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Tan0010842 (gene) of Snake gourd v1 genome

Gene IDTan0010842
OrganismTrichosanthes anguina (Snake gourd v1)
Description10 kDa chaperonin
Genome locationLG11:17546807..17547892
RNA-Seq ExpressionTan0010842
SyntenyTan0010842
Gene Ontology termsGO:0051085 - chaperone cofactor-dependent protein refolding (biological process)
GO:0005759 - mitochondrial matrix (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051082 - unfolded protein binding (molecular function)
GO:0051087 - chaperone binding (molecular function)
InterPro domainsIPR011032 - GroES-like superfamily
IPR020818 - GroES chaperonin family
IPR037124 - GroES chaperonin superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAE6062116.1 unnamed protein product [Arabidopsis arenosa]8.5e-1288.1Show/hide
Query:  KVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLGTL
        K+VPV VKEGDTVLLPEYGGT VKLGEKE+HLFRDED+LGTL
Subjt:  KVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLGTL
CAF2108881.1 unnamed protein product, partial [Brassica napus]1.1e-1185.71Show/hide
Query:  KVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLGTL
        K++PV VKEGDTVLLPEYGGT VKLGEKE+HLFRDED+LGTL
Subjt:  KVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLGTL
KAG7558392.1 GroES-like superfamily [Arabidopsis thaliana x Arabidopsis arenosa]8.5e-1288.1Show/hide
Query:  KVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLGTL
        K+VPV VKEGDTVLLPEYGGT VKLGEKE+HLFRDED+LGTL
Subjt:  KVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLGTL
KAG7563208.1 GroES chaperonin family [Arabidopsis suecica]8.5e-1288.1Show/hide
Query:  KVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLGTL
        K+VPV VKEGDTVLLPEYGGT VKLGEKE+HLFRDED+LGTL
Subjt:  KVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLGTL
XP_002282838.1 PREDICTED: 10 kDa chaperonin, mitochondrial [Vitis vinifera]1.1e-1183.33Show/hide
Query:  KVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLGTL
        K++PVGVKEGDTVLLPEYGGT VKLG+KE+HL+RDED+LGTL
Subjt:  KVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLGTL
TrEMBL top hitse value%identityAlignment
A0A3P6FDZ7 Uncharacterized protein5.4e-1285.71Show/hide
Query:  KVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLGTL
        K++PV VKEGDTVLLPEYGGT VKLGEKE+HLFRDED+LGTL
Subjt:  KVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLGTL
A0A3P6G9U0 Uncharacterized protein5.4e-1285.71Show/hide
Query:  KVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLGTL
        K++PV VKEGDTVLLPEYGGT VKLGEKE+HLFRDED+LGTL
Subjt:  KVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLGTL
A0A5N6LRM1 Uncharacterized protein5.4e-1285.71Show/hide
Query:  KVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLGTL
        KV+PV VKEGDTVLLP+YGGT VKLGEKE+HLFRDED+LGTL
Subjt:  KVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLGTL
D7TQS3 Uncharacterized protein5.4e-1283.33Show/hide
Query:  KVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLGTL
        K++PVGVKEGDTVLLPEYGGT VKLG+KE+HL+RDED+LGTL
Subjt:  KVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLGTL
M4DJJ9 Uncharacterized protein5.4e-1285.71Show/hide
Query:  KVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLGTL
        K++PV VKEGDTVLLPEYGGT VKLGEKE+HLFRDED+LGTL
Subjt:  KVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLGTL
SwissProt top hitse value%identityAlignment
P34893 10 kDa chaperonin, mitochondrial5.5e-1483.33Show/hide
Query:  KVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLGTL
        K++PV VKEGDTVLLPEYGGT VKLGE E+HLFRDED+LGTL
Subjt:  KVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLGTL
P61603 10 kDa heat shock protein, mitochondrial3.8e-0762.5Show/hide
Query:  KVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLG
        ++ PV VK GD VLLPEYGGT V L +K++ LFRD D+LG
Subjt:  KVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLG
P61604 10 kDa heat shock protein, mitochondrial3.8e-0762.5Show/hide
Query:  KVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLG
        ++ PV VK GD VLLPEYGGT V L +K++ LFRD D+LG
Subjt:  KVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLG
Q64433 10 kDa heat shock protein, mitochondrial2.3e-0762.5Show/hide
Query:  KVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLG
        ++ PV VK GD VLLPEYGGT V L +K++ LFRD D+LG
Subjt:  KVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLG
Q96539 10 kDa chaperonin1.5e-1485.71Show/hide
Query:  KVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLGTL
        K++PV VKEGDTVLLPEYGGT VKLGEKE+HLFRDED+LGTL
Subjt:  KVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLGTL
Arabidopsis top hitse value%identityAlignment
AT1G14980.1 chaperonin 103.9e-1583.33Show/hide
Query:  KVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLGTL
        K++PV VKEGDTVLLPEYGGT VKLGE E+HLFRDED+LGTL
Subjt:  KVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLGTL
AT1G23100.1 GroES-like family protein6.9e-1273.17Show/hide
Query:  VVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLGTL
        ++PV VKEGD VLLPE+GGT VKLGEKEF L+RDED++ TL
Subjt:  VVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLGTL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGAATCTCCGAAAGGTCTAAAACACAGACACGTCTTGATCGAGAAAATTGTTTCTCCTTCCAAAACCTCCGCTGGGCATTCTTCTCCCCGAGAGTTCCACCAAG
GTATTTTCAACGTAGCATTCATTTTCTCTATAAAGTCGTTCCGGTCGGTGTGAAAGAAGGTGATACTGTTCTTTTGCCTGAATATGGAGGCACGCTGGTGAAGCTTGGAG
AGAAAGAGTTCCATTTGTTTAGAGATGAAGACCTTTTGGGAACTCTACAATTGATTAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGAATCTCCGAAAGGTCTAAAACACAGACACGTCTTGATCGAGAAAATTGTTTCTCCTTCCAAAACCTCCGCTGGGCATTCTTCTCCCCGAGAGTTCCACCAAG
GTATTTTCAACGTAGCATTCATTTTCTCTATAAAGTCGTTCCGGTCGGTGTGAAAGAAGGTGATACTGTTCTTTTGCCTGAATATGGAGGCACGCTGGTGAAGCTTGGAG
AGAAAGAGTTCCATTTGTTTAGAGATGAAGACCTTTTGGGAACTCTACAATTGATTAATTGA
Protein sequenceShow/hide protein sequence
MEGISERSKTQTRLDRENCFSFQNLRWAFFSPRVPPRYFQRSIHFLYKVVPVGVKEGDTVLLPEYGGTLVKLGEKEFHLFRDEDLLGTLQLIN