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Tan0010608 (gene) of Snake gourd v1 genome

Gene IDTan0010608
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG08:71932556..71933031
RNA-Seq ExpressionTan0010608
SyntenyTan0010608
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044076.1 hypothetical protein E6C27_scaffold236G004240 [Cucumis melo var. makuwa]2.8e-1875.95Show/hide
Query:  MSQRQGRHQRRPSQGVFMAADYLSEPPSS--VGPTSVVESAGPHS---SRPPQQSRTADPSAARPPAPAASNEAPNPAS
        MSQR GRHQRRPSQGVFMAADYLSEPP    +GP S VES GPHS   +RPPQQSR ADP A RPPAPAA+N+A NPAS
Subjt:  MSQRQGRHQRRPSQGVFMAADYLSEPPSS--VGPTSVVESAGPHS---SRPPQQSRTADPSAARPPAPAASNEAPNPAS

KAG6580559.1 hypothetical protein SDJN03_20561, partial [Cucurbita argyrosperma subsp. sororia]3.0e-2077.92Show/hide
Query:  MSQRQGRHQRRPSQGVFMAADYLSEPPSSVGPTSVVESAGPHSS---RPPQQSRTADPSAARPPAPAASNEAPNPAS
        MSQRQGRHQRRPSQ VF+AADYLSEPP + GP S VE AGPHS+   RPPQQSR ADP+A RPPAPAASNEAPNP +
Subjt:  MSQRQGRHQRRPSQGVFMAADYLSEPPSSVGPTSVVESAGPHSS---RPPQQSRTADPSAARPPAPAASNEAPNPAS

KAG6596419.1 hypothetical protein SDJN03_09599, partial [Cucurbita argyrosperma subsp. sororia]8.2e-1876.62Show/hide
Query:  MSQRQGRHQRRPSQGVFMAADYLSEPPSSVGPTSVVESAGPHS---SRPPQQSRTADPSAARPPAPAASNEAPNPAS
        MSQR GRHQRRPSQGVFM ADYLSEPP   GP   VES  P S   SRPP QSR ADP AARPPAPA SNEAPNPAS
Subjt:  MSQRQGRHQRRPSQGVFMAADYLSEPPSSVGPTSVVESAGPHS---SRPPQQSRTADPSAARPPAPAASNEAPNPAS

KGN58888.1 hypothetical protein Csa_002334 [Cucumis sativus]3.1e-1773.75Show/hide
Query:  MSQRQGRHQRRPSQGVFMAADYLSEPPSSVGPTSVVESAGPHSS----RPPQQSRTADPSAARPPAP--AASNEAPNPAS
        MSQR  RHQRRPSQGVFM ADYLS+PP  VGP S VES GPHSS    RP QQSR+ADP AARPPAP   A+N+APNPAS
Subjt:  MSQRQGRHQRRPSQGVFMAADYLSEPPSSVGPTSVVESAGPHSS----RPPQQSRTADPSAARPPAP--AASNEAPNPAS

TrEMBL top hitse value%identityAlignment
A0A0A0LAM0 Uncharacterized protein1.5e-1773.75Show/hide
Query:  MSQRQGRHQRRPSQGVFMAADYLSEPPSSVGPTSVVESAGPHSS----RPPQQSRTADPSAARPPAP--AASNEAPNPAS
        MSQR  RHQRRPSQGVFM ADYLS+PP  VGP S VES GPHSS    RP QQSR+ADP AARPPAP   A+N+APNPAS
Subjt:  MSQRQGRHQRRPSQGVFMAADYLSEPPSSVGPTSVVESAGPHSS----RPPQQSRTADPSAARPPAP--AASNEAPNPAS

A0A5A7TPQ1 Uncharacterized protein1.4e-1875.95Show/hide
Query:  MSQRQGRHQRRPSQGVFMAADYLSEPPSS--VGPTSVVESAGPHS---SRPPQQSRTADPSAARPPAPAASNEAPNPAS
        MSQR GRHQRRPSQGVFMAADYLSEPP    +GP S VES GPHS   +RPPQQSR ADP A RPPAPAA+N+A NPAS
Subjt:  MSQRQGRHQRRPSQGVFMAADYLSEPPSS--VGPTSVVESAGPHS---SRPPQQSRTADPSAARPPAPAASNEAPNPAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCCAGCGACAGGGCAGGCACCAGAGGAGGCCTTCGCAGGGCGTTTTCATGGCCGCCGATTACCTCTCTGAACCGCCTTCCTCGGTCGGACCGACCTCGGTGGTTGA
ATCCGCCGGTCCCCACTCGTCTCGTCCGCCGCAGCAGAGCCGTACCGCTGATCCGTCGGCGGCAAGGCCTCCTGCCCCGGCGGCGTCGAATGAAGCTCCGAATCCGGCGA
GCTAG
mRNA sequenceShow/hide mRNA sequence
CCTGTTTCTCTTTCTCTGTTTCCCCCCTTCTTCACCATTCCCAAATCCACACTCTCAATTCTCAAATCTCCGCCGGAAAATGTCCCAGCGACAGGGCAGGCACCAGAGGA
GGCCTTCGCAGGGCGTTTTCATGGCCGCCGATTACCTCTCTGAACCGCCTTCCTCGGTCGGACCGACCTCGGTGGTTGAATCCGCCGGTCCCCACTCGTCTCGTCCGCCG
CAGCAGAGCCGTACCGCTGATCCGTCGGCGGCAAGGCCTCCTGCCCCGGCGGCGTCGAATGAAGCTCCGAATCCGGCGAGCTAGCGGACCTAACGCAGTGATTCGACGCG
TCGTTTTGTTCGATCGGAAGATGAAGATGAAGATGAAGTATGTTTTGTTTTCGATCTGTCGTTTCGTTTTATCGTTTTTCTTTTTTTTTTGTAAGATTTGATTTTATCGT
TTTTCTTATCTCACAGAAATTGTGGGGAAATTTGCA
Protein sequenceShow/hide protein sequence
MSQRQGRHQRRPSQGVFMAADYLSEPPSSVGPTSVVESAGPHSSRPPQQSRTADPSAARPPAPAASNEAPNPAS