +++++            +GN     +       EGEL VR P
Subjt:  SSALPPPVMQKWKDITGHQLLERYGMTEFAMAISNTLNGKRKVGTVGKCLFPGVEAKMVTD------------DGNTNDVTL-------EGELCVRSP

Q58DN7 Malonate--CoA ligase ACSF3, mitochondrial1.4e-1359.68Show/hide
Query:  SSALPPPVMQKWKDITGHQLLERYGMTEFAMAISNTLNGKRKVGTVGKCLFPGVEAKMVTDD
        S+ALP PV++KWK ITGH LLERYGMTE  MA+SN L   R  G+VG  L PGVE ++V+++
Subjt:  SSALPPPVMQKWKDITGHQLLERYGMTEFAMAISNTLNGKRKVGTVGKCLFPGVEAKMVTDD

Q6GLK6 Malonate--CoA ligase ACSF3, mitochondrial6.4e-1459.68Show/hide
Query:  SSALPPPVMQKWKDITGHQLLERYGMTEFAMAISNTLNGKRKVGTVGKCLFPGVEAKMVTDD
        SSALP PV+++W++ITGH LLERYGMTE  MA++N L+G R  G VG  L PGVE + VT +
Subjt:  SSALPPPVMQKWKDITGHQLLERYGMTEFAMAISNTLNGKRKVGTVGKCLFPGVEAKMVTDD

Q8H151 Malonate--CoA ligase1.4e-2163.41Show/hide
Query:  MCDSSALPPPVMQKWKDITGHQLLERYGMTEFAMAISNTLNGKRKVGTVGKCLFPGVEAKMVTDDGNTNDVTLEGELCVRSP
        M  SSALP PVM +W+ ITGH+LLERYGMTEF MA+SN L G R  GTVGK L PGVEAK+  D+ + N V   GE+CV+SP
Subjt:  MCDSSALPPPVMQKWKDITGHQLLERYGMTEFAMAISNTLNGKRKVGTVGKCLFPGVEAKMVTDDGNTNDVTLEGELCVRSP

Arabidopsis top hitse value%identityAlignment
AT3G16170.1 AMP-dependent synthetase and ligase family protein1.0e-2263.41Show/hide
Query:  MCDSSALPPPVMQKWKDITGHQLLERYGMTEFAMAISNTLNGKRKVGTVGKCLFPGVEAKMVTDDGNTNDVTLEGELCVRSP
        M  SSALP PVM +W+ ITGH+LLERYGMTEF MA+SN L G R  GTVGK L PGVEAK+  D+ + N V   GE+CV+SP
Subjt:  MCDSSALPPPVMQKWKDITGHQLLERYGMTEFAMAISNTLNGKRKVGTVGKCLFPGVEAKMVTDDGNTNDVTLEGELCVRSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCGACTCTTCTGCACTCCCTCCTCCTGTCATGCAGAAATGGAAGGATATAACTGGACACCAACTTCTGGAACGATATGGTATGACTGAATTTGCCATGGCAATTTC
AAATACTTTAAATGGTAAGAGAAAGGTTGGAACTGTTGGCAAATGTCTCTTCCCTGGCGTGGAGGCCAAGATGGTTACAGATGACGGGAATACTAATGATGTGACTTTGG
AGGGCGAGCTATGCGTTAGAAGTCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGCGACTCTTCTGCACTCCCTCCTCCTGTCATGCAGAAATGGAAGGATATAACTGGACACCAACTTCTGGAACGATATGGTATGACTGAATTTGCCATGGCAATTTC
AAATACTTTAAATGGTAAGAGAAAGGTTGGAACTGTTGGCAAATGTCTCTTCCCTGGCGTGGAGGCCAAGATGGTTACAGATGACGGGAATACTAATGATGTGACTTTGG
AGGGCGAGCTATGCGTTAGAAGTCCTTAA
Protein sequenceShow/hide protein sequence
MCDSSALPPPVMQKWKDITGHQLLERYGMTEFAMAISNTLNGKRKVGTVGKCLFPGVEAKMVTDDGNTNDVTLEGELCVRSP