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Tan0010747 (gene) of Snake gourd v1 genome

Gene IDTan0010747
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationLG01:40607258..40607767
RNA-Seq ExpressionTan0010747
SyntenyTan0010747
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031737053.1 uncharacterized protein LOC116402138 [Cucumis sativus]3.0e-6376.47Show/hide
Query:  MTDVDPDERMAEMERKTNLLMKVVEERDLEIAYLKSQVQNKETVESSQTPVVRNDDKGKNIIQKEQPPQPA-SVASLSVQQLQDMIISSIRAQYGGPGQN
        M DV  +  MAEMERK NLLMKVV+ERD EIA LK Q+Q +ET ESSQTPVV+ DDKGKN++Q+ QP Q + SVASLSVQQLQDMI SSIRAQYGGP Q 
Subjt:  MTDVDPDERMAEMERKTNLLMKVVEERDLEIAYLKSQVQNKETVESSQTPVVRNDDKGKNIIQKEQPPQPA-SVASLSVQQLQDMIISSIRAQYGGPGQN

Query:  PLTYSKPYTKRIDNLRMPTGYQPPKFQQFDGKGNSKLHVAHFVETCKNAGTRGDLLVKQFVRTLKGNAFD
           YSKPYTKRIDNLRMP GYQPPKFQQFDGKGN K HVAHFVETC+NAG+RGD LV+QFVR+LKGNAF+
Subjt:  PLTYSKPYTKRIDNLRMPTGYQPPKFQQFDGKGNSKLHVAHFVETCKNAGTRGDLLVKQFVRTLKGNAFD
XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]3.0e-6376.47Show/hide
Query:  MTDVDPDERMAEMERKTNLLMKVVEERDLEIAYLKSQVQNKETVESSQTPVVRNDDKGKNIIQKEQPPQPA-SVASLSVQQLQDMIISSIRAQYGGPGQN
        M DV  +  MAEMERK NLLMKVV+ERD EIA LK Q+Q +ET ESSQTPVV+ DDKGKN++Q+ QP Q + SVASLSVQQLQDMI SSIRAQYGGP Q 
Subjt:  MTDVDPDERMAEMERKTNLLMKVVEERDLEIAYLKSQVQNKETVESSQTPVVRNDDKGKNIIQKEQPPQPA-SVASLSVQQLQDMIISSIRAQYGGPGQN

Query:  PLTYSKPYTKRIDNLRMPTGYQPPKFQQFDGKGNSKLHVAHFVETCKNAGTRGDLLVKQFVRTLKGNAFD
           YSKPYTKRIDNLRMP GYQPPKFQQFDGKGN K HVAHFVETC+NAG+RGD LV+QFVR+LKGNAF+
Subjt:  PLTYSKPYTKRIDNLRMPTGYQPPKFQQFDGKGNSKLHVAHFVETCKNAGTRGDLLVKQFVRTLKGNAFD
XP_031740568.1 uncharacterized protein LOC116403508 [Cucumis sativus]3.0e-6376.47Show/hide
Query:  MTDVDPDERMAEMERKTNLLMKVVEERDLEIAYLKSQVQNKETVESSQTPVVRNDDKGKNIIQKEQPPQPA-SVASLSVQQLQDMIISSIRAQYGGPGQN
        M DV  +  MAEMERK NLLMKVV+ERD EIA LK Q+Q +ET ESSQTPVV+ DDKGKN++Q+ QP Q + SVASLSVQQLQDMI SSIRAQYGGP Q 
Subjt:  MTDVDPDERMAEMERKTNLLMKVVEERDLEIAYLKSQVQNKETVESSQTPVVRNDDKGKNIIQKEQPPQPA-SVASLSVQQLQDMIISSIRAQYGGPGQN

Query:  PLTYSKPYTKRIDNLRMPTGYQPPKFQQFDGKGNSKLHVAHFVETCKNAGTRGDLLVKQFVRTLKGNAFD
           YSKPYTKRIDNLRMP GYQPPKFQQFDGKGN K HVAHFVETC+NAG+RGD LV+QFVR+LKGNAF+
Subjt:  PLTYSKPYTKRIDNLRMPTGYQPPKFQQFDGKGNSKLHVAHFVETCKNAGTRGDLLVKQFVRTLKGNAFD
XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]3.0e-6376.47Show/hide
Query:  MTDVDPDERMAEMERKTNLLMKVVEERDLEIAYLKSQVQNKETVESSQTPVVRNDDKGKNIIQKEQPPQPA-SVASLSVQQLQDMIISSIRAQYGGPGQN
        M DV  +  MAEMERK NLLMKVV+ERD EIA LK Q+Q +ET ESSQTPVV+ DDKGKN++Q+ QP Q + SVASLSVQQLQDMI SSIRAQYGGP Q 
Subjt:  MTDVDPDERMAEMERKTNLLMKVVEERDLEIAYLKSQVQNKETVESSQTPVVRNDDKGKNIIQKEQPPQPA-SVASLSVQQLQDMIISSIRAQYGGPGQN

Query:  PLTYSKPYTKRIDNLRMPTGYQPPKFQQFDGKGNSKLHVAHFVETCKNAGTRGDLLVKQFVRTLKGNAFD
           YSKPYTKRIDNLRMP GYQPPKFQQFDGKGN K HVAHFVETC+NAG+RGD LV+QFVR+LKGNAF+
Subjt:  PLTYSKPYTKRIDNLRMPTGYQPPKFQQFDGKGNSKLHVAHFVETCKNAGTRGDLLVKQFVRTLKGNAFD
XP_031744658.1 uncharacterized protein LOC116405107 [Cucumis sativus]3.0e-6376.47Show/hide
Query:  MTDVDPDERMAEMERKTNLLMKVVEERDLEIAYLKSQVQNKETVESSQTPVVRNDDKGKNIIQKEQPPQPA-SVASLSVQQLQDMIISSIRAQYGGPGQN
        M DV  +  MAEMERK NLLMKVV+ERD EIA LK Q+Q +ET ESSQTPVV+ DDKGKN++Q+ QP Q + SVASLSVQQLQDMI SSIRAQYGGP Q 
Subjt:  MTDVDPDERMAEMERKTNLLMKVVEERDLEIAYLKSQVQNKETVESSQTPVVRNDDKGKNIIQKEQPPQPA-SVASLSVQQLQDMIISSIRAQYGGPGQN

Query:  PLTYSKPYTKRIDNLRMPTGYQPPKFQQFDGKGNSKLHVAHFVETCKNAGTRGDLLVKQFVRTLKGNAFD
           YSKPYTKRIDNLRMP GYQPPKFQQFDGKGN K HVAHFVETC+NAG+RGD LV+QFVR+LKGNAF+
Subjt:  PLTYSKPYTKRIDNLRMPTGYQPPKFQQFDGKGNSKLHVAHFVETCKNAGTRGDLLVKQFVRTLKGNAFD
TrEMBL top hitse value%identityAlignment
A0A5A7UXF0 Ty3-gypsy retrotransposon protein5.6e-6070Show/hide
Query:  MTDVDPDE-RMAEMERKTNLLMKVVEERDLEIAYLKSQVQNKETVESSQTPVVRNDDKGKNIIQKEQPPQPASVASLSVQQLQDMIISSIRAQYGGPGQN
        +T+VD  E RMAE+E+K N+LMKVVEERD EIA+LK+ +++++  ESS   +V+N DKGK ++Q+ QP    S+ASLSVQQLQ+MI SSI+ QYGGP Q 
Subjt:  MTDVDPDE-RMAEMERKTNLLMKVVEERDLEIAYLKSQVQNKETVESSQTPVVRNDDKGKNIIQKEQPPQPASVASLSVQQLQDMIISSIRAQYGGPGQN

Query:  PLTYSKPYTKRIDNLRMPTGYQPPKFQQFDGKGNSKLHVAHFVETCKNAGTRGDLLVKQFVRTLKGNAFD
           YSKPYTKRIDNLRMP GYQPPKFQQFDGKGN K HVAHF+ETC+ AGTRGDLLVKQFVRTLKGNAFD
Subjt:  PLTYSKPYTKRIDNLRMPTGYQPPKFQQFDGKGNSKLHVAHFVETCKNAGTRGDLLVKQFVRTLKGNAFD
A0A5A7VDN4 Ty3-gypsy retrotransposon protein2.5e-6071.76Show/hide
Query:  MTDVDPDERMAEMERKTNLLMKVVEERDLEIAYLKSQVQNKETVESSQTPVVRNDDKGKNIIQKEQPPQPA-SVASLSVQQLQDMIISSIRAQYGGPGQN
        M D+  +  MAEMERK N LMK VEERD EI  L+ Q++ +ET ESSQTPVV+  DKGKN++QK QP Q + SVASLSVQQLQDMI +SIRAQYGGP   
Subjt:  MTDVDPDERMAEMERKTNLLMKVVEERDLEIAYLKSQVQNKETVESSQTPVVRNDDKGKNIIQKEQPPQPA-SVASLSVQQLQDMIISSIRAQYGGPGQN

Query:  PLTYSKPYTKRIDNLRMPTGYQPPKFQQFDGKGNSKLHVAHFVETCKNAGTRGDLLVKQFVRTLKGNAFD
           YSKPYTKRIDNLRMP GYQPPKFQQFDGKGN K H+AHFVETC+NAG+RGD LV+QFVR+LKGNAF+
Subjt:  PLTYSKPYTKRIDNLRMPTGYQPPKFQQFDGKGNSKLHVAHFVETCKNAGTRGDLLVKQFVRTLKGNAFD
A0A5D3BZH8 Ty3-gypsy retrotransposon protein7.4e-6074.71Show/hide
Query:  MTDVDPDERMAEMERKTNLLMKVVEERDLEIAYLKSQVQNKETVESSQTPVVRNDDKGKNIIQKEQPPQPA-SVASLSVQQLQDMIISSIRAQYGGPGQN
        M DV  +  MAEMERK N LMKVVEERD EIA LK Q++  ET ESSQTPVV+  DKGKN++Q+ QP Q + SVASLSVQQLQDMI +SIRAQYGGP Q 
Subjt:  MTDVDPDERMAEMERKTNLLMKVVEERDLEIAYLKSQVQNKETVESSQTPVVRNDDKGKNIIQKEQPPQPA-SVASLSVQQLQDMIISSIRAQYGGPGQN

Query:  PLTYSKPYTKRIDNLRMPTGYQPPKFQQFDGKGNSKLHVAHFVETCKNAGTRGDLLVKQFVRTLKGNAFD
           YSKPYTKRIDNLRMP GYQPPKFQQFDGKGN K H+A FVETC+NA +RGD LVKQFVRTLKGNAFD
Subjt:  PLTYSKPYTKRIDNLRMPTGYQPPKFQQFDGKGNSKLHVAHFVETCKNAGTRGDLLVKQFVRTLKGNAFD
A0A5D3D4X3 Ty3-gypsy retrotransposon protein3.3e-6070.59Show/hide
Query:  MTDVDPDE-RMAEMERKTNLLMKVVEERDLEIAYLKSQVQNKETVESSQTPVVRNDDKGKNIIQKEQPPQPASVASLSVQQLQDMIISSIRAQYGGPGQN
        +TDVD  E RMAE+E+K N+LMKVVEERD EIA+LK+ +++++  ESS    V+N DKGK ++Q+ QP    S+ASLSVQQLQ+MI SSI+ QYGGP Q 
Subjt:  MTDVDPDE-RMAEMERKTNLLMKVVEERDLEIAYLKSQVQNKETVESSQTPVVRNDDKGKNIIQKEQPPQPASVASLSVQQLQDMIISSIRAQYGGPGQN

Query:  PLTYSKPYTKRIDNLRMPTGYQPPKFQQFDGKGNSKLHVAHFVETCKNAGTRGDLLVKQFVRTLKGNAFD
           YSKPYTKRIDNLRMP GYQPPKFQQFDGKGN K HVAHF+ETC+ AGTRGDLLVKQFVRTLKGNAFD
Subjt:  PLTYSKPYTKRIDNLRMPTGYQPPKFQQFDGKGNSKLHVAHFVETCKNAGTRGDLLVKQFVRTLKGNAFD
A0A5D3DIN4 Ty3-gypsy retrotransposon protein7.4e-6071.76Show/hide
Query:  MTDVDPDERMAEMERKTNLLMKVVEERDLEIAYLKSQVQNKETVESSQTPVVRNDDKGKNIIQKEQPPQPA-SVASLSVQQLQDMIISSIRAQYGGPGQN
        M DV  +  M EME+K N LMKVVEERD EIA LK Q++  ET ESS+TPVV+  DKGKN++Q+ QP Q + SVASLSVQQLQDMI++SIRAQYGGP Q 
Subjt:  MTDVDPDERMAEMERKTNLLMKVVEERDLEIAYLKSQVQNKETVESSQTPVVRNDDKGKNIIQKEQPPQPA-SVASLSVQQLQDMIISSIRAQYGGPGQN

Query:  PLTYSKPYTKRIDNLRMPTGYQPPKFQQFDGKGNSKLHVAHFVETCKNAGTRGDLLVKQFVRTLKGNAFD
           YSKPYTKRIDNLRMP GYQPPKFQQFDGKGN K H+AHFVE C+NAG+RGD LV+QFVR+LKGNAF+
Subjt:  PLTYSKPYTKRIDNLRMPTGYQPPKFQQFDGKGNSKLHVAHFVETCKNAGTRGDLLVKQFVRTLKGNAFD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGATGTGGACCCTGATGAAAGAATGGCAGAGATGGAAAGAAAGACCAACCTCTTGATGAAGGTAGTAGAAGAAAGAGATCTTGAAATCGCCTATCTCAAAAGCCA
AGTCCAAAACAAAGAAACGGTTGAATCTAGCCAAACCCCTGTAGTAAGAAACGACGACAAAGGGAAAAATATCATCCAAAAGGAGCAACCGCCTCAACCAGCTTCAGTTG
CTTCTTTATCCGTCCAACAACTACAGGACATGATCATAAGTTCTATTAGAGCTCAATATGGCGGACCCGGTCAAAATCCTCTCACGTACTCCAAACCGTACACCAAGAGG
ATTGACAATTTGAGGATGCCCACAGGGTACCAACCTCCAAAGTTCCAACAGTTTGACGGGAAGGGCAACTCAAAGCTACACGTTGCACATTTCGTCGAAACCTGCAAAAA
TGCAGGGACACGTGGTGACCTCCTGGTCAAGCAATTTGTGCGTACCTTAAAAGGAAATGCTTTTGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTGATGTGGACCCTGATGAAAGAATGGCAGAGATGGAAAGAAAGACCAACCTCTTGATGAAGGTAGTAGAAGAAAGAGATCTTGAAATCGCCTATCTCAAAAGCCA
AGTCCAAAACAAAGAAACGGTTGAATCTAGCCAAACCCCTGTAGTAAGAAACGACGACAAAGGGAAAAATATCATCCAAAAGGAGCAACCGCCTCAACCAGCTTCAGTTG
CTTCTTTATCCGTCCAACAACTACAGGACATGATCATAAGTTCTATTAGAGCTCAATATGGCGGACCCGGTCAAAATCCTCTCACGTACTCCAAACCGTACACCAAGAGG
ATTGACAATTTGAGGATGCCCACAGGGTACCAACCTCCAAAGTTCCAACAGTTTGACGGGAAGGGCAACTCAAAGCTACACGTTGCACATTTCGTCGAAACCTGCAAAAA
TGCAGGGACACGTGGTGACCTCCTGGTCAAGCAATTTGTGCGTACCTTAAAAGGAAATGCTTTTGACTAG
Protein sequenceShow/hide protein sequence
MTDVDPDERMAEMERKTNLLMKVVEERDLEIAYLKSQVQNKETVESSQTPVVRNDDKGKNIIQKEQPPQPASVASLSVQQLQDMIISSIRAQYGGPGQNPLTYSKPYTKR
IDNLRMPTGYQPPKFQQFDGKGNSKLHVAHFVETCKNAGTRGDLLVKQFVRTLKGNAFD