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Tan0010650 (gene) of Snake gourd v1 genome

Gene IDTan0010650
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionMADS-box transcription factor 8-like
Genome locationLG06:21324139..21324810
RNA-Seq ExpressionTan0010650
SyntenyTan0010650
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR002100 - Transcription factor, MADS-box
IPR033896 - MADS MEF2-like
IPR036879 - Transcription factor, MADS-box superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576135.1 Agamous-like MADS-box protein MADS4, partial [Cucurbita argyrosperma subsp. sororia]3.0e-2696.77Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNR
        MGRKKIEVKRIEDRCNRHVTFCKRR+GLIKKARELSVLCDVEVGLV+FTNRGRLYEFCSGNR
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNR

KAG6592961.1 Agamous-like MADS-box protein AGL3, partial [Cucurbita argyrosperma subsp. sororia]4.4e-2595.16Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNR
        MGRKKIE+KRIED CNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSG+R
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNR

KAG7014654.1 Agamous-like MADS-box protein AGL3, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-2693.85Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRKCL
        MGRKKIEVKRIEDRCNRHVTFCKRR+GLIKKARELSVLCDVEVGLV+FTNRGRLYEFCSGNR+ L
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRKCL

XP_023514206.1 MADS-box protein 04g005320-like [Cucurbita pepo subsp. pepo]1.7e-2495.08Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGN
        MGRKKIE+KRIED CNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSG+
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGN

XP_023514717.1 MADS-box protein EJ2-like [Cucurbita pepo subsp. pepo]1.2e-2596.72Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGN
        MGRKKIEVKRIEDRCNRHVTFCKRR+GLIKKARELSVLCDVEVGLV+FTNRGRLYEFCSGN
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGN

TrEMBL top hitse value%identityAlignment
A0A1S3CCC5 MADS-box transcription factor 8-like1.1e-2491.8Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGN
        MGRKKIEVK IEDRCNRHVTFCKRRSGL+KKARELSVLCDVEVG+++FTNRGRLYEFCSGN
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGN

A0A6J1DME3 MADS-box protein FLOWERING LOCUS C-like isoform X12.4e-2491.8Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGN
        MGRKKIEVKRIED CNRHVTFCKRRSGLIKKARELSVLCDVE+GL++FTNRGRLYEFC GN
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGN

A0A6J1DPA0 MADS-box transcription factor 8-like isoform X32.4e-2491.8Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGN
        MGRKKIEVKRIED CNRHVTFCKRRSGLIKKARELSVLCDVE+GL++FTNRGRLYEFC GN
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGN

A0A6J1H7I9 truncated transcription factor CAULIFLOWER D-like8.1e-2595.08Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGN
        MGRKKIE+KRIED CNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSG+
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGN

A0A6J1KPU7 MADS-box protein 04g005320-like1.1e-2493.44Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGN
        MGRKKIE+KRIED CNRHVTFCKRRSGLIKKARELSVLCDVEVGLV+FTNRGRLYEFCSG+
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGN

SwissProt top hitse value%identityAlignment
A0A217EJJ0 Agamous-like MADS-box protein AGL118.3e-1963.77Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRKCLFDDF
        MGR KIE+KRIE+  NR VTFCKRR+GL+KKA ELSVLCD EV L+VF++RGR+YE+ + N K   D +
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRKCLFDDF

F6I457 Agamous-like MADS-box protein AGL118.3e-1963.77Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRKCLFDDF
        MGR KIE+KRIE+  NR VTFCKRR+GL+KKA ELSVLCD EV L+VF++RGR+YE+ + N K   D +
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRKCLFDDF

Q38836 Agamous-like MADS-box protein AGL111.9e-1870.49Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGN
        MGR KIE+KRIE+  NR VTFCKRR+GL+KKA ELSVLCD EV L+VF+ RGRLYE+ + N
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGN

Q40168 Floral homeotic protein AGAMOUS1.1e-1863.77Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRKCLFDDF
        +GR KIE+KRIE+  NR VTFCKRR+GL+KKA ELSVLCD EV LVVF+NRGRLYE+ + + K   + +
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRKCLFDDF

Q9SAR1 MADS-box transcription factor 86.4e-1970Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSG
        MGR ++E+KRIE++ NR VTF KRR+GL+KKA ELSVLCD EV L++F+NRG+LYEFCSG
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSG

Arabidopsis top hitse value%identityAlignment
AT1G24260.1 K-box region and MADS-box transcription factor family protein1.3e-1967.21Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGN
        MGR ++E+KRIE++ NR VTF KRR+GL+KKA ELSVLCD EV L++F+NRG+LYEFCS +
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGN

AT1G24260.2 K-box region and MADS-box transcription factor family protein1.3e-1967.21Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGN
        MGR ++E+KRIE++ NR VTF KRR+GL+KKA ELSVLCD EV L++F+NRG+LYEFCS +
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGN

AT1G24260.3 K-box region and MADS-box transcription factor family protein1.3e-1967.21Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGN
        MGR ++E+KRIE++ NR VTF KRR+GL+KKA ELSVLCD EV L++F+NRG+LYEFCS +
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGN

AT4G09960.1 K-box region and MADS-box transcription factor family protein1.3e-1970.49Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGN
        MGR KIE+KRIE+  NR VTFCKRR+GL+KKA ELSVLCD EV L+VF+ RGRLYE+ + N
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGN

AT4G09960.2 K-box region and MADS-box transcription factor family protein1.3e-1970.49Show/hide
Query:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGN
        MGR KIE+KRIE+  NR VTFCKRR+GL+KKA ELSVLCD EV L+VF+ RGRLYE+ + N
Subjt:  MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACGGAAAAAGATCGAGGTGAAGCGAATCGAAGATAGGTGTAATCGCCATGTGACTTTCTGCAAGAGAAGATCTGGATTAATCAAGAAAGCTCGAGAGCTCTCTGT
TCTCTGCGACGTTGAGGTCGGACTCGTCGTCTTCACCAACCGCGGCCGCCTCTATGAGTTTTGCAGCGGAAACAGAAAATGCCTGTTTGATGATTTTTCGTTGGAACTTA
GGCTCTCTGATTTCTTCCTGAATGTTTCTCTCGTCCGTCCCTGGCTTTCTGCTCTCAGGATTTACGTGTTTTCTGCCGTATATGTGAATGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGACGGAAAAAGATCGAGGTGAAGCGAATCGAAGATAGGTGTAATCGCCATGTGACTTTCTGCAAGAGAAGATCTGGATTAATCAAGAAAGCTCGAGAGCTCTCTGT
TCTCTGCGACGTTGAGGTCGGACTCGTCGTCTTCACCAACCGCGGCCGCCTCTATGAGTTTTGCAGCGGAAACAGAAAATGCCTGTTTGATGATTTTTCGTTGGAACTTA
GGCTCTCTGATTTCTTCCTGAATGTTTCTCTCGTCCGTCCCTGGCTTTCTGCTCTCAGGATTTACGTGTTTTCTGCCGTATATGTGAATGACTAA
Protein sequenceShow/hide protein sequence
MGRKKIEVKRIEDRCNRHVTFCKRRSGLIKKARELSVLCDVEVGLVVFTNRGRLYEFCSGNRKCLFDDFSLELRLSDFFLNVSLVRPWLSALRIYVFSAVYVND