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Tan0010840 (gene) of Snake gourd v1 genome

Gene IDTan0010840
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGibberellin regulated protein
Genome locationLG11:12544995..12546455
RNA-Seq ExpressionTan0010840
SyntenyTan0010840
Gene Ontology termsGO:0009740 - gibberellic acid mediated signaling pathway (biological process)
GO:0009751 - response to salicylic acid (biological process)
GO:0010286 - heat acclimation (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR003854 - Gibberellin regulated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON42793.1 Gibberellin regulated protein [Parasponia andersonii]4.3e-3574.49Show/hide
Query:  MAANRPY-IFFILFSMLFFLTFSLHLAEA--ASKFRPSDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP
        MAA RPY    +L S+LF +TFS ++AEA    K RPSDCKP+C YRCSATSH+KPCMFFCQKCC  CLCVPPGTYGNKQVCPCYNNWKT++GGPKCP
Subjt:  MAANRPY-IFFILFSMLFFLTFSLHLAEA--ASKFRPSDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP

XP_008460555.1 PREDICTED: protein RSI-1-like [Cucumis melo]4.1e-3885.23Show/hide
Query:  FFILFSMLFFLTFS-LHLAEAASKFRPSDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP
        FF LFS+LF LT S LH AE AS  RPSDCKP+C+YRCSATSHRKPCMFFCQKCC KCLCVPPGTYGNKQ CPCYNNWKTQQGGPKCP
Subjt:  FFILFSMLFFLTFS-LHLAEAASKFRPSDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP

XP_011656217.1 protein RSI-1-like [Cucumis sativus]4.6e-3779.17Show/hide
Query:  MAANRPYIFFILFSMLFFLTFS-LHLAEAASKFRPSDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP
        MA++  Y FF LFS+LF LT S LHLAE A   RPSDCKP+C+YRCSAT+HRKPCMFFCQKCC KCLCVP GTYGNKQ CPCYNNWKTQQGGPKCP
Subjt:  MAANRPYIFFILFSMLFFLTFS-LHLAEAASKFRPSDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP

XP_022141399.1 protein RSI-1-like [Momordica charantia]1.4e-4185.26Show/hide
Query:  MAANRPYIFFILFSMLFFLTFSLHLAEAASKFRPSDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP
        MA  RPYI F +   LFFLT SLHLAEAAS F PSDCKPRC+YRCSATSH+KPCMFFCQKCC KCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP
Subjt:  MAANRPYIFFILFSMLFFLTFSLHLAEAASKFRPSDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP

XP_038876048.1 protein RSI-1-like [Benincasa hispida]2.8e-4286.32Show/hide
Query:  MAANRPYIFFILFSMLFFLTFSLHLAEAASKFRPSDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP
        MA++RPYI    F +LFFLT SLHLAEAAS  RPSDCKP+CNYRCSATSHRKPCMFFCQKCC KCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP
Subjt:  MAANRPYIFFILFSMLFFLTFSLHLAEAASKFRPSDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP

TrEMBL top hitse value%identityAlignment
A0A1S3CD72 protein RSI-1-like2.0e-3885.23Show/hide
Query:  FFILFSMLFFLTFS-LHLAEAASKFRPSDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP
        FF LFS+LF LT S LH AE AS  RPSDCKP+C+YRCSATSHRKPCMFFCQKCC KCLCVPPGTYGNKQ CPCYNNWKTQQGGPKCP
Subjt:  FFILFSMLFFLTFS-LHLAEAASKFRPSDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP

A0A2N9FAY6 Uncharacterized protein2.1e-3574.74Show/hide
Query:  ANRPY-IFFILFSMLFFLTFSLHLAE-AASKFRPSDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP
        A RPY  FF+LFS+L  +TFS H+AE + +K R SDCKP+C YRCSATSH+KPCMFFC KCC+KCLCVPPGTYGNKQVCPCYNNWKT++G PKCP
Subjt:  ANRPY-IFFILFSMLFFLTFSLHLAE-AASKFRPSDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP

A0A2P5B1Z1 Gibberellin regulated protein2.1e-3574.49Show/hide
Query:  MAANRPY-IFFILFSMLFFLTFSLHLAEA--ASKFRPSDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP
        MAA RPY    +L S+LF +TFS ++AEA    K RPSDCKP+C YRCSATSH+KPCMFFCQKCC  CLCVPPGTYGNKQVCPCYNNWKT++GGPKCP
Subjt:  MAANRPY-IFFILFSMLFFLTFSLHLAEA--ASKFRPSDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP

A0A5N6QWU7 Uncharacterized protein2.1e-3580.23Show/hide
Query:  ILFSMLFFLTFS-LHLAEAASKFRPSDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP
        +LFS+LF LTFS +  A + +K RPSDCKP+C YRCSATSH+KPCMFFC KCC+KCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP
Subjt:  ILFSMLFFLTFS-LHLAEAASKFRPSDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP

A0A6J1CII9 protein RSI-1-like6.7e-4285.26Show/hide
Query:  MAANRPYIFFILFSMLFFLTFSLHLAEAASKFRPSDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP
        MA  RPYI F +   LFFLT SLHLAEAAS F PSDCKPRC+YRCSATSH+KPCMFFCQKCC KCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP
Subjt:  MAANRPYIFFILFSMLFFLTFSLHLAEAASKFRPSDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP

SwissProt top hitse value%identityAlignment
P27057 Protein GAST19.6e-3076.92Show/hide
Query:  KFRPSDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP
        +  P DC+P+C YRCS TS++KPCMFFCQKCC KCLCVP GTYGNKQ CPCYNNWKT++GGPKCP
Subjt:  KFRPSDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP

P47926 Protein RSI-14.2e-3372.73Show/hide
Query:  FFILFSM-LFFLTFSLHLAEAASKFRPSDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP
        F +L SM L  LTFS ++ E  +K RP+DCKPRC YRCSATSH+KPCMFFCQKCC  CLCVP G YGNKQ CPCYNNWKTQ+G PKCP
Subjt:  FFILFSM-LFFLTFSLHLAEAASKFRPSDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP

Q6GKX7 Gibberellin-regulated protein 124.5e-2752.48Show/hide
Query:  IFFILFSMLFFLTFS-------------LHLAEAASKFRPSDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKC
        + F++ S+LF   FS             +H        +P +C   C YRCSATSHRKPC+FFC KCC KCLCVP GTYG+K+ CPCYNNW T++GGPKC
Subjt:  IFFILFSMLFFLTFS-------------LHLAEAASKFRPSDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKC

Query:  P
        P
Subjt:  P

Q6NMQ7 Gibberellin-regulated protein 61.3e-2660.64Show/hide
Query:  FILFSMLF---FLTFSLHLAEAASKFRPS-----DCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP
        F+L ++LF    LT S         + P       C  +C  RCS T + KPCMFFCQKCC KCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP
Subjt:  FILFSMLF---FLTFSLHLAEAASKFRPS-----DCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP

Q84J95 Gibberellin-regulated protein 52.8e-2958.24Show/hide
Query:  RPYIFFILFSMLFFLTFSLHLAEAASKFRPSDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP
        R  +FF+    L  ++  +  A    K +P  C  +C++RCSATSH+KPCMFFC KCC KCLCVPPGT+GNKQ CPCYNNWKT++G PKCP
Subjt:  RPYIFFILFSMLFFLTFSLHLAEAASKFRPSDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP

Arabidopsis top hitse value%identityAlignment
AT1G74670.1 Gibberellin-regulated family protein9.2e-2860.64Show/hide
Query:  FILFSMLF---FLTFSLHLAEAASKFRPS-----DCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP
        F+L ++LF    LT S         + P       C  +C  RCS T + KPCMFFCQKCC KCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP
Subjt:  FILFSMLF---FLTFSLHLAEAASKFRPS-----DCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP

AT2G30810.1 Gibberellin-regulated family protein3.2e-2852.48Show/hide
Query:  IFFILFSMLFFLTFS-------------LHLAEAASKFRPSDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKC
        + F++ S+LF   FS             +H        +P +C   C YRCSATSHRKPC+FFC KCC KCLCVP GTYG+K+ CPCYNNW T++GGPKC
Subjt:  IFFILFSMLFFLTFS-------------LHLAEAASKFRPSDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKC

Query:  P
        P
Subjt:  P

AT3G02885.1 GAST1 protein homolog 52.0e-3058.24Show/hide
Query:  RPYIFFILFSMLFFLTFSLHLAEAASKFRPSDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP
        R  +FF+    L  ++  +  A    K +P  C  +C++RCSATSH+KPCMFFC KCC KCLCVPPGT+GNKQ CPCYNNWKT++G PKCP
Subjt:  RPYIFFILFSMLFFLTFSLHLAEAASKFRPSDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP

AT3G10185.1 Gibberellin-regulated family protein2.1e-2754.37Show/hide
Query:  MAANRPYIFFILFSMLFFLTFSLHL-------AEAASKFRP-SDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGP
        MA     I F +  +   L+  +H         E  S   P  +C PRC  RCS T ++KPC+FFC KCC KCLCVPPGTYGNKQVCPCYNNWKT+ GGP
Subjt:  MAANRPYIFFILFSMLFFLTFSLHL-------AEAASKFRP-SDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGP

Query:  KCP
        KCP
Subjt:  KCP

AT5G15230.2 GAST1 protein homolog 43.1e-2367.21Show/hide
Query:  SDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP
        + C   C+ RC  T + K C+ FC KCC KCLCVPPG YGNKQVC CYNNWKTQ+GGPKCP
Subjt:  SDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCCAATCGTCCGTACATCTTCTTCATTCTCTTCTCTATGCTCTTTTTTCTCACTTTCTCTCTGCATTTAGCTGAAGCTGCTTCAAAATTTCGTCCTTCAGATTG
CAAGCCAAGGTGCAATTATCGATGCTCGGCGACGTCGCACAGGAAGCCATGTATGTTCTTCTGCCAAAAATGTTGTACAAAATGCCTGTGTGTGCCTCCAGGTACCTATG
GCAACAAGCAAGTTTGTCCTTGCTACAATAACTGGAAGACTCAGCAAGGAGGTCCCAAATGCCCTTGA
mRNA sequenceShow/hide mRNA sequence
TTCACATTATAATAACATCAAAATGGCAGCCAATCGTCCGTACATCTTCTTCATTCTCTTCTCTATGCTCTTTTTTCTCACTTTCTCTCTGCATTTAGCTGAAGCTGCTT
CAAAATTTCGTCCTTCAGATTGCAAGCCAAGGTGCAATTATCGATGCTCGGCGACGTCGCACAGGAAGCCATGTATGTTCTTCTGCCAAAAATGTTGTACAAAATGCCTG
TGTGTGCCTCCAGGTACCTATGGCAACAAGCAAGTTTGTCCTTGCTACAATAACTGGAAGACTCAGCAAGGAGGTCCCAAATGCCCTTGAAATTCATTGCTATCATCATA
TTCTAAAAGATCATAGATCTCTATAATTACAGCTTTTTTTTGCCTACATTATTCAGTATTAATTTTTGTATCTCTGAAGATGATCACTAAATATATTTAGTTCTTGATTC
TAGCTTTCCTTGAGTTTTTCTAAAAATACTTTTTTTGCTCTTTCTTTTCTTTGTTTTGTGGGAGATATGAGACAAATGCCTGGCTCTCGAGTCTTGTACCAACTTTGACC
ATGGATGACAAATGGTAGCTTTCCCCATTGTTTAAGTTGTAATCAAAGATTATGTGAAGTTTAATCATGGTGTATAAGATACCTACACACCGA
Protein sequenceShow/hide protein sequence
MAANRPYIFFILFSMLFFLTFSLHLAEAASKFRPSDCKPRCNYRCSATSHRKPCMFFCQKCCTKCLCVPPGTYGNKQVCPCYNNWKTQQGGPKCP