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Tan0010733 (gene) of Snake gourd v1 genome

Gene IDTan0010733
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionauxin-regulated gene involved in organ size
Genome locationLG03:57794602..57795291
RNA-Seq ExpressionTan0010733
SyntenyTan0010733
Gene Ontology termsGO:0009725 - response to hormone (biological process)
GO:0046622 - positive regulation of organ growth (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025988.1 hypothetical protein E6C27_scaffold34G003090 [Cucumis melo var. makuwa]1.7e-1379.69Show/hide
Query:  MLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPSQVPAEEHRVPAAGGGHDSA
        MLIV+AVSLLILPLVLPPLPPPPVLLLF+PVLIMSLL+FLALSPS+ PAE HR   + GG++SA
Subjt:  MLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPSQVPAEEHRVPAAGGGHDSA

KAG2683596.1 hypothetical protein I3760_10G039000 [Carya illinoinensis]1.6e-0871.43Show/hide
Query:  FFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPSQVP
        +FS RS+ ++IV+AVSL+++PL+LPPLPPPP+LLLF+PVLIMSLLV LALS S VP
Subjt:  FFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPSQVP

KAG2687345.1 hypothetical protein I3760_09G047200 [Carya illinoinensis]2.1e-0865Show/hide
Query:  MVRAFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPSQVP
        M R + S+ ++ +++V+ VSL++LPLV+PPLPPPP+LLLF+PVLIMSLLV LALSPSQ P
Subjt:  MVRAFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPSQVP

KAG6603314.1 hypothetical protein SDJN03_03923, partial [Cucurbita argyrosperma subsp. sororia]2.8e-2188.31Show/hide
Query:  MVRAFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPSQVPAEEHRVPA-AGGGHDSA
        MVRAFFSLRSVAMLIVVA SLLILPLVLPPLPPPPVLLLF+PVLIM  L+FLALSPS+VPAEEHRV A  GGGHDSA
Subjt:  MVRAFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPSQVPAEEHRVPA-AGGGHDSA

TYK04223.1 hypothetical protein E5676_scaffold24967G00300 [Cucumis melo var. makuwa]4.8e-1379.69Show/hide
Query:  MLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPSQVPAEEHRVPAAGGGHDSA
        MLIV+AVSLLILPLVLPPLPPPPVLLLF+PVLIMSLL+FLALSPS+ PAE HR     GG +SA
Subjt:  MLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPSQVPAEEHRVPAAGGGHDSA

TrEMBL top hitse value%identityAlignment
A0A0A0L0Y7 Uncharacterized protein6.3e-1982.89Show/hide
Query:  MVRAFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPSQVPAEEHRVPAAGGGHDSA
        MVR FFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLF+PVLIMSLL+FLALSPS+VPAEEH     G   +SA
Subjt:  MVRAFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPSQVPAEEHRVPAAGGGHDSA

A0A2N9F7M5 Uncharacterized protein4.5e-0969.09Show/hide
Query:  FSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPSQVP
        +++R + +++++ VSLL+LPLVLPPLPPPP+LLLF+PVL+MSLLVFLAL+PSQVP
Subjt:  FSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPSQVP

A0A5A7SII5 Uncharacterized protein8.0e-1479.69Show/hide
Query:  MLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPSQVPAEEHRVPAAGGGHDSA
        MLIV+AVSLLILPLVLPPLPPPPVLLLF+PVLIMSLL+FLALSPS+ PAE HR   + GG++SA
Subjt:  MLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPSQVPAEEHRVPAAGGGHDSA

A0A5B7AL58 Uncharacterized protein (Fragment)2.0e-0965Show/hide
Query:  MVRAFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPSQVP
        M+  FFSLR+V +++V+ VSLL+LP+VLPPLPPPP++LLFIP+LIM++L+ LA SPSQ+P
Subjt:  MVRAFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPSQVP

A0A5D3BWW3 Uncharacterized protein2.3e-1379.69Show/hide
Query:  MLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPSQVPAEEHRVPAAGGGHDSA
        MLIV+AVSLLILPLVLPPLPPPPVLLLF+PVLIMSLL+FLALSPS+ PAE HR     GG +SA
Subjt:  MLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPSQVPAEEHRVPAAGGGHDSA

SwissProt top hitse value%identityAlignment
C7SFP6 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE2.0e-0660.38Show/hide
Query:  FFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPS
        +FSL S+ +L+ +  SLLILPLVLPPLPPPP +LL +P+ IM LL+ LA  PS
Subjt:  FFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPS

Q6NMD6 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE2.7e-0662.26Show/hide
Query:  FFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPS
        +FSL S+ +L+ +  SLLILPLVLPPLPPPP +LL +P+ IM LLV LA  PS
Subjt:  FFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPS

Q7X6L2 Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE2.0e-0644.44Show/hide
Query:  FFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPSQVPAEEHRVPAAGGGHDSA
        +FS+ S+ +L+ V  SL+ILPLVLPPLPPPP +L+ +PV ++ LL+ LA  P+   +        GGG + A
Subjt:  FFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPSQVPAEEHRVPAAGGGHDSA

Q8RWS1 Protein ORGAN SIZE RELATED 12.0e-0655.17Show/hide
Query:  AFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPSQVPA
        +  + RSVA+L+ +++ LLILP  LPPLPPPP  LL +P+L+M LL+FLA SPS  P+
Subjt:  AFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPSQVPA

Q8RXL7 ARGOS-like protein3.5e-0659.26Show/hide
Query:  AFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPS
        ++FSL S+ +L+ +  SLLILPL+LPPLPPPP +LL IP+ IM LL+ LA  PS
Subjt:  AFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPS

Arabidopsis top hitse value%identityAlignment
AT2G41225.1 unknown protein9.7e-0458.97Show/hide
Query:  VVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLAL
        VV V L +LP VLPPLPPPP++L+ IPV++M +L++LA+
Subjt:  VVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLAL

AT2G41230.1 unknown protein1.4e-0755.17Show/hide
Query:  AFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPSQVPA
        +  + RSVA+L+ +++ LLILP  LPPLPPPP  LL +P+L+M LL+FLA SPS  P+
Subjt:  AFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPSQVPA

AT2G44080.1 ARGOS-like2.5e-0759.26Show/hide
Query:  AFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPS
        ++FSL S+ +L+ +  SLLILPL+LPPLPPPP +LL IP+ IM LL+ LA  PS
Subjt:  AFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPS

AT3G59900.1 auxin-regulated gene involved in organ size1.9e-0762.26Show/hide
Query:  FFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPS
        +FSL S+ +L+ +  SLLILPLVLPPLPPPP +LL +P+ IM LLV LA  PS
Subjt:  FFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGGGCGTTTTTTAGCTTGAGATCGGTGGCAATGTTGATTGTTGTGGCGGTATCTCTTTTGATATTGCCACTTGTGCTGCCGCCGTTGCCGCCACCGCCGGTGCT
GCTTCTGTTTATTCCGGTGCTTATTATGTCGTTGCTTGTGTTCTTGGCCCTGTCGCCGTCGCAGGTTCCGGCGGAGGAGCACCGTGTGCCCGCTGCCGGCGGTGGCCACG
ATTCGGCTTAA
mRNA sequenceShow/hide mRNA sequence
GCCTATATTACATGGACTTGACTGTGACCTTTTACCTCCTCAGCCGGTTTCCCTTTCCCCTTCCTCTCCTCTTCCCTTTATTACCTCCCCATCTCTGCAGTCCTTAGCCC
ACCACTCTCTCTCTCTCCTCTCTTTCTCTCTCTCTCTCTTGACCGTAAAATCAAAACCCTGCCCTTCATTCTACGGTCACCGGCGGCCAAGAAAAAACATTTTTTTTTTC
TTGTGGGTGACATTAGAGATAGAAAGTCGACGACTTTACTACGATATGCCCGAGAAGAATATCCAATTGGGTCACGTCAAATTTCAGCTTACGGTGGCGGTGACGGCGGA
GGTAGCGGTGGCGGTGGCGGGGGAGTTTGATGGTGAGGGCGTTTTTTAGCTTGAGATCGGTGGCAATGTTGATTGTTGTGGCGGTATCTCTTTTGATATTGCCACTTGTG
CTGCCGCCGTTGCCGCCACCGCCGGTGCTGCTTCTGTTTATTCCGGTGCTTATTATGTCGTTGCTTGTGTTCTTGGCCCTGTCGCCGTCGCAGGTTCCGGCGGAGGAGCA
CCGTGTGCCCGCTGCCGGCGGTGGCCACGATTCGGCTTAAATTTTTTTTTTTTCCTTTTGTTTTTCTTTTGGTTTTTTTGATTGGTTCTTCTTTGTTCAATGTATAATGG
AAAAATTTTGAGTGTAGTTGAATATTTTTC
Protein sequenceShow/hide protein sequence
MVRAFFSLRSVAMLIVVAVSLLILPLVLPPLPPPPVLLLFIPVLIMSLLVFLALSPSQVPAEEHRVPAAGGGHDSA