; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0010732 (gene) of Snake gourd v1 genome

Gene IDTan0010732
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationLG07:5516932..5517297
RNA-Seq ExpressionTan0010732
SyntenyTan0010732
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034014.1 uncharacterized protein E6C27_scaffold400G00820 [Cucumis melo var. makuwa]1.5e-1647.15Show/hide
Query:  MNLMFSIAMPIPNLVHLYINVIRMNVNVQSFEETSIQ-SVDPSLGVESSQCLDPDPQIVGTP-CDDEDMVTNNTYKEFRTETDDEFEELDFENSVHDIPS
        MN MFSIA+P PN+VHLY+ V        S  +T+I  +V+P       + +D +P+    P C +E+MV  N Y EFRTETDDEFEE+DF+   +++PS
Subjt:  MNLMFSIAMPIPNLVHLYINVIRMNVNVQSFEETSIQ-SVDPSLGVESSQCLDPDPQIVGTP-CDDEDMVTNNTYKEFRTETDDEFEELDFENSVHDIPS

Query:  NTFNELDNNVLDNTTEHDPIQEP
        NTF +LD N +D   EHDPI  P
Subjt:  NTFNELDNNVLDNTTEHDPIQEP

KAA0060519.1 uncharacterized protein E6C27_scaffold22G003730 [Cucumis melo var. makuwa]3.9e-1747.37Show/hide
Query:  MPIPNLVHLYINVIRMNVNVQSFEETSIQSVDPSLGVESSQCLDPDPQIVGTPC-DDEDMVTNNTYKEFRTETDDEFEELDFENSVHDIPSNTFNELDNN
        MPIPN+VHLY+NV RM +++    E   Q  D       +Q + PD +IV +   DDE+MV NN Y +F+TETDDEFEE DF+   H++PSNT  +++ +
Subjt:  MPIPNLVHLYINVIRMNVNVQSFEETSIQSVDPSLGVESSQCLDPDPQIVGTPC-DDEDMVTNNTYKEFRTETDDEFEELDFENSVHDIPSNTFNELDNN

Query:  VLDNTTEHDPIQEP
        V+D+  EHDPI  P
Subjt:  VLDNTTEHDPIQEP

KAA0066696.1 uncharacterized protein E6C27_scaffold271G00290 [Cucumis melo var. makuwa]1.3e-1544.74Show/hide
Query:  MPIPNLVHLYINVIRMNVNVQSFEETSIQSVDPSLGVESSQCLDPDPQIVGTPC-DDEDMVTNNTYKEFRTETDDEFEELDFENSVHDIPSNTFNELDNN
        MPIPN+VHLY+NV R+ +++    E   Q  D       +Q + PD ++V +   DDE+MV NN Y +F+TE DDEFEE DF+   H++P NT  ++D +
Subjt:  MPIPNLVHLYINVIRMNVNVQSFEETSIQSVDPSLGVESSQCLDPDPQIVGTPC-DDEDMVTNNTYKEFRTETDDEFEELDFENSVHDIPSNTFNELDNN

Query:  VLDNTTEHDPIQEP
        V+D+  EHDPI  P
Subjt:  VLDNTTEHDPIQEP

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.9e-1647.15Show/hide
Query:  MNLMFSIAMPIPNLVHLYINVIRMNVNVQSFEETSIQ-SVDPSLGVESSQCLDPDPQIVGTP-CDDEDMVTNNTYKEFRTETDDEFEELDFENSVHDIPS
        MN MFSIA+P PN+VHLY+ V        S  +T+I  +V+P       + +D +P+    P C +E+MV  N Y EFRTETDDEFEE+DF+   +++PS
Subjt:  MNLMFSIAMPIPNLVHLYINVIRMNVNVQSFEETSIQ-SVDPSLGVESSQCLDPDPQIVGTP-CDDEDMVTNNTYKEFRTETDDEFEELDFENSVHDIPS

Query:  NTFNELDNNVLDNTTEHDPIQEP
        NTF +LD N +D   EHDPI  P
Subjt:  NTFNELDNNVLDNTTEHDPIQEP

TYK01570.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.3e-1646.34Show/hide
Query:  MNLMFSIAMPIPNLVHLYINVIRMNVNVQSFEETSIQ-SVDPSLGVESSQCLDPDPQIVGTP-CDDEDMVTNNTYKEFRTETDDEFEELDFENSVHDIPS
        MN MFS+A+P PN+VHLY+ V        S  +T I  +V+P       + +D +P+    P C +E+MV  N Y EFRTETDDEFEE+DF+   +++PS
Subjt:  MNLMFSIAMPIPNLVHLYINVIRMNVNVQSFEETSIQ-SVDPSLGVESSQCLDPDPQIVGTP-CDDEDMVTNNTYKEFRTETDDEFEELDFENSVHDIPS

Query:  NTFNELDNNVLDNTTEHDPIQEP
        NTF +LD N +D   EHDPI  P
Subjt:  NTFNELDNNVLDNTTEHDPIQEP

TrEMBL top hitse value%identityAlignment
A0A5A7SS31 DBD_Tnp_Mut domain-containing protein7.2e-1747.15Show/hide
Query:  MNLMFSIAMPIPNLVHLYINVIRMNVNVQSFEETSIQ-SVDPSLGVESSQCLDPDPQIVGTP-CDDEDMVTNNTYKEFRTETDDEFEELDFENSVHDIPS
        MN MFSIA+P PN+VHLY+ V        S  +T+I  +V+P       + +D +P+    P C +E+MV  N Y EFRTETDDEFEE+DF+   +++PS
Subjt:  MNLMFSIAMPIPNLVHLYINVIRMNVNVQSFEETSIQ-SVDPSLGVESSQCLDPDPQIVGTP-CDDEDMVTNNTYKEFRTETDDEFEELDFENSVHDIPS

Query:  NTFNELDNNVLDNTTEHDPIQEP
        NTF +LD N +D   EHDPI  P
Subjt:  NTFNELDNNVLDNTTEHDPIQEP

A0A5A7V456 Uncharacterized protein1.9e-1747.37Show/hide
Query:  MPIPNLVHLYINVIRMNVNVQSFEETSIQSVDPSLGVESSQCLDPDPQIVGTPC-DDEDMVTNNTYKEFRTETDDEFEELDFENSVHDIPSNTFNELDNN
        MPIPN+VHLY+NV RM +++    E   Q  D       +Q + PD +IV +   DDE+MV NN Y +F+TETDDEFEE DF+   H++PSNT  +++ +
Subjt:  MPIPNLVHLYINVIRMNVNVQSFEETSIQSVDPSLGVESSQCLDPDPQIVGTPC-DDEDMVTNNTYKEFRTETDDEFEELDFENSVHDIPSNTFNELDNN

Query:  VLDNTTEHDPIQEP
        V+D+  EHDPI  P
Subjt:  VLDNTTEHDPIQEP

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein9.4e-1747.15Show/hide
Query:  MNLMFSIAMPIPNLVHLYINVIRMNVNVQSFEETSIQ-SVDPSLGVESSQCLDPDPQIVGTP-CDDEDMVTNNTYKEFRTETDDEFEELDFENSVHDIPS
        MN MFSIA+P PN+VHLY+ V        S  +T+I  +V+P       + +D +P+    P C +E+MV  N Y EFRTETDDEFEE+DF+   +++PS
Subjt:  MNLMFSIAMPIPNLVHLYINVIRMNVNVQSFEETSIQ-SVDPSLGVESSQCLDPDPQIVGTP-CDDEDMVTNNTYKEFRTETDDEFEELDFENSVHDIPS

Query:  NTFNELDNNVLDNTTEHDPIQEP
        NTF +LD N +D   EHDPI  P
Subjt:  NTFNELDNNVLDNTTEHDPIQEP

A0A5D3BR52 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.1e-1646.34Show/hide
Query:  MNLMFSIAMPIPNLVHLYINVIRMNVNVQSFEETSIQ-SVDPSLGVESSQCLDPDPQIVGTP-CDDEDMVTNNTYKEFRTETDDEFEELDFENSVHDIPS
        MN MFS+A+P PN+VHLY+ V        S  +T I  +V+P       + +D +P+    P C +E+MV  N Y EFRTETDDEFEE+DF+   +++PS
Subjt:  MNLMFSIAMPIPNLVHLYINVIRMNVNVQSFEETSIQ-SVDPSLGVESSQCLDPDPQIVGTP-CDDEDMVTNNTYKEFRTETDDEFEELDFENSVHDIPS

Query:  NTFNELDNNVLDNTTEHDPIQEP
        NTF +LD N +D   EHDPI  P
Subjt:  NTFNELDNNVLDNTTEHDPIQEP

A0A5D3DVS6 Uncharacterized protein6.1e-1644.74Show/hide
Query:  MPIPNLVHLYINVIRMNVNVQSFEETSIQSVDPSLGVESSQCLDPDPQIVGTPC-DDEDMVTNNTYKEFRTETDDEFEELDFENSVHDIPSNTFNELDNN
        MPIPN+VHLY+NV R+ +++    E   Q  D       +Q + PD ++V +   DDE+MV NN Y +F+TE DDEFEE DF+   H++P NT  ++D +
Subjt:  MPIPNLVHLYINVIRMNVNVQSFEETSIQSVDPSLGVESSQCLDPDPQIVGTPC-DDEDMVTNNTYKEFRTETDDEFEELDFENSVHDIPSNTFNELDNN

Query:  VLDNTTEHDPIQEP
        V+D+  EHDPI  P
Subjt:  VLDNTTEHDPIQEP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTTAATGTTCTCAATTGCGATGCCAATCCCAAATTTAGTACATTTATATATCAATGTAATAAGGATGAATGTGAATGTACAAAGCTTTGAAGAAACGTCTATTCA
ATCAGTTGATCCTAGCCTAGGTGTTGAATCCAGCCAATGTCTTGACCCAGATCCTCAAATAGTTGGTACACCATGTGATGATGAAGATATGGTTACAAATAATACATATA
AAGAGTTTAGAACTGAAACAGATGATGAATTTGAAGAGTTGGATTTTGAGAATAGTGTACATGACATCCCTTCAAACACATTTAATGAGTTGGATAACAATGTATTAGAT
AACACTACCGAACATGATCCTATCCAAGAACCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACTTAATGTTCTCAATTGCGATGCCAATCCCAAATTTAGTACATTTATATATCAATGTAATAAGGATGAATGTGAATGTACAAAGCTTTGAAGAAACGTCTATTCA
ATCAGTTGATCCTAGCCTAGGTGTTGAATCCAGCCAATGTCTTGACCCAGATCCTCAAATAGTTGGTACACCATGTGATGATGAAGATATGGTTACAAATAATACATATA
AAGAGTTTAGAACTGAAACAGATGATGAATTTGAAGAGTTGGATTTTGAGAATAGTGTACATGACATCCCTTCAAACACATTTAATGAGTTGGATAACAATGTATTAGAT
AACACTACCGAACATGATCCTATCCAAGAACCGTGA
Protein sequenceShow/hide protein sequence
MNLMFSIAMPIPNLVHLYINVIRMNVNVQSFEETSIQSVDPSLGVESSQCLDPDPQIVGTPCDDEDMVTNNTYKEFRTETDDEFEELDFENSVHDIPSNTFNELDNNVLD
NTTEHDPIQEP