; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0010689 (gene) of Snake gourd v1 genome

Gene IDTan0010689
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionSWIB domain-containing protein
Genome locationLG01:9902004..9904780
RNA-Seq ExpressionTan0010689
SyntenyTan0010689
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR003121 - SWIB/MDM2 domain
IPR036885 - SWIB/MDM2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE9606954.1 putative transcription regulator SWI/SNF-BAF60b family [Lupinus albus]1.5e-1656.79Show/hide
Query:  SKKIQLKPHLCKFFGIPLVSLRGEIPILISKFLKLYQPQSPGIKKDRIWEENLKAILHGKDGVGMPEVNKILSPQFNDPSL
        SK  +    LCKF GIP  S R EI ++ISKFLKLY  +SPGIKKD+IWE+NL+ +L GK+ +G PEV KILSP+F+  ++
Subjt:  SKKIQLKPHLCKFFGIPLVSLRGEIPILISKFLKLYQPQSPGIKKDRIWEENLKAILHGKDGVGMPEVNKILSPQFNDPSL

KAG6577105.1 hypothetical protein SDJN03_24679, partial [Cucurbita argyrosperma subsp. sororia]5.3e-1769.01Show/hide
Query:  PAKISVGARLL-SKKIQLKPHLCKFFGIPLVSLRGEIPILISKFLKLYQPQSPGIKKDRIWEENLKAILHG
        P  I++   L+ +KKIQLKP LCKF GIPLV+ RG+IPILI+KFLK YQ QSPGI KD  WEENLKA LHG
Subjt:  PAKISVGARLL-SKKIQLKPHLCKFFGIPLVSLRGEIPILISKFLKLYQPQSPGIKKDRIWEENLKAILHG

KAG7015106.1 hypothetical protein SDJN02_22739 [Cucurbita argyrosperma subsp. argyrosperma]1.7e-2380.56Show/hide
Query:  MAPAKISVGARLLSKKIQLKPHLCKFFGIPLVSLRGEIPILISKFLKLYQPQSPGIKKDRIWEENLKAILHG
        MAPAKISVGARLLS+KIQLKP LCKF GIPL++ RG+IPILI+KFLK YQ QSPGI KD  WEENLKA LHG
Subjt:  MAPAKISVGARLLSKKIQLKPHLCKFFGIPLVSLRGEIPILISKFLKLYQPQSPGIKKDRIWEENLKAILHG

XP_019421169.1 PREDICTED: uncharacterized protein LOC109331245 [Lupinus angustifolius]1.2e-1655.29Show/hide
Query:  SKKIQLKPHLCKFFGIPLVSLRGEIPILISKFLKLYQPQSPGIKKDRIWEENLKAILHGKDGVGMPEVNKILSPQFNDPSLRNME
        SK  +    LCKF GIP  S R EI ++ISKFLKLY  +SPGIKKD+IWE+NL+ +L GK+ +G PEV KILSP+F+  ++   E
Subjt:  SKKIQLKPHLCKFFGIPLVSLRGEIPILISKFLKLYQPQSPGIKKDRIWEENLKAILHGKDGVGMPEVNKILSPQFNDPSLRNME

XP_022136393.1 uncharacterized protein LOC111008113 [Momordica charantia]3.9e-4485.85Show/hide
Query:  MAPAKISVGARLLSKKIQLKPHLCKFFGIPLVSLRGEIPILISKFLKLYQPQSPGIKKDRIWEENLKAILHGKDGVGMPEVNKILSPQFNDPSLRNMEIE
        MAPAKI+V A +LSKK+Q KP LCKF GIPLVS RG+IPILISKFLKLYQPQSPG++KDRIWEENLKAIL GKDGVGMPEVNKILSPQFND SLRNME+E
Subjt:  MAPAKISVGARLLSKKIQLKPHLCKFFGIPLVSLRGEIPILISKFLKLYQPQSPGIKKDRIWEENLKAILHGKDGVGMPEVNKILSPQFNDPSLRNMEIE

Query:  RQKDIR
        RQKDIR
Subjt:  RQKDIR

TrEMBL top hitse value%identityAlignment
A0A4P1QT43 SWIB domain-containing protein5.7e-1755.29Show/hide
Query:  SKKIQLKPHLCKFFGIPLVSLRGEIPILISKFLKLYQPQSPGIKKDRIWEENLKAILHGKDGVGMPEVNKILSPQFNDPSLRNME
        SK  +    LCKF GIP  S R EI ++ISKFLKLY  +SPGIKKD+IWE+NL+ +L GK+ +G PEV KILSP+F+  ++   E
Subjt:  SKKIQLKPHLCKFFGIPLVSLRGEIPILISKFLKLYQPQSPGIKKDRIWEENLKAILHGKDGVGMPEVNKILSPQFNDPSLRNME

A0A4P1RHA4 SWIB domain-containing protein7.4e-1756.79Show/hide
Query:  SKKIQLKPHLCKFFGIPLVSLRGEIPILISKFLKLYQPQSPGIKKDRIWEENLKAILHGKDGVGMPEVNKILSPQFNDPSL
        SK  +    LCKF GIP  S R EI ++ISKFLKLY  +SPGIKKD+IWE+NL+ +L GK+ +G PEV KILSP+F+  ++
Subjt:  SKKIQLKPHLCKFFGIPLVSLRGEIPILISKFLKLYQPQSPGIKKDRIWEENLKAILHGKDGVGMPEVNKILSPQFNDPSL

A0A6A4Q0B8 Putative transcription regulator SWI/SNF-BAF60b family7.4e-1756.79Show/hide
Query:  SKKIQLKPHLCKFFGIPLVSLRGEIPILISKFLKLYQPQSPGIKKDRIWEENLKAILHGKDGVGMPEVNKILSPQFNDPSL
        SK  +    LCKF GIP  S R EI ++ISKFLKLY  +SPGIKKD+IWE+NL+ +L GK+ +G PEV KILSP+F+  ++
Subjt:  SKKIQLKPHLCKFFGIPLVSLRGEIPILISKFLKLYQPQSPGIKKDRIWEENLKAILHGKDGVGMPEVNKILSPQFNDPSL

A0A6A5MEA5 Putative transcription regulator SWI/SNF-BAF60b family7.4e-1756.79Show/hide
Query:  SKKIQLKPHLCKFFGIPLVSLRGEIPILISKFLKLYQPQSPGIKKDRIWEENLKAILHGKDGVGMPEVNKILSPQFNDPSL
        SK  +    LCKF GIP  S R EI ++ISKFLKLY  +SPGIKKD+IWE+NL+ +L GK+ +G PEV KILSP+F+  ++
Subjt:  SKKIQLKPHLCKFFGIPLVSLRGEIPILISKFLKLYQPQSPGIKKDRIWEENLKAILHGKDGVGMPEVNKILSPQFNDPSL

A0A6J1C7G5 uncharacterized protein LOC1110081131.9e-4485.85Show/hide
Query:  MAPAKISVGARLLSKKIQLKPHLCKFFGIPLVSLRGEIPILISKFLKLYQPQSPGIKKDRIWEENLKAILHGKDGVGMPEVNKILSPQFNDPSLRNMEIE
        MAPAKI+V A +LSKK+Q KP LCKF GIPLVS RG+IPILISKFLKLYQPQSPG++KDRIWEENLKAIL GKDGVGMPEVNKILSPQFND SLRNME+E
Subjt:  MAPAKISVGARLLSKKIQLKPHLCKFFGIPLVSLRGEIPILISKFLKLYQPQSPGIKKDRIWEENLKAILHGKDGVGMPEVNKILSPQFNDPSLRNMEIE

Query:  RQKDIR
        RQKDIR
Subjt:  RQKDIR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G17510.1 unknown protein4.2e-0440Show/hide
Query:  FFGIPLVSLRGEIPILISKFLKLYQPQSPGIKKDRIWEENLKAILHGKDGVGMPEVNKIL
        F GIP + +R E  +L+SK++++ Q +    KK    EE LK +L G+D VG+ E  K+L
Subjt:  FFGIPLVSLRGEIPILISKFLKLYQPQSPGIKKDRIWEENLKAILHGKDGVGMPEVNKIL

AT1G31760.1 SWIB/MDM2 domain superfamily protein1.7e-0540Show/hide
Query:  RGEIPILISKFLKLYQPQSPGIKKDRIWEENLKAILHGKDGVGMPEVNKILSPQF
        RG     + +++KL+  Q+P  KK+   ++ LK I  GKD VG+ E+ K+LSP F
Subjt:  RGEIPILISKFLKLYQPQSPGIKKDRIWEENLKAILHGKDGVGMPEVNKILSPQF

AT2G35605.1 SWIB/MDM2 domain superfamily protein3.8e-0534.74Show/hide
Query:  MAPAKISVGARL------LSKKIQLKPHLCKFFGIPLVSLRGEIPILISKFLKLYQPQSPGIKKDRIWEENLKAILHGKDGVGMPEVNKILSPQF
        MA A  S GA+       + K + +   L  F G   VS R      I +++KL   Q+P  K++ + +E LK I  GKD VG  E++K+LS  F
Subjt:  MAPAKISVGARL------LSKKIQLKPHLCKFFGIPLVSLRGEIPILISKFLKLYQPQSPGIKKDRIWEENLKAILHGKDGVGMPEVNKILSPQF

AT3G03590.1 SWIB/MDM2 domain superfamily protein4.4e-0634.09Show/hide
Query:  APAKISVGARLLSKKIQLKPHLCKFFGIPLVSLRGEIPILISKFLKLYQPQSPGIKKDRIWEENLKAILHGKDGVGMPEVNKILSPQF
        +PAK +  +  + K   + P L +F G    S R +    I  ++K +  Q+P  K++   +E LK I  GKD VG  E++K+LSP F
Subjt:  APAKISVGARLLSKKIQLKPHLCKFFGIPLVSLRGEIPILISKFLKLYQPQSPGIKKDRIWEENLKAILHGKDGVGMPEVNKILSPQF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCCGCCAAGATTAGTGTCGGTGCTCGTCTTCTTAGCAAGAAAATTCAACTCAAACCTCATCTCTGCAAGTTCTTCGGTATTCCTCTCGTTTCTCTTCGCGGTGA
AATTCCGATCTTAATTTCCAAGTTCCTCAAGCTCTATCAACCTCAGAGCCCTGGTATCAAAAAGGACAGGATCTGGGAGGAAAACTTAAAAGCTATATTACATGGTAAAG
ACGGAGTTGGGATGCCAGAGGTTAACAAAATCCTCTCTCCCCAATTCAACGATCCAAGTCTAAGAAATATGGAAATTGAACGTCAAAAAGATATCAGGTCATCAGGAATT
TACCTTGTTTTTCCATTGTTCTTTTCATGTTTAAACAGCACATGA
mRNA sequenceShow/hide mRNA sequence
AGAAAACGTAAAAATGTGTTTTTTTTTAACCAAGAATAATCAACCCGAAGCCAGGCCCAATAACCAACCAGCTGGTTAAAGTAGGGAATTGCAGAGGAAGCCATGGCAGC
CACCTCCGGCGAAAATGAGAAATGCTTAACAACAAGATAGAGAACTGGAGATTCACAGTCCGATCAAGCTGGTGATTAGTACGAAATCTCAAAATTCCATGGCTCCCGCC
AAGATTAGTGTCGGTGCTCGTCTTCTTAGCAAGAAAATTCAACTCAAACCTCATCTCTGCAAGTTCTTCGGTATTCCTCTCGTTTCTCTTCGCGGTGAAATTCCGATCTT
AATTTCCAAGTTCCTCAAGCTCTATCAACCTCAGAGCCCTGGTATCAAAAAGGACAGGATCTGGGAGGAAAACTTAAAAGCTATATTACATGGTAAAGACGGAGTTGGGA
TGCCAGAGGTTAACAAAATCCTCTCTCCCCAATTCAACGATCCAAGTCTAAGAAATATGGAAATTGAACGTCAAAAAGATATCAGGTCATCAGGAATTTACCTTGTTTTT
CCATTGTTCTTTTCATGTTTAAACAGCACATGAAATTAGTGGATCTATGTCCATCATAATGCCTCTTCACTGATGTTGTTCATCCATTTTTGCTTCATCGTTGCTCTTTT
TCTTTTCTAATCTATGTTTTTATTCAGGCAATACCATGCCAAACTTTAACCATGTTTTGTATATACATGATTTTCTTTTTCCTTTCCTACATGTTAGGCATGACAGCAGA
CGAGGCCAAAGTGGATAGGCTCTGACCATTTTGAAGTGTGCTTTTTGAGTTGATGAATGGAGCTAGAAGCTGCTTGTGGTTTTGTTAGATTAGAGCTTGCGGCCTTTCCA
GTGAGCCCCATTTAACAAATTCATCCGTGTAAGACTGATTAAAGAAAGCGTCTCTCTGATAATTCCATGTTTTGCTTTTCGTTCTTCCTGACATCTTTATTTCAAGTGCG
TTTGTAGGTTGTTCTCACCTGAAAATTAAGCATACTTTTGCTGAATCTGGAAGAATAGATTATCTTCCCTTTTACTTTATAGCATCTGCTGATCTGACCTGAAATTTACA
ACCTTGGCACTCATGACATCCATAATCTATCTGGATTCTCTCTGGTTTCTTGTAGGCCATCTACTTATTTTTCTTTTTAATTGGGCAATCTAGGTTTATTTTTAATGCAT
TTTTTTTTTTAAAAAAAAAAAGAGAAAAAAAGCACCCATTAAGAGTGGACGGTCTAATTTTATTACTAGATACTGCTGCAGAGAATCCAGGCCCCATGTTTCATTATATT
GCTATGGTCCCAC
Protein sequenceShow/hide protein sequence
MAPAKISVGARLLSKKIQLKPHLCKFFGIPLVSLRGEIPILISKFLKLYQPQSPGIKKDRIWEENLKAILHGKDGVGMPEVNKILSPQFNDPSLRNMEIERQKDIRSSGI
YLVFPLFFSCLNST