; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0010711 (gene) of Snake gourd v1 genome

Gene IDTan0010711
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTail fiber
Genome locationLG06:2955378..2956204
RNA-Seq ExpressionTan0010711
SyntenyTan0010711
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0036361 - racemase activity, acting on amino acids and derivatives (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575585.1 hypothetical protein SDJN03_26224, partial [Cucurbita argyrosperma subsp. sororia]9.4e-8074.65Show/hide
Query:  MASSKKWANTISRTASCLYFLLIFFQIPLFRVPCRAS--------SCTTPLELTCSQLLATELFPPPVVKALLYPGAIAKAILKNKPIPPFNSLPKLYKF
        MASSKKWA TISRTAS LYFLLIF Q+PLFRVPCR S        SCTTPLELTCSQLL++++FP PVV+ LLYPGAIAKAI KNKPIP F SLPK+YKF
Subjt:  MASSKKWANTISRTASCLYFLLIFFQIPLFRVPCRAS--------SCTTPLELTCSQLLATELFPPPVVKALLYPGAIAKAILKNKPIPPFNSLPKLYKF

Query:  IHVKA-PASPLISDLHRLEVIAGSYLAVGGAVMGMVRPGSGRMSLFGCLVAMWGIVWRKSSYLSPNMKIISTSIYPTMFVAVALAFFSIRKDVKRIVRSI
        I +K  PASP  SDLHRLEVIAGSYLAVGGA+MGMVRPGSGRMSLFGCLVAMWGIVWRKSSY + N +   + +YPTMF+AV LAF S+RKDV+RIVR +
Subjt:  IHVKA-PASPLISDLHRLEVIAGSYLAVGGAVMGMVRPGSGRMSLFGCLVAMWGIVWRKSSYLSPNMKIISTSIYPTMFVAVALAFFSIRKDVKRIVRSI

Query:  KPQGNPSWKNTKR
        K QGNPSWK   +
Subjt:  KPQGNPSWKNTKR

XP_022159190.1 uncharacterized protein LOC111025611 [Momordica charantia]9.4e-8077.25Show/hide
Query:  MASSKKWANTISRTASCLYFLLIFFQIPLFRVP-CRASSCTTPLELTCSQLLATELFPPPVVKALLYPGAIAKAILKNKPIPPFNSLPKLYKFIHVKAP-
        MASSK+ A TISRTASCLYFLLIFFQIPLFRVP CR +SCTTPLELTCSQLLA+E+FP  VV+ALLYPGAI KAIL+N+PIP FNSLPKLYKFIH+K+P 
Subjt:  MASSKKWANTISRTASCLYFLLIFFQIPLFRVP-CRASSCTTPLELTCSQLLATELFPPPVVKALLYPGAIAKAILKNKPIPPFNSLPKLYKFIHVKAP-

Query:  -ASPLISDLHRLEVIAGSYLAVGGAVMGMVRP----GSGRMSLFGCLVAMWGIVWRKSSYLSPNMKIISTSIYPTMFVAVALAFFSIRKDVKRIVRSIKP
         ASPL SDLHRLEVIAGSYLAV GA+MGMVRP    GSGRMSLFGCL+AMWGIV  K SYL+P  +I  + IYPTMFVAV  AF S+RKDV+RIVRSI+ 
Subjt:  -ASPLISDLHRLEVIAGSYLAVGGAVMGMVRP----GSGRMSLFGCLVAMWGIVWRKSSYLSPNMKIISTSIYPTMFVAVALAFFSIRKDVKRIVRSIKP

Query:  QGNPSWKNTKR
        +GNPSWK  KR
Subjt:  QGNPSWKNTKR

XP_022992029.1 uncharacterized protein LOC111488501 [Cucurbita maxima]2.5e-8075.47Show/hide
Query:  MASSKKWANTISRTASCLYFLLIFFQIPLFRVPCRAS-------SCTTPLELTCSQLLATELFPPPVVKALLYPGAIAKAILKNKPIPPFNSLPKLYKFI
        MASSKKWA TISRTAS LYFLLIF Q+PLFRVPCR S       SCTTPLELTCSQLL++++FP PVV+ LLYPGAIAKAI KNKPIP F SLPK+YKFI
Subjt:  MASSKKWANTISRTASCLYFLLIFFQIPLFRVPCRAS-------SCTTPLELTCSQLLATELFPPPVVKALLYPGAIAKAILKNKPIPPFNSLPKLYKFI

Query:  HVKA-PASPLISDLHRLEVIAGSYLAVGGAVMGMVRPGSGRMSLFGCLVAMWGIVWRKSSYLSPNMKIISTSIYPTMFVAVALAFFSIRKDVKRIVRSIK
         +KA PASP  SDLHRLEVIAGSYLAVGGA+MGMVRPGSGRMSLFGCLVAMWGIVWRKSSY + N +   + +YPTMF+AV LAF S+RKDV+RIVR +K
Subjt:  HVKA-PASPLISDLHRLEVIAGSYLAVGGAVMGMVRPGSGRMSLFGCLVAMWGIVWRKSSYLSPNMKIISTSIYPTMFVAVALAFFSIRKDVKRIVRSIK

Query:  PQGNPSWKNTKR
         QGNPSWK   +
Subjt:  PQGNPSWKNTKR

XP_023548699.1 uncharacterized protein LOC111807273 [Cucurbita pepo subsp. pepo]1.1e-8075.23Show/hide
Query:  MASSKKWANTISRTASCLYFLLIFFQIPLFRVPCRAS---------SCTTPLELTCSQLLATELFPPPVVKALLYPGAIAKAILKNKPIPPFNSLPKLYK
        MASSKKWA TISRTAS LYFLLIF Q+PLFRVPCR S         SCTTPLELTCSQLL++++FPPPVV+ LLYPGAIAKAI KNKPIP F SLPK+YK
Subjt:  MASSKKWANTISRTASCLYFLLIFFQIPLFRVPCRAS---------SCTTPLELTCSQLLATELFPPPVVKALLYPGAIAKAILKNKPIPPFNSLPKLYK

Query:  FIHVKA-PASPLISDLHRLEVIAGSYLAVGGAVMGMVRPGSGRMSLFGCLVAMWGIVWRKSSYLSPNMKIISTSIYPTMFVAVALAFFSIRKDVKRIVRS
        FI +K  PASP  SDLHRLEVIAGSYLAVGGA+MGMVRPGSGRMSLFGCLVAMWGIVWRKSSY + N +   + IYPTMF+AV LAF S+RKDV+RIVR 
Subjt:  FIHVKA-PASPLISDLHRLEVIAGSYLAVGGAVMGMVRPGSGRMSLFGCLVAMWGIVWRKSSYLSPNMKIISTSIYPTMFVAVALAFFSIRKDVKRIVRS

Query:  IKPQGNPSWKNTKR
        +K QGNPSWK   +
Subjt:  IKPQGNPSWKNTKR

XP_038898492.1 uncharacterized protein LOC120086115 [Benincasa hispida]1.0e-8178.16Show/hide
Query:  MASSKKWANTISRTASCLYFLLIFFQIPLFRVPCRASSCTTPLELTCSQLLATELFPPPVVKALLYPGAIAKAILKNKPIPPFNSLPKLYKFIHVKAPAS
        M SSK+WA TISRTAS LYF+LIFFQIPLFRV CR + CTTPLELTCSQLLA+E FP  VVK++LYPGAIAKAI KNKPIPPFNSLPKLYKFIHVK  AS
Subjt:  MASSKKWANTISRTASCLYFLLIFFQIPLFRVPCRASSCTTPLELTCSQLLATELFPPPVVKALLYPGAIAKAILKNKPIPPFNSLPKLYKFIHVKAPAS

Query:  PLISDLHRLEVIAGSYLAVGGAVMGMVRPGSGRMSLFGCLVAMWGIVWRKSSYLSPNMKIISTSIYPTMFVAVALAFFSIRKDVKRIVRSIKPQGNP--S
        PL SDLHRLEVIAGSYLAVGG +MGMVR G GRMSLFGCL+AMWGIVWRKSSYL+PN +I  + IYPTMF+A+ LAF S+RKDV+RIVR++KPQ NP  S
Subjt:  PLISDLHRLEVIAGSYLAVGGAVMGMVRPGSGRMSLFGCLVAMWGIVWRKSSYLSPNMKIISTSIYPTMFVAVALAFFSIRKDVKRIVRSIKPQGNP--S

Query:  WKNTKR
           TKR
Subjt:  WKNTKR

TrEMBL top hitse value%identityAlignment
A0A1S3CDX1 uncharacterized protein LOC1034997824.4e-7574.11Show/hide
Query:  MASSKKWANTISRTASCLYFLLIFFQIPLFRVPCRASSCTTPLELTCSQLLATELFPPPVVKALLYPGAIAKAILKNKPIPPFNSLPKLYKFIHVKAPAS
        M SS +WA TIS TAS LYFL+I FQIPLFRV CR + CTTPLELTCSQLLA+E+F P VVK +LYPGAIAKAI  NKPIPPFNSLPKLYKFI      S
Subjt:  MASSKKWANTISRTASCLYFLLIFFQIPLFRVPCRASSCTTPLELTCSQLLATELFPPPVVKALLYPGAIAKAILKNKPIPPFNSLPKLYKFIHVKAPAS

Query:  PLISDLHRLEVIAGSYLAVGGAVMGMVRPGSGRMSLFGCLVAMWGIVWRKSSYLSPNMKIISTSIYPTMFVAVALAFFSIRKDVKRIVRSIKPQGNP
        PL SDLHRLEVIAGSYLAVGG +MGMVR G GRMSLFGCL+ MWGIVWRKSSYL+PN +   + IYPTMF+ + LAF S+RKDV+RIVR++KPQ NP
Subjt:  PLISDLHRLEVIAGSYLAVGGAVMGMVRPGSGRMSLFGCLVAMWGIVWRKSSYLSPNMKIISTSIYPTMFVAVALAFFSIRKDVKRIVRSIKPQGNP

A0A5A7UZ20 Uncharacterized protein2.1e-7269.86Show/hide
Query:  MASSKKWANTISRTASCLYFLLIFFQIPLFRVPCRASSCTTPLELTCSQLLATELFPPPVVKALLYPGAIAKAILKNKPIPPFNSLPKLYKFIHVKAPAS
        M SS +WA TIS TAS LYFL+I FQIPLFRV CR + CTTPLELTCSQLLA+E+F P VVK +LYPGAIAKAI  NKPIPPFNSLPKLYKFI      S
Subjt:  MASSKKWANTISRTASCLYFLLIFFQIPLFRVPCRASSCTTPLELTCSQLLATELFPPPVVKALLYPGAIAKAILKNKPIPPFNSLPKLYKFIHVKAPAS

Query:  PLISDLHRLE------------VIAGSYLAVGGAVMGMVRPGSGRMSLFGCLVAMWGIVWRKSSYLSPNMKIISTSIYPTMFVAVALAFFSIRKDVKRIV
        PL SDLHRLE            VIAGSYLAVGG +MGMVR G GRMSLFGCL+ MWGIVWRKSSYL+PN +   + IYPTMF+ + LAF S+RKDV+RIV
Subjt:  PLISDLHRLE------------VIAGSYLAVGGAVMGMVRPGSGRMSLFGCLVAMWGIVWRKSSYLSPNMKIISTSIYPTMFVAVALAFFSIRKDVKRIV

Query:  RSIKPQGNP
        R++KPQ NP
Subjt:  RSIKPQGNP

A0A6J1DXZ5 uncharacterized protein LOC1110256114.6e-8077.25Show/hide
Query:  MASSKKWANTISRTASCLYFLLIFFQIPLFRVP-CRASSCTTPLELTCSQLLATELFPPPVVKALLYPGAIAKAILKNKPIPPFNSLPKLYKFIHVKAP-
        MASSK+ A TISRTASCLYFLLIFFQIPLFRVP CR +SCTTPLELTCSQLLA+E+FP  VV+ALLYPGAI KAIL+N+PIP FNSLPKLYKFIH+K+P 
Subjt:  MASSKKWANTISRTASCLYFLLIFFQIPLFRVP-CRASSCTTPLELTCSQLLATELFPPPVVKALLYPGAIAKAILKNKPIPPFNSLPKLYKFIHVKAP-

Query:  -ASPLISDLHRLEVIAGSYLAVGGAVMGMVRP----GSGRMSLFGCLVAMWGIVWRKSSYLSPNMKIISTSIYPTMFVAVALAFFSIRKDVKRIVRSIKP
         ASPL SDLHRLEVIAGSYLAV GA+MGMVRP    GSGRMSLFGCL+AMWGIV  K SYL+P  +I  + IYPTMFVAV  AF S+RKDV+RIVRSI+ 
Subjt:  -ASPLISDLHRLEVIAGSYLAVGGAVMGMVRP----GSGRMSLFGCLVAMWGIVWRKSSYLSPNMKIISTSIYPTMFVAVALAFFSIRKDVKRIVRSIKP

Query:  QGNPSWKNTKR
        +GNPSWK  KR
Subjt:  QGNPSWKNTKR

A0A6J1GMZ9 uncharacterized protein LOC1114558791.0e-7975.6Show/hide
Query:  MASSKKWANTISRTASCLYFLLIFFQIPLFRVPCRAS--------SCTTPLELTCSQLLATELFPPPVVKALLYPGAIAKAILKNKPIPPFNSLPKLYKF
        MASSKKWA TISRTAS LYFLLIF Q+PLFRVPCR S        SCTTPLELTCSQLL++++FP PVV+ LLYPGAIAKAI KNKPIP F SLPK+YKF
Subjt:  MASSKKWANTISRTASCLYFLLIFFQIPLFRVPCRAS--------SCTTPLELTCSQLLATELFPPPVVKALLYPGAIAKAILKNKPIPPFNSLPKLYKF

Query:  IHVKA-PASPLISDLHRLEVIAGSYLAVGGAVMGMVRPGSGRMSLFGCLVAMWGIVWRKSSYLSPNMKIISTSIYPTMFVAVALAFFSIRKDVKRIVRSI
        I +K  PASP  SDLHRLEVIAGSYLAVGGA+MGMVRPGSGRMSLFGCLVAMWGIVWRKS+Y   N +   + +YPTMF+AV LAF S+RKDV+RIVR +
Subjt:  IHVKA-PASPLISDLHRLEVIAGSYLAVGGAVMGMVRPGSGRMSLFGCLVAMWGIVWRKSSYLSPNMKIISTSIYPTMFVAVALAFFSIRKDVKRIVRSI

Query:  KPQGNPSWK
        K QGNPSWK
Subjt:  KPQGNPSWK

A0A6J1JWG5 uncharacterized protein LOC1114885011.2e-8075.47Show/hide
Query:  MASSKKWANTISRTASCLYFLLIFFQIPLFRVPCRAS-------SCTTPLELTCSQLLATELFPPPVVKALLYPGAIAKAILKNKPIPPFNSLPKLYKFI
        MASSKKWA TISRTAS LYFLLIF Q+PLFRVPCR S       SCTTPLELTCSQLL++++FP PVV+ LLYPGAIAKAI KNKPIP F SLPK+YKFI
Subjt:  MASSKKWANTISRTASCLYFLLIFFQIPLFRVPCRAS-------SCTTPLELTCSQLLATELFPPPVVKALLYPGAIAKAILKNKPIPPFNSLPKLYKFI

Query:  HVKA-PASPLISDLHRLEVIAGSYLAVGGAVMGMVRPGSGRMSLFGCLVAMWGIVWRKSSYLSPNMKIISTSIYPTMFVAVALAFFSIRKDVKRIVRSIK
         +KA PASP  SDLHRLEVIAGSYLAVGGA+MGMVRPGSGRMSLFGCLVAMWGIVWRKSSY + N +   + +YPTMF+AV LAF S+RKDV+RIVR +K
Subjt:  HVKA-PASPLISDLHRLEVIAGSYLAVGGAVMGMVRPGSGRMSLFGCLVAMWGIVWRKSSYLSPNMKIISTSIYPTMFVAVALAFFSIRKDVKRIVRSIK

Query:  PQGNPSWKNTKR
         QGNPSWK   +
Subjt:  PQGNPSWKNTKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G80200.1 unknown protein1.9e-3037.84Show/hide
Query:  SSKKWANTISRTASCLYFLLIFFQIPLFR-----------------------------VPCRASSCTTPLELTCSQLLATELFPPPVVKALLYPGAIAKA
        S KKWA+ IS  AS L+ LLI FQIPLFR                             V CR  SC TPLE+  S+L+AT+L P  +VK LLYPGAI K+
Subjt:  SSKKWANTISRTASCLYFLLIFFQIPLFR-----------------------------VPCRASSCTTPLELTCSQLLATELFPPPVVKALLYPGAIAKA

Query:  ILKNKPIPPFNSLPKLYKFIHVKAPASPLISDLHRLEVIAGSYLAVGGAVMGMVRPGSGRMSLFGCLVAMWGIVW------RKSSYLSPNMKIISTSIYP
        +     IP ++ L + Y F  +   +S   +D+H LEV AGS L + GA++ + +P   R++  G L+  WG++           ++SP+    S  +YP
Subjt:  ILKNKPIPPFNSLPKLYKFIHVKAPASPLISDLHRLEVIAGSYLAVGGAVMGMVRPGSGRMSLFGCLVAMWGIVW------RKSSYLSPNMKIISTSIYP

Query:  TMFVAVALAFFSIRKDVKRIVR
        T+F+A   AF S+R DV++I+R
Subjt:  TMFVAVALAFFSIRKDVKRIVR

AT5G11280.1 unknown protein3.6e-3740.87Show/hide
Query:  SKKWANTISRTASCLYFLLIFFQIPLFRVPCRASSCTTPLELTCSQLLATELFPPPVVKALLYPGAIAKAILKNKPIPPFNSLPKLYKFIHVKAPASPLI
        SK W    +  AS +YF+LI FQIPLFRVPCR+  C++P+ +T SQL+++E+FP P++KALLYPGA+   +  N   P + ++  +Y   +VK  ++  +
Subjt:  SKKWANTISRTASCLYFLLIFFQIPLFRVPCRASSCTTPLELTCSQLLATELFPPPVVKALLYPGAIAKAILKNKPIPPFNSLPKLYKFIHVKAPASPLI

Query:  SDLHRLEVIAGSYLAVGGAVMGMVRPGSGRMSLFGCLVAMWGIVWRKSSYLSPNMKIISTS------IYPTMFVAVALAFFSIRKDVKRIVRS--IKPQG
        +DL RLEV+AGSY +V GA +G+++P  GRMS+FG L+ +WG+V  K   L    K ++T       +YPTM +A+  AF  I+ D+++  R+   +P  
Subjt:  SDLHRLEVIAGSYLAVGGAVMGMVRPGSGRMSLFGCLVAMWGIVWRKSSYLSPNMKIISTS------IYPTMFVAVALAFFSIRKDVKRIVRS--IKPQG

Query:  NPSWKNTK
         P   ++K
Subjt:  NPSWKNTK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTCCAAAAAATGGGCAAACACCATATCTCGCACTGCCTCTTGTTTATATTTTCTTCTCATTTTCTTTCAAATTCCTCTTTTCAGAGTCCCATGCAGAGCCTC
ATCATGTACAACGCCACTAGAATTGACATGCTCCCAATTGTTAGCAACCGAGCTCTTTCCCCCACCAGTTGTGAAAGCACTTCTTTATCCTGGAGCCATTGCTAAAGCCA
TCCTTAAGAACAAGCCGATCCCACCCTTTAATAGCTTGCCAAAGCTATACAAGTTTATTCATGTAAAAGCACCCGCTTCTCCACTCATATCCGATCTCCACCGCCTCGAG
GTAATTGCAGGAAGTTATTTGGCAGTAGGAGGAGCTGTAATGGGCATGGTTAGACCTGGGAGTGGAAGAATGAGTTTGTTTGGTTGTCTTGTTGCAATGTGGGGTATTGT
TTGGAGGAAATCTTCATATTTAAGTCCCAATATGAAAATTATTAGCACTTCTATATATCCAACCATGTTTGTTGCTGTGGCTTTGGCTTTCTTTTCCATCAGGAAGGATG
TCAAAAGAATAGTTCGCAGCATTAAACCTCAAGGCAACCCTTCATGGAAGAACACTAAACGCAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTTCCAAAAAATGGGCAAACACCATATCTCGCACTGCCTCTTGTTTATATTTTCTTCTCATTTTCTTTCAAATTCCTCTTTTCAGAGTCCCATGCAGAGCCTC
ATCATGTACAACGCCACTAGAATTGACATGCTCCCAATTGTTAGCAACCGAGCTCTTTCCCCCACCAGTTGTGAAAGCACTTCTTTATCCTGGAGCCATTGCTAAAGCCA
TCCTTAAGAACAAGCCGATCCCACCCTTTAATAGCTTGCCAAAGCTATACAAGTTTATTCATGTAAAAGCACCCGCTTCTCCACTCATATCCGATCTCCACCGCCTCGAG
GTAATTGCAGGAAGTTATTTGGCAGTAGGAGGAGCTGTAATGGGCATGGTTAGACCTGGGAGTGGAAGAATGAGTTTGTTTGGTTGTCTTGTTGCAATGTGGGGTATTGT
TTGGAGGAAATCTTCATATTTAAGTCCCAATATGAAAATTATTAGCACTTCTATATATCCAACCATGTTTGTTGCTGTGGCTTTGGCTTTCTTTTCCATCAGGAAGGATG
TCAAAAGAATAGTTCGCAGCATTAAACCTCAAGGCAACCCTTCATGGAAGAACACTAAACGCAATTGA
Protein sequenceShow/hide protein sequence
MASSKKWANTISRTASCLYFLLIFFQIPLFRVPCRASSCTTPLELTCSQLLATELFPPPVVKALLYPGAIAKAILKNKPIPPFNSLPKLYKFIHVKAPASPLISDLHRLE
VIAGSYLAVGGAVMGMVRPGSGRMSLFGCLVAMWGIVWRKSSYLSPNMKIISTSIYPTMFVAVALAFFSIRKDVKRIVRSIKPQGNPSWKNTKRN