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Tan0010828 (gene) of Snake gourd v1 genome

Gene IDTan0010828
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionAvrRpt-cleavage domain-containing protein
Genome locationLG07:72344165..72346030
RNA-Seq ExpressionTan0010828
SyntenyTan0010828
Gene Ontology termsNA
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606311.1 RPM1-interacting protein 4, partial [Cucurbita argyrosperma subsp. sororia]8.2e-2182.54Show/hide
Query:  MADKEAAVPKFGEWNDRDATPPDNYTAIFTRVREERQDQGGRASTLPRNGNSPTNQNHEHNQK
        MADKE AVPKFGEWNDRDATPPDNYTAIFT+VREERQDQG R  TLP+N N P NQN E NQK
Subjt:  MADKEAAVPKFGEWNDRDATPPDNYTAIFTRVREERQDQGGRASTLPRNGNSPTNQNHEHNQK

KAG7036250.1 hypothetical protein SDJN02_03052 [Cucurbita argyrosperma subsp. argyrosperma]1.3e-2176.81Show/hide
Query:  MADKEAAVPKFGEWNDRDATPPDNYTAIFTRVREERQDQGGRASTLPRNGNSPTNQNHEHNQKVIEELS
        MADKE AVPKFGEWNDRDATPPDNYTAIFT+VREERQDQG R  TLP+N N P NQN E NQKV   ++
Subjt:  MADKEAAVPKFGEWNDRDATPPDNYTAIFTRVREERQDQGGRASTLPRNGNSPTNQNHEHNQKVIEELS

XP_022980362.1 uncharacterized protein LOC111479753 isoform X1 [Cucurbita maxima]2.8e-0547.54Show/hide
Query:  DKEAAVPKFGEWNDRDATPPDNYTAIFTRVREERQDQGGRASTLPRNGNSPTNQNHEHNQK
        D+ A VPKFG+W++ D T  +NY+ IFTRVREERQ + G +  +  N +S T++N   N K
Subjt:  DKEAAVPKFGEWNDRDATPPDNYTAIFTRVREERQDQGGRASTLPRNGNSPTNQNHEHNQK

XP_022980364.1 RPM1-interacting protein 4-like isoform X2 [Cucurbita maxima]2.8e-0547.54Show/hide
Query:  DKEAAVPKFGEWNDRDATPPDNYTAIFTRVREERQDQGGRASTLPRNGNSPTNQNHEHNQK
        D+ A VPKFG+W++ D T  +NY+ IFTRVREERQ + G +  +  N +S T++N   N K
Subjt:  DKEAAVPKFGEWNDRDATPPDNYTAIFTRVREERQDQGGRASTLPRNGNSPTNQNHEHNQK

XP_038888923.1 RPM1-interacting protein 4-like [Benincasa hispida]2.6e-1470.31Show/hide
Query:  MADKEAAVPKFGEWNDRDATPPDNYTAIFTRVREERQDQGGRASTLPRN-GNSPTNQNHEHNQK
        MAD EA VPKFGEW+DRDA  P+NYTAIF +VRE RQ+ G RA T PR+  NS  NQNHEHNQK
Subjt:  MADKEAAVPKFGEWNDRDATPPDNYTAIFTRVREERQDQGGRASTLPRN-GNSPTNQNHEHNQK

TrEMBL top hitse value%identityAlignment
A0A0A0L950 AvrRpt-cleavage domain-containing protein2.8e-1160.29Show/hide
Query:  MADKEAAVPKFGEWNDRDATPPDNYTAIFTRVREERQDQGGRASTLPRNGNSPTNQNHEHNQKVIEEL
        MAD E AVPKFGEW+D DA  P+NYTAIF +VREERQDQ  R  T  R  +S  +QNHE NQK+ +++
Subjt:  MADKEAAVPKFGEWNDRDATPPDNYTAIFTRVREERQDQGGRASTLPRNGNSPTNQNHEHNQKVIEEL

A0A1S3E0Y8 uncharacterized protein LOC101493917 isoform X16.8e-0550.82Show/hide
Query:  DKEAAVPKFGEWNDRDATPPDNYTAIFTRVREERQDQGGRASTLPRNGNSPTNQNHEHNQK
        DK AAVPKFGEW++ D T  D YT IF +VREE+    G A   P NG S   +N   N K
Subjt:  DKEAAVPKFGEWNDRDATPPDNYTAIFTRVREERQDQGGRASTLPRNGNSPTNQNHEHNQK

A0A6J1EFK8 RPM1-interacting protein 4-like isoform X16.8e-0545.9Show/hide
Query:  DKEAAVPKFGEWNDRDATPPDNYTAIFTRVREERQDQGGRASTLPRNGNSPTNQNHEHNQK
        D+ A VPKFG+W++ D T  +NY+ IFTRVREERQ + G +  +  N +S T++    N K
Subjt:  DKEAAVPKFGEWNDRDATPPDNYTAIFTRVREERQDQGGRASTLPRNGNSPTNQNHEHNQK

A0A6J1IR61 uncharacterized protein LOC111479753 isoform X11.4e-0547.54Show/hide
Query:  DKEAAVPKFGEWNDRDATPPDNYTAIFTRVREERQDQGGRASTLPRNGNSPTNQNHEHNQK
        D+ A VPKFG+W++ D T  +NY+ IFTRVREERQ + G +  +  N +S T++N   N K
Subjt:  DKEAAVPKFGEWNDRDATPPDNYTAIFTRVREERQDQGGRASTLPRNGNSPTNQNHEHNQK

A0A6J1IZ29 RPM1-interacting protein 4-like isoform X21.4e-0547.54Show/hide
Query:  DKEAAVPKFGEWNDRDATPPDNYTAIFTRVREERQDQGGRASTLPRNGNSPTNQNHEHNQK
        D+ A VPKFG+W++ D T  +NY+ IFTRVREERQ + G +  +  N +S T++N   N K
Subjt:  DKEAAVPKFGEWNDRDATPPDNYTAIFTRVREERQDQGGRASTLPRNGNSPTNQNHEHNQK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein2.0e-0438.1Show/hide
Query:  MADKEAAVPKFGEWNDRDATPPDNYTAIFTRVREERQDQGGRASTLPRNGNSPTNQNHEHNQK
        MADK   +PKFGEW+  D +  + +T IF + R E+  +GG  S  P       N+N E  +K
Subjt:  MADKEAAVPKFGEWNDRDATPPDNYTAIFTRVREERQDQGGRASTLPRNGNSPTNQNHEHNQK

AT3G25070.1 RPM1 interacting protein 41.5e-0436.36Show/hide
Query:  DKEAAVPKFGEWNDRDATPPDNYTAIFTRVREERQDQGGRASTLPRNGNSPTNQN
        +K   VPKFG+W++ + +  D YT IF +VREER       + +  +  +PT+Q+
Subjt:  DKEAAVPKFGEWNDRDATPPDNYTAIFTRVREERQDQGGRASTLPRNGNSPTNQN

AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein5.7e-0440Show/hide
Query:  MADKEAAVPKFGEWNDRDATPPDNYTAIFTRVREERQDQG
        M+DK   +PKFGEW+  D    + +T IF + R+E++  G
Subjt:  MADKEAAVPKFGEWNDRDATPPDNYTAIFTRVREERQDQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGATAAGGAAGCTGCGGTTCCAAAATTTGGCGAATGGAACGACAGGGATGCTACACCACCGGACAACTACACGGCTATATTCACCAGGGTGCGGGAAGAGAGACA
AGATCAGGGAGGAAGAGCATCGACGCTGCCACGGAACGGTAACAGCCCAACAAACCAAAATCATGAACACAATCAAAAGGTAATTGAAGAACTCTCTTCCATTTCTCAGC
CAACCACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGATAAGGAAGCTGCGGTTCCAAAATTTGGCGAATGGAACGACAGGGATGCTACACCACCGGACAACTACACGGCTATATTCACCAGGGTGCGGGAAGAGAGACA
AGATCAGGGAGGAAGAGCATCGACGCTGCCACGGAACGGTAACAGCCCAACAAACCAAAATCATGAACACAATCAAAAGGTAATTGAAGAACTCTCTTCCATTTCTCAGC
CAACCACATGA
Protein sequenceShow/hide protein sequence
MADKEAAVPKFGEWNDRDATPPDNYTAIFTRVREERQDQGGRASTLPRNGNSPTNQNHEHNQKVIEELSSISQPTT