; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0010890 (gene) of Snake gourd v1 genome

Gene IDTan0010890
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionProtein Ycf2-like
Genome locationLG04:14482491..14485854
RNA-Seq ExpressionTan0010890
SyntenyTan0010890
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038034.1 protein Ycf2-like [Cucumis melo var. makuwa]4.5e-0426.42Show/hide
Query:  DEELDELEDEEEEDGKEQLNQHDRHPNIQTRKDDEDD-----------ATWGQGPKGQSRNIIWALNKEPVVSQGRSNVDDTNEGDDIINEVMRSIDEIK
        +E LD++E++ EED  E LN    +P +  ++DD++D           A   +G  G    +  +        +  S    T E ++ IN+++RSIDE  
Subjt:  DEELDELEDEEEEDGKEQLNQHDRHPNIQTRKDDEDD-----------ATWGQGPKGQSRNIIWALNKEPVVSQGRSNVDDTNEGDDIINEVMRSIDEIK

Query:  IYETLKR--------------NNKGKNILKNDNSIIEIVGQLIEHKEMRIVPKMQPKRHNEINHNIQRDRPTGVQSKGIYIDALCKTYEPSNKEDTTSLT
        IY+ +K+              NN+  N+ +N  ++   +  L   KE   V +   K + E+             S  I+IDAL     P   +   S +
Subjt:  IYETLKR--------------NNKGKNILKNDNSIIEIVGQLIEHKEMRIVPKMQPKRHNEINHNIQRDRPTGVQSKGIYIDALCKTYEPSNKEDTTSLT

Query:  YGPAFDLHLSQA
          P+FDLHL QA
Subjt:  YGPAFDLHLSQA

KAA0041558.1 protein Ycf2-like [Cucumis melo var. makuwa]6.9e-0527.27Show/hide
Query:  DEELDELEDEEEEDGKEQLNQHDRHPNIQTRKDDEDD-----------ATWGQGPKGQSRNIIWALNKEPVVSQGRSNVDDTNEGDDIINEVMRSIDEIK
        +E LD++++++EED  E LN    +P +  ++DD++D           A   +G  G    +  +        +  S    T E D+ IN ++RSIDE  
Subjt:  DEELDELEDEEEEDGKEQLNQHDRHPNIQTRKDDEDD-----------ATWGQGPKGQSRNIIWALNKEPVVSQGRSNVDDTNEGDDIINEVMRSIDEIK

Query:  IYETLKRNNKGKNILKNDNSIIEIVGQLIEHKEMRIVPKMQPKRHNEINHNIQRDRPTGVQSKGIYIDALCKTYEPSNKEDTTSLTYGPAFDLHLSQA
        IY+ +K+    +  L                KE   + K   K + E+             S GI+IDAL +   P  K+   S +   +FDLHLSQA
Subjt:  IYETLKRNNKGKNILKNDNSIIEIVGQLIEHKEMRIVPKMQPKRHNEINHNIQRDRPTGVQSKGIYIDALCKTYEPSNKEDTTSLTYGPAFDLHLSQA

KAA0056668.1 protein Ycf2-like [Cucumis melo var. makuwa]4.5e-0427.83Show/hide
Query:  DEELDELEDEEEEDGKEQLNQHDRHPNIQTRKDDEDDATWG-----------QGPKGQSRNIIWALNKEPVVSQGRSNVDDTNEGDDIINEVMRSIDEIK
        +E LD++E+++EED  E LN    +P +  ++DD +D               +G  G    +  +     V  +       T E D+ IN V+ SIDE  
Subjt:  DEELDELEDEEEEDGKEQLNQHDRHPNIQTRKDDEDDATWG-----------QGPKGQSRNIIWALNKEPVVSQGRSNVDDTNEGDDIINEVMRSIDEIK

Query:  IYETLK----RNNKGKNILKNDNSIIEIV----GQLIEHKEM-RIVPKMQPKRHNEINHNIQRDRPT----------GVQSK-------------GIYID
        IY+ +K    R   G+  L +   ++  V    G++ +  +M +I+ KM    +N+   N++ +RPT          G++S              GI+ID
Subjt:  IYETLK----RNNKGKNILKNDNSIIEIV----GQLIEHKEM-RIVPKMQPKRHNEINHNIQRDRPT----------GVQSK-------------GIYID

Query:  ALCKTYEPSNKEDTTSLTYGPAFDLHLSQA
        AL     P  K    S +  P+FDLHLSQA
Subjt:  ALCKTYEPSNKEDTTSLTYGPAFDLHLSQA

TYK19697.1 protein Ycf2-like [Cucumis melo var. makuwa]6.9e-0527.27Show/hide
Query:  DEELDELEDEEEEDGKEQLNQHDRHPNIQTRKDDEDD-----------ATWGQGPKGQSRNIIWALNKEPVVSQGRSNVDDTNEGDDIINEVMRSIDEIK
        +E LD++++++EED  E LN    +P +  ++DD++D           A   +G  G    +  +        +  S    T E D+ IN ++RSIDE  
Subjt:  DEELDELEDEEEEDGKEQLNQHDRHPNIQTRKDDEDD-----------ATWGQGPKGQSRNIIWALNKEPVVSQGRSNVDDTNEGDDIINEVMRSIDEIK

Query:  IYETLKRNNKGKNILKNDNSIIEIVGQLIEHKEMRIVPKMQPKRHNEINHNIQRDRPTGVQSKGIYIDALCKTYEPSNKEDTTSLTYGPAFDLHLSQA
        IY+ +K+    +  L                KE   + K   K + E+             S GI+IDAL +   P  K+   S +   +FDLHLSQA
Subjt:  IYETLKRNNKGKNILKNDNSIIEIVGQLIEHKEMRIVPKMQPKRHNEINHNIQRDRPTGVQSKGIYIDALCKTYEPSNKEDTTSLTYGPAFDLHLSQA

TYK20568.1 protein Ycf2-like [Cucumis melo var. makuwa]4.5e-0426.42Show/hide
Query:  DEELDELEDEEEEDGKEQLNQHDRHPNIQTRKDDEDD-----------ATWGQGPKGQSRNIIWALNKEPVVSQGRSNVDDTNEGDDIINEVMRSIDEIK
        +E LD++E++ EED  E LN    +P +  ++DD++D           A   +G  G    +  +        +  S    T E ++ IN+++RSIDE  
Subjt:  DEELDELEDEEEEDGKEQLNQHDRHPNIQTRKDDEDD-----------ATWGQGPKGQSRNIIWALNKEPVVSQGRSNVDDTNEGDDIINEVMRSIDEIK

Query:  IYETLKR--------------NNKGKNILKNDNSIIEIVGQLIEHKEMRIVPKMQPKRHNEINHNIQRDRPTGVQSKGIYIDALCKTYEPSNKEDTTSLT
        IY+ +K+              NN+  N+ +N  ++   +  L   KE   V +   K + E+             S  I+IDAL     P   +   S +
Subjt:  IYETLKR--------------NNKGKNILKNDNSIIEIVGQLIEHKEMRIVPKMQPKRHNEINHNIQRDRPTGVQSKGIYIDALCKTYEPSNKEDTTSLT

Query:  YGPAFDLHLSQA
          P+FDLHL QA
Subjt:  YGPAFDLHLSQA

TrEMBL top hitse value%identityAlignment
A0A5A7TF74 Protein Ycf2-like3.3e-0527.27Show/hide
Query:  DEELDELEDEEEEDGKEQLNQHDRHPNIQTRKDDEDD-----------ATWGQGPKGQSRNIIWALNKEPVVSQGRSNVDDTNEGDDIINEVMRSIDEIK
        +E LD++++++EED  E LN    +P +  ++DD++D           A   +G  G    +  +        +  S    T E D+ IN ++RSIDE  
Subjt:  DEELDELEDEEEEDGKEQLNQHDRHPNIQTRKDDEDD-----------ATWGQGPKGQSRNIIWALNKEPVVSQGRSNVDDTNEGDDIINEVMRSIDEIK

Query:  IYETLKRNNKGKNILKNDNSIIEIVGQLIEHKEMRIVPKMQPKRHNEINHNIQRDRPTGVQSKGIYIDALCKTYEPSNKEDTTSLTYGPAFDLHLSQA
        IY+ +K+    +  L                KE   + K   K + E+             S GI+IDAL +   P  K+   S +   +FDLHLSQA
Subjt:  IYETLKRNNKGKNILKNDNSIIEIVGQLIEHKEMRIVPKMQPKRHNEINHNIQRDRPTGVQSKGIYIDALCKTYEPSNKEDTTSLTYGPAFDLHLSQA

A0A5D3D818 Protein Ycf2-like3.3e-0527.27Show/hide
Query:  DEELDELEDEEEEDGKEQLNQHDRHPNIQTRKDDEDD-----------ATWGQGPKGQSRNIIWALNKEPVVSQGRSNVDDTNEGDDIINEVMRSIDEIK
        +E LD++++++EED  E LN    +P +  ++DD++D           A   +G  G    +  +        +  S    T E D+ IN ++RSIDE  
Subjt:  DEELDELEDEEEEDGKEQLNQHDRHPNIQTRKDDEDD-----------ATWGQGPKGQSRNIIWALNKEPVVSQGRSNVDDTNEGDDIINEVMRSIDEIK

Query:  IYETLKRNNKGKNILKNDNSIIEIVGQLIEHKEMRIVPKMQPKRHNEINHNIQRDRPTGVQSKGIYIDALCKTYEPSNKEDTTSLTYGPAFDLHLSQA
        IY+ +K+    +  L                KE   + K   K + E+             S GI+IDAL +   P  K+   S +   +FDLHLSQA
Subjt:  IYETLKRNNKGKNILKNDNSIIEIVGQLIEHKEMRIVPKMQPKRHNEINHNIQRDRPTGVQSKGIYIDALCKTYEPSNKEDTTSLTYGPAFDLHLSQA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGAACGGGATAAGACAACCTACAAGAACAAAAAGACTGAAAAAAAGAGAATTAGGGATGGGGCCACAAAAAAGGAAGCACTGAAGAAGCAAAAAAATAAAGACAC
TACCAAGGTTGAGGATAGCTATGAAGGAGATACTGAAAAGATTGAGGAAGAAGAAATCGAGAATAGAGAATCATCATCAAGTAAAGTGAATGAAGAAGATGAGTCTGAAT
CAAGGATAGAGTCGATCTCAATCATAAAGAGGAATGTAGATGAAGAAAGGAAACAAAAGAGGAAAAAGACTGCAATAAAAAAGGTAATTGTTAAGCAAGAAATTGATAAA
GGCAGGAACTTGAGAAGTAAAGGAAGTCCTGATAAGTCTGTTGGTGAAAATGATGAGGAACTTGATGAATTGGAGGACGAAGAAGAGGAAGATGGCAAAGAGCAATTGAA
TCAGCATGACAGACATCCAAACATACAAACAAGAAAAGATGATGAGGACGACGCTACTTGGGGGCAAGGACCAAAAGGTCAATCAAGAAACATCATTTGGGCTTTGAACA
AAGAGCCAGTTGTGTCACAAGGAAGATCAAATGTGGATGATACAAATGAAGGTGATGATATAATCAACGAAGTGATGAGATCAATAGACGAAATCAAAATATACGAGACA
TTGAAGAGGAACAATAAAGGCAAAAATATCTTGAAGAATGACAATTCAATAATAGAAATAGTGGGTCAATTGATTGAGCATAAGGAAATGCGAATAGTACCAAAGATGCA
ACCTAAGCGTCATAATGAGATCAACCATAACATACAAAGAGATAGACCAACTGGAGTACAATCAAAGGGGATATATATTGATGCTCTATGCAAAACATATGAACCAAGCA
ACAAAGAAGACACAACATCTTTAACATATGGACCTGCGTTCGACCTTCATCTAAGCCAAGCTAAGATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTGAACGGGATAAGACAACCTACAAGAACAAAAAGACTGAAAAAAAGAGAATTAGGGATGGGGCCACAAAAAAGGAAGCACTGAAGAAGCAAAAAAATAAAGACAC
TACCAAGGTTGAGGATAGCTATGAAGGAGATACTGAAAAGATTGAGGAAGAAGAAATCGAGAATAGAGAATCATCATCAAGTAAAGTGAATGAAGAAGATGAGTCTGAAT
CAAGGATAGAGTCGATCTCAATCATAAAGAGGAATGTAGATGAAGAAAGGAAACAAAAGAGGAAAAAGACTGCAATAAAAAAGGTAATTGTTAAGCAAGAAATTGATAAA
GGCAGGAACTTGAGAAGTAAAGGAAGTCCTGATAAGTCTGTTGGTGAAAATGATGAGGAACTTGATGAATTGGAGGACGAAGAAGAGGAAGATGGCAAAGAGCAATTGAA
TCAGCATGACAGACATCCAAACATACAAACAAGAAAAGATGATGAGGACGACGCTACTTGGGGGCAAGGACCAAAAGGTCAATCAAGAAACATCATTTGGGCTTTGAACA
AAGAGCCAGTTGTGTCACAAGGAAGATCAAATGTGGATGATACAAATGAAGGTGATGATATAATCAACGAAGTGATGAGATCAATAGACGAAATCAAAATATACGAGACA
TTGAAGAGGAACAATAAAGGCAAAAATATCTTGAAGAATGACAATTCAATAATAGAAATAGTGGGTCAATTGATTGAGCATAAGGAAATGCGAATAGTACCAAAGATGCA
ACCTAAGCGTCATAATGAGATCAACCATAACATACAAAGAGATAGACCAACTGGAGTACAATCAAAGGGGATATATATTGATGCTCTATGCAAAACATATGAACCAAGCA
ACAAAGAAGACACAACATCTTTAACATATGGACCTGCGTTCGACCTTCATCTAAGCCAAGCTAAGATCTGA
Protein sequenceShow/hide protein sequence
MTERDKTTYKNKKTEKKRIRDGATKKEALKKQKNKDTTKVEDSYEGDTEKIEEEEIENRESSSSKVNEEDESESRIESISIIKRNVDEERKQKRKKTAIKKVIVKQEIDK
GRNLRSKGSPDKSVGENDEELDELEDEEEEDGKEQLNQHDRHPNIQTRKDDEDDATWGQGPKGQSRNIIWALNKEPVVSQGRSNVDDTNEGDDIINEVMRSIDEIKIYET
LKRNNKGKNILKNDNSIIEIVGQLIEHKEMRIVPKMQPKRHNEINHNIQRDRPTGVQSKGIYIDALCKTYEPSNKEDTTSLTYGPAFDLHLSQAKI