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Tan0010636 (gene) of Snake gourd v1 genome

Gene IDTan0010636
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGlycine-rich protein family
Genome locationLG09:4618166..4619812
RNA-Seq ExpressionTan0010636
SyntenyTan0010636
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008450550.1 PREDICTED: uncharacterized protein LOC103492117 [Cucumis melo]2.2e-6376.54Show/hide
Query:  MASPISFLFIVIVLALAVLLHCPSV-CSEEIQGQVVTEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLNDAFENFLFY
        MASPISFL   +VLAL V L CPSV   +EI GQ+V E+FKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQL+LNCL+++F NFLFY
Subjt:  MASPISFLFIVIVLALAVLLHCPSV-CSEEIQGQVVTEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLNDAFENFLFY

Query:  NQATVQNVQNALRFGCSYSSQRGNFNPGLFMQGEINKAHSFQKWFTLYNIVLFLVGCCFFIL
        N+AT Q+V+NALR GCS+SSQRGNFN GLFMQGE++KAH+FQ+WF L+   L LVGCCF IL
Subjt:  NQATVQNVQNALRFGCSYSSQRGNFNPGLFMQGEINKAHSFQKWFTLYNIVLFLVGCCFFIL

XP_022158829.1 uncharacterized protein LOC111025289 [Momordica charantia]9.7e-6481.05Show/hide
Query:  FIVIVLALAVLLHCPSVCSEEIQGQVVTEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLNDAFENFLFYNQATVQNVQ
        F+ I+LALAV L  PSVC+EEI GQVVTEA +CFDNKFIYNGC+S YRLNPSGSFNVPPEATNLFC+GPCL+ET+LVL+CL+DAF NFLFYN+A  QNV+
Subjt:  FIVIVLALAVLLHCPSVCSEEIQGQVVTEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLNDAFENFLFYNQATVQNVQ

Query:  NALRFGCSYSSQRGNFNPGLFMQGEINKAHSFQKWFTLYNIVLFLVGCCFFIL
        NALR GCSYSSQRGNFNPGLFMQGEI+KAHSFQKW T Y I+L LVGCCFFIL
Subjt:  NALRFGCSYSSQRGNFNPGLFMQGEINKAHSFQKWFTLYNIVLFLVGCCFFIL

XP_022989485.1 uncharacterized protein LOC111486529 [Cucurbita maxima]2.1e-5871.25Show/hide
Query:  MASPISFLFIVIVLALAVLLHCPSVCSEEIQGQVVTEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLNDAFENFLFYN
        MASP+  L ++ + ALA  L+C SVC EE +GQ VT+ F+CFDN  IYNGCESAYRLNPSG+ NVP +ATNLFCNGPCLIETQL+LNCL+ AF+NFLFYN
Subjt:  MASPISFLFIVIVLALAVLLHCPSVCSEEIQGQVVTEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLNDAFENFLFYN

Query:  QATVQNVQNALRFGCSYSSQRGNFNPGLFMQGEINKAHSFQKWFTLYNIVLFLVGCCFFI
        +ATV  VQNALR GCSYS+QRGNFNPG FMQGEI+K H+ QKW TLY  VLFL+GCCF +
Subjt:  QATVQNVQNALRFGCSYSSQRGNFNPGLFMQGEINKAHSFQKWFTLYNIVLFLVGCCFFI

XP_023529219.1 uncharacterized protein LOC111792117 [Cucurbita pepo subsp. pepo]1.0e-5770.99Show/hide
Query:  MASPISFLFIVIVLALAVLLHCPSVCSEEIQGQVVTEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLNDAFENFLFYN
        MASP+  L       L + L+C SVC EE++GQ VT+AF+CFDN  IYNGCESAYRLNP+G+ NVP EATNLFCNGPCLIETQL+LNCL+ AF NFLFYN
Subjt:  MASPISFLFIVIVLALAVLLHCPSVCSEEIQGQVVTEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLNDAFENFLFYN

Query:  QATVQNVQNALRFGCSYSSQRGNFNPGLFMQGEINKAH-SFQKWFTLYNIVLFLVGCCFFIL
        +ATV  VQNALR GCSYS+QRGNFNPG FMQGEI+K H + QKW TLY  V+FL+GCCFFIL
Subjt:  QATVQNVQNALRFGCSYSSQRGNFNPGLFMQGEINKAH-SFQKWFTLYNIVLFLVGCCFFIL

XP_031736077.1 uncharacterized protein LOC101204762 [Cucumis sativus]2.0e-6477.3Show/hide
Query:  MASPISFLFIVIVLALAVLLHCPSVCS--EEIQGQVVTEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLNDAFENFLF
        MASPISFL   I LALAVLL CPSV S  +EI GQ+V E FKCFDNKFIYNGCE AYRLNPSGSFNVPPEATNLFCNGPCLIETQL+LNCL++ F+NFLF
Subjt:  MASPISFLFIVIVLALAVLLHCPSVCS--EEIQGQVVTEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLNDAFENFLF

Query:  YNQATVQNVQNALRFGCSYSSQRGNFNPGLFMQGEINKAHSFQKWFTLYNIVLFLVGCCFFIL
        YN+AT Q+V+NALR GCSYSSQRGNFN GLFMQGE ++AH+FQKWF L+  +LFLVGCC F++
Subjt:  YNQATVQNVQNALRFGCSYSSQRGNFNPGLFMQGEINKAHSFQKWFTLYNIVLFLVGCCFFIL

TrEMBL top hitse value%identityAlignment
A0A0A0LYD5 Uncharacterized protein1.5e-6274.12Show/hide
Query:  MASPISFLFIVIVLALAVLLHCPS----VCSE-----EIQGQVVTEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLND
        MASPISFL   I LALAVLL CPS    V  E     EI GQ+V E FKCFDNKFIYNGCE AYRLNPSGSFNVPPEATNLFCNGPCLIETQL+LNCL++
Subjt:  MASPISFLFIVIVLALAVLLHCPS----VCSE-----EIQGQVVTEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLND

Query:  AFENFLFYNQATVQNVQNALRFGCSYSSQRGNFNPGLFMQGEINKAHSFQKWFTLYNIVLFLVGCCFFIL
         F+NFLFYN+AT Q+V+NALR GCSYSSQRGNFN GLFMQGE ++AH+FQKWF L+  +LFLVGCC F++
Subjt:  AFENFLFYNQATVQNVQNALRFGCSYSSQRGNFNPGLFMQGEINKAHSFQKWFTLYNIVLFLVGCCFFIL

A0A1S3BPH6 uncharacterized protein LOC1034921171.0e-6376.54Show/hide
Query:  MASPISFLFIVIVLALAVLLHCPSV-CSEEIQGQVVTEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLNDAFENFLFY
        MASPISFL   +VLAL V L CPSV   +EI GQ+V E+FKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQL+LNCL+++F NFLFY
Subjt:  MASPISFLFIVIVLALAVLLHCPSV-CSEEIQGQVVTEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLNDAFENFLFY

Query:  NQATVQNVQNALRFGCSYSSQRGNFNPGLFMQGEINKAHSFQKWFTLYNIVLFLVGCCFFIL
        N+AT Q+V+NALR GCS+SSQRGNFN GLFMQGE++KAH+FQ+WF L+   L LVGCCF IL
Subjt:  NQATVQNVQNALRFGCSYSSQRGNFNPGLFMQGEINKAHSFQKWFTLYNIVLFLVGCCFFIL

A0A6J1E0J9 uncharacterized protein LOC1110252894.7e-6481.05Show/hide
Query:  FIVIVLALAVLLHCPSVCSEEIQGQVVTEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLNDAFENFLFYNQATVQNVQ
        F+ I+LALAV L  PSVC+EEI GQVVTEA +CFDNKFIYNGC+S YRLNPSGSFNVPPEATNLFC+GPCL+ET+LVL+CL+DAF NFLFYN+A  QNV+
Subjt:  FIVIVLALAVLLHCPSVCSEEIQGQVVTEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLNDAFENFLFYNQATVQNVQ

Query:  NALRFGCSYSSQRGNFNPGLFMQGEINKAHSFQKWFTLYNIVLFLVGCCFFIL
        NALR GCSYSSQRGNFNPGLFMQGEI+KAHSFQKW T Y I+L LVGCCFFIL
Subjt:  NALRFGCSYSSQRGNFNPGLFMQGEINKAHSFQKWFTLYNIVLFLVGCCFFIL

A0A6J1EZD6 uncharacterized protein LOC1114378114.3e-5768.94Show/hide
Query:  MASPISFLFIVIVLALAVLLHCPSVCSEEIQGQVVTEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLNDAFENFLFYN
        MASP+  L       L + L+C SVC EE++GQ VT+AF+CFDN  IY GCESAYRLNP+G+ NVP EATNLFCNGPCLIETQL+LNCL+ AF NFLFYN
Subjt:  MASPISFLFIVIVLALAVLLHCPSVCSEEIQGQVVTEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLNDAFENFLFYN

Query:  QATVQNVQNALRFGCSYSSQRGNFNPGLFMQGEINKAHSFQKWFTLYNIVLFLVGCCFFIL
        +ATV ++QNALR GCSYS+QRGNFNPG FMQGEI+K H+ QKW TLY  +  L+GCCFFIL
Subjt:  QATVQNVQNALRFGCSYSSQRGNFNPGLFMQGEINKAHSFQKWFTLYNIVLFLVGCCFFIL

A0A6J1JMH7 uncharacterized protein LOC1114865291.0e-5871.25Show/hide
Query:  MASPISFLFIVIVLALAVLLHCPSVCSEEIQGQVVTEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLNDAFENFLFYN
        MASP+  L ++ + ALA  L+C SVC EE +GQ VT+ F+CFDN  IYNGCESAYRLNPSG+ NVP +ATNLFCNGPCLIETQL+LNCL+ AF+NFLFYN
Subjt:  MASPISFLFIVIVLALAVLLHCPSVCSEEIQGQVVTEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLNDAFENFLFYN

Query:  QATVQNVQNALRFGCSYSSQRGNFNPGLFMQGEINKAHSFQKWFTLYNIVLFLVGCCFFI
        +ATV  VQNALR GCSYS+QRGNFNPG FMQGEI+K H+ QKW TLY  VLFL+GCCF +
Subjt:  QATVQNVQNALRFGCSYSSQRGNFNPGLFMQGEINKAHSFQKWFTLYNIVLFLVGCCFFI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G56320.1 BEST Arabidopsis thaliana protein match is: Glycine-rich protein family (TAIR:AT5G49350.2)6.3e-2955.45Show/hide
Query:  GQVVTEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLNDAFENFLFYNQATVQNVQNALRFGCSYSSQRGNFNPGLFMQ
        G +V  A  CF+N  +Y GC  A+RLN  G F VPPE T+ FCNGPC  ET+LVL C+N    +F+FYN+AT ++V+NALR GCS S  RGNFN G + Q
Subjt:  GQVVTEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLNDAFENFLFYNQATVQNVQNALRFGCSYSSQRGNFNPGLFMQ

Query:  G
        G
Subjt:  G

AT5G49350.1 Glycine-rich protein family5.4e-2039.78Show/hide
Query:  QVVTEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLNDAFENFLFYNQATVQNVQNALRFGCSYSSQRGNFN
        ++V +A +C + K IY  C+ ++RL  +G  N+P   T  FC GPC  ET L LNC+ +   ++ F+N+AT+ +++  L+ GCSY  +RG FN
Subjt:  QVVTEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLNDAFENFLFYNQATVQNVQNALRFGCSYSSQRGNFN

AT5G49350.2 Glycine-rich protein family5.4e-2039.78Show/hide
Query:  QVVTEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLNDAFENFLFYNQATVQNVQNALRFGCSYSSQRGNFN
        ++V +A +C + K IY  C+ ++RL  +G  N+P   T  FC GPC  ET L LNC+ +   ++ F+N+AT+ +++  L+ GCSY  +RG FN
Subjt:  QVVTEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLNDAFENFLFYNQATVQNVQNALRFGCSYSSQRGNFN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCCCAATTAGCTTCCTCTTCATCGTCATCGTTCTCGCTCTCGCTGTCTTGCTCCATTGTCCCTCAGTTTGTTCTGAGGAGATTCAAGGACAAGTAGTGACTGA
AGCCTTCAAATGTTTTGACAATAAGTTTATATACAATGGGTGTGAAAGTGCTTATAGGTTGAATCCAAGTGGGAGTTTCAATGTCCCTCCTGAGGCTACTAATTTGTTTT
GCAATGGACCGTGTTTGATCGAAACACAACTTGTGCTTAACTGCCTCAACGACGCATTTGAAAACTTCTTATTTTACAATCAAGCCACGGTGCAAAACGTTCAAAACGCC
CTCCGCTTCGGTTGTAGCTACTCAAGCCAGAGAGGGAACTTCAATCCGGGATTGTTCATGCAAGGTGAAATCAACAAAGCCCACAGCTTCCAAAAATGGTTCACATTATA
TAATATTGTTCTTTTTCTTGTTGGGTGTTGTTTTTTCATCTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCCCAATTAGCTTCCTCTTCATCGTCATCGTTCTCGCTCTCGCTGTCTTGCTCCATTGTCCCTCAGTTTGTTCTGAGGAGATTCAAGGACAAGTAGTGACTGA
AGCCTTCAAATGTTTTGACAATAAGTTTATATACAATGGGTGTGAAAGTGCTTATAGGTTGAATCCAAGTGGGAGTTTCAATGTCCCTCCTGAGGCTACTAATTTGTTTT
GCAATGGACCGTGTTTGATCGAAACACAACTTGTGCTTAACTGCCTCAACGACGCATTTGAAAACTTCTTATTTTACAATCAAGCCACGGTGCAAAACGTTCAAAACGCC
CTCCGCTTCGGTTGTAGCTACTCAAGCCAGAGAGGGAACTTCAATCCGGGATTGTTCATGCAAGGTGAAATCAACAAAGCCCACAGCTTCCAAAAATGGTTCACATTATA
TAATATTGTTCTTTTTCTTGTTGGGTGTTGTTTTTTCATCTTATAATAAACATTCATCTCCCTAAACATATACTTGATTATCTTCCTCTACTTTCAATTTTGAAATGAAA
AACTTTCCATATTCCATTTCAATATATAAGAAATAAAGATATCCCATCGTTGAAGATATTAAAAAAAAAAGTGTCATCGTATGAATTAATTAGGAGCAAGCAAATTATAA
TTCAAAATACAGCGCCTTGAAACTAAAACCCTAATTATAAATTTATATAGCAACGACGCTAAAGAAAAGAACGTAACGAC
Protein sequenceShow/hide protein sequence
MASPISFLFIVIVLALAVLLHCPSVCSEEIQGQVVTEAFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLVLNCLNDAFENFLFYNQATVQNVQNA
LRFGCSYSSQRGNFNPGLFMQGEINKAHSFQKWFTLYNIVLFLVGCCFFIL