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Tan0010618 (gene) of Snake gourd v1 genome

Gene IDTan0010618
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionZinc finger CCCH domain-containing protein 11-like
Genome locationLG03:66621961..66623708
RNA-Seq ExpressionTan0010618
SyntenyTan0010618
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0005829 - cytosol (cellular component)
InterPro domainsIPR032378 - ZC3H15/TMA46 family, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE9465222.1 hypothetical protein C3L33_02870, partial [Rhododendron williamsianum]8.1e-1551.85Show/hide
Query:  GSAQAHEGLQVLLGRCGEVTILLVLEEEAEKISIEEGIENQRAKLTKATLTLMTPSLFMQWKKEKLVEREAGFAAQMA--AWSDRLSLFVEDVEARDSYK
        GS + H    +  G   +  +  +LEEEAEKI IEE IENQRAK+T  T T MTP LF QWK +K+ E+EAG AAQ A  A +DRLSLFV+D EA + Y 
Subjt:  GSAQAHEGLQVLLGRCGEVTILLVLEEEAEKISIEEGIENQRAKLTKATLTLMTPSLFMQWKKEKLVEREAGFAAQMA--AWSDRLSLFVEDVEARDSYK

Query:  ESRTPMIT
            P  T
Subjt:  ESRTPMIT
KAG5557941.1 hypothetical protein RHGRI_008002 [Rhododendron griersonianum]1.4e-1451.85Show/hide
Query:  GSAQAHEGLQVLLGRCGEVTILLVLEEEAEKISIEEGIENQRAKLTKATLTLMTPSLFMQWKKEKLVEREAGFAAQMA--AWSDRLSLFVEDVEARDSYK
        GS + H    +  G   +  +  +LEEEAEKI IEE IENQRAK+T  T T MTP LF QWK +K+ E+EAG AAQ A  A +DRLSLFV+D EA + Y 
Subjt:  GSAQAHEGLQVLLGRCGEVTILLVLEEEAEKISIEEGIENQRAKLTKATLTLMTPSLFMQWKKEKLVEREAGFAAQMA--AWSDRLSLFVEDVEARDSYK

Query:  ESRTPMIT
            P  T
Subjt:  ESRTPMIT
PQP92987.1 zinc finger CCCH domain-containing protein 11-like [Prunus yedoensis var. nudiflora]6.2e-1557.45Show/hide
Query:  VLEEEAEKISIEEGIENQRAKLTKATLTLMTPSLFMQWKKEKLVEREAGFAAQMA--AWSDRL----------SLFVEDVEARDSYKESRTPMI
        +LEEEAEKI IEE IENQRAK+T  T T MTP LFMQWKK+K+ ER+AG AAQMA  A +DR+          SLFV+DVEA + Y+  + P +
Subjt:  VLEEEAEKISIEEGIENQRAKLTKATLTLMTPSLFMQWKKEKLVEREAGFAAQMA--AWSDRL----------SLFVEDVEARDSYKESRTPMI
PQQ09951.1 zinc finger CCCH domain-containing protein 11 [Prunus yedoensis var. nudiflora]6.2e-1557.45Show/hide
Query:  VLEEEAEKISIEEGIENQRAKLTKATLTLMTPSLFMQWKKEKLVEREAGFAAQMA--AWSDRL----------SLFVEDVEARDSYKESRTPMI
        +LEEEAEKI IEE IENQRAK+T  T T MTP LFMQWKK+K+ ER+AG AAQMA  A +DR+          SLFV+DVEA + Y+  + P +
Subjt:  VLEEEAEKISIEEGIENQRAKLTKATLTLMTPSLFMQWKKEKLVEREAGFAAQMA--AWSDRL----------SLFVEDVEARDSYKESRTPMI
XP_021800197.1 zinc finger CCCH domain-containing protein 21-like isoform X1 [Prunus avium]6.2e-1557.45Show/hide
Query:  VLEEEAEKISIEEGIENQRAKLTKATLTLMTPSLFMQWKKEKLVEREAGFAAQMA--AWSDRL----------SLFVEDVEARDSYKESRTPMI
        +LEEEAEKI IEE IENQRAK+T  T T MTP LFMQWKK+K+ ER+AG AAQMA  A +DR+          SLFV+DVEA + Y+  + P +
Subjt:  VLEEEAEKISIEEGIENQRAKLTKATLTLMTPSLFMQWKKEKLVEREAGFAAQMA--AWSDRL----------SLFVEDVEARDSYKESRTPMI
TrEMBL top hitse value%identityAlignment
A0A314XPV8 Zinc finger CCCH domain-containing protein 11-like3.0e-1557.45Show/hide
Query:  VLEEEAEKISIEEGIENQRAKLTKATLTLMTPSLFMQWKKEKLVEREAGFAAQMA--AWSDRL----------SLFVEDVEARDSYKESRTPMI
        +LEEEAEKI IEE IENQRAK+T  T T MTP LFMQWKK+K+ ER+AG AAQMA  A +DR+          SLFV+DVEA + Y+  + P +
Subjt:  VLEEEAEKISIEEGIENQRAKLTKATLTLMTPSLFMQWKKEKLVEREAGFAAQMA--AWSDRL----------SLFVEDVEARDSYKESRTPMI
A0A314YYW3 Zinc finger CCCH domain-containing protein 113.0e-1557.45Show/hide
Query:  VLEEEAEKISIEEGIENQRAKLTKATLTLMTPSLFMQWKKEKLVEREAGFAAQMA--AWSDRL----------SLFVEDVEARDSYKESRTPMI
        +LEEEAEKI IEE IENQRAK+T  T T MTP LFMQWKK+K+ ER+AG AAQMA  A +DR+          SLFV+DVEA + Y+  + P +
Subjt:  VLEEEAEKISIEEGIENQRAKLTKATLTLMTPSLFMQWKKEKLVEREAGFAAQMA--AWSDRL----------SLFVEDVEARDSYKESRTPMI
A0A6A4M756 Uncharacterized protein (Fragment)3.9e-1551.85Show/hide
Query:  GSAQAHEGLQVLLGRCGEVTILLVLEEEAEKISIEEGIENQRAKLTKATLTLMTPSLFMQWKKEKLVEREAGFAAQMA--AWSDRLSLFVEDVEARDSYK
        GS + H    +  G   +  +  +LEEEAEKI IEE IENQRAK+T  T T MTP LF QWK +K+ E+EAG AAQ A  A +DRLSLFV+D EA + Y 
Subjt:  GSAQAHEGLQVLLGRCGEVTILLVLEEEAEKISIEEGIENQRAKLTKATLTLMTPSLFMQWKKEKLVEREAGFAAQMA--AWSDRLSLFVEDVEARDSYK

Query:  ESRTPMIT
            P  T
Subjt:  ESRTPMIT
A0A6J5XM69 Uncharacterized protein1.1e-1457.45Show/hide
Query:  VLEEEAEKISIEEGIENQRAKLTKATLTLMTPSLFMQWKKEKLVEREAGFAAQMA--AWSDRL----------SLFVEDVEARDSYKESRTPMI
        +LEEEAEKI IEE IENQRAK+T  T T MT  LFMQWKK+K+ ER+AG AAQMA  A +DR+          SLFV+DVEA + YK  + P +
Subjt:  VLEEEAEKISIEEGIENQRAKLTKATLTLMTPSLFMQWKKEKLVEREAGFAAQMA--AWSDRL----------SLFVEDVEARDSYKESRTPMI
A0A6P5REB8 zinc finger CCCH domain-containing protein 21-like isoform X13.0e-1557.45Show/hide
Query:  VLEEEAEKISIEEGIENQRAKLTKATLTLMTPSLFMQWKKEKLVEREAGFAAQMA--AWSDRL----------SLFVEDVEARDSYKESRTPMI
        +LEEEAEKI IEE IENQRAK+T  T T MTP LFMQWKK+K+ ER+AG AAQMA  A +DR+          SLFV+DVEA + Y+  + P +
Subjt:  VLEEEAEKISIEEGIENQRAKLTKATLTLMTPSLFMQWKKEKLVEREAGFAAQMA--AWSDRL----------SLFVEDVEARDSYKESRTPMI
SwissProt top hitse value%identityAlignment
Q0JHZ2 Zinc finger CCCH domain-containing protein 112.2e-1049.43Show/hide
Query:  VLEEEAEKISIEEGIENQRAKLTKATLTLMTPSLFMQWKKEKLVEREAGFAAQMA--AWSDRL----------SLFVEDVEARDSYK
        +LEEE+EKI+IE+ IE+QR K+   T T MT  LFM+WK++K  EREAG AA  A  A +DR+          S+FV+D EA D Y+
Subjt:  VLEEEAEKISIEEGIENQRAKLTKATLTLMTPSLFMQWKKEKLVEREAGFAAQMA--AWSDRL----------SLFVEDVEARDSYK
Q9SK74 Zinc finger CCCH domain-containing protein 213.0e-1246.15Show/hide
Query:  LVLEEEAEKISIEEGIENQRAKLTKATLTLMTPSLFMQWKKEKLVEREAGFAAQMA--AWSDRL----------SLFVEDVEARDSYKESR
        L+ EE ++K+++E+ IEN+RAKL   T T MTP+LFM+WK++K+ ER+AG AA  A  A +DR+          SLFV+D EA + Y+  R
Subjt:  LVLEEEAEKISIEEGIENQRAKLTKATLTLMTPSLFMQWKKEKLVEREAGFAAQMA--AWSDRL----------SLFVEDVEARDSYKESR
Arabidopsis top hitse value%identityAlignment
AT2G20280.1 Zinc finger C-x8-C-x5-C-x3-H type family protein2.1e-1346.15Show/hide
Query:  LVLEEEAEKISIEEGIENQRAKLTKATLTLMTPSLFMQWKKEKLVEREAGFAAQMA--AWSDRL----------SLFVEDVEARDSYKESR
        L+ EE ++K+++E+ IEN+RAKL   T T MTP+LFM+WK++K+ ER+AG AA  A  A +DR+          SLFV+D EA + Y+  R
Subjt:  LVLEEEAEKISIEEGIENQRAKLTKATLTLMTPSLFMQWKKEKLVEREAGFAAQMA--AWSDRL----------SLFVEDVEARDSYKESR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAAGATCGTAGAGGAGAAGACCTTCCGGCTCAAGAATCAAGAACAAGAGCAAAAATCTGGAGAAGTATGTTCAGAGCCTCGAGCAATTGGTTCAGCTCAAGCCCA
CGAAGGTTTGCAAGTACTTCTTGGACGATGTGGAGAAGTAACAATATTGTTGGTTTTGGAGGAGGAGGCTGAAAAGATATCTATTGAGGAGGGAATAGAAAATCAGCGTG
CCAAGTTGACTAAAGCGACATTGACCCTTATGACTCCTAGCTTATTCATGCAATGGAAGAAGGAAAAGTTGGTTGAAAGAGAAGCTGGTTTTGCTGCACAAATGGCAGCC
TGGAGTGATCGTCTGAGCCTTTTTGTTGAGGATGTTGAAGCACGTGACAGTTATAAAGAGAGCAGGACTCCGATGATAACAGTCGTAATGCTTGGCATTCGCATATTAGT
TTCAATTCTTTTGCCTAAAGCTATGAAGTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGAAGATCGTAGAGGAGAAGACCTTCCGGCTCAAGAATCAAGAACAAGAGCAAAAATCTGGAGAAGTATGTTCAGAGCCTCGAGCAATTGGTTCAGCTCAAGCCCA
CGAAGGTTTGCAAGTACTTCTTGGACGATGTGGAGAAGTAACAATATTGTTGGTTTTGGAGGAGGAGGCTGAAAAGATATCTATTGAGGAGGGAATAGAAAATCAGCGTG
CCAAGTTGACTAAAGCGACATTGACCCTTATGACTCCTAGCTTATTCATGCAATGGAAGAAGGAAAAGTTGGTTGAAAGAGAAGCTGGTTTTGCTGCACAAATGGCAGCC
TGGAGTGATCGTCTGAGCCTTTTTGTTGAGGATGTTGAAGCACGTGACAGTTATAAAGAGAGCAGGACTCCGATGATAACAGTCGTAATGCTTGGCATTCGCATATTAGT
TTCAATTCTTTTGCCTAAAGCTATGAAGTATTAA
Protein sequenceShow/hide protein sequence
MQKIVEEKTFRLKNQEQEQKSGEVCSEPRAIGSAQAHEGLQVLLGRCGEVTILLVLEEEAEKISIEEGIENQRAKLTKATLTLMTPSLFMQWKKEKLVEREAGFAAQMAA
WSDRLSLFVEDVEARDSYKESRTPMITVVMLGIRILVSILLPKAMKY